CX671968

Overview
NameCX671968
Unique NameCX671968
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length778
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671968 vs. ExPASy Swiss-Prot
Match: NACA2_HUMAN (Nascent polypeptide-associated complex subunit alpha-2 OS=Homo sapiens GN=NACA2 PE=1 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 4.340e-30
Identity = 70/123 (56.91%), Postives = 94/123 (76.42%), Query Frame = -1
Query:  422 SRVTVKKSKNILFVISKPDVFKSPTTDTYVIFGEAKIEDLSSQLQTQAAEQFKAPD--LSHVVSKPESSAMAQ--DDEEVDETGVEPKDIELVMTQAGVSRAKAVKALKAADGDIVSAIMELT 778
            +RVT+ KSKNILFVI+K DV+KSP +D Y++FGEAKI+DLS Q Q  AAE+F+     + ++    ++  + +  ++EEVDETGVE KD++LVM+QA VSRAKAV+ALK    DIV+AIMELT
Sbjct:   92 TRVTIWKSKNILFVITKLDVYKSPASDAYIVFGEAKIQDLSQQAQLAAAEKFRVQGEAVGNIQENTQTPTVQEESEEEEVDETGVEVKDVKLVMSQANVSRAKAVRALKNNSNDIVNAIMELT 214          
BLAST of CX671968 vs. ExPASy Swiss-Prot
Match: NACA_EMENI (Nascent polypeptide-associated complex subunit alpha OS=Emericella nidulans GN=egd2 PE=3 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 2.154e-29
Identity = 73/135 (54.07%), Postives = 96/135 (71.11%), Query Frame = -1
Query:  422 SRVTVKKSKNILFVISKPDVFKSPTTDTYVIFGEAKIEDLSSQLQTQAAEQFKAP---------DLSHVVSK---PESSAMAQ----DDEEVDETGVEPKDIELVMTQAGVSRAKAVKALKAADGDIVSAIMELT 778
            +RVT+++ KNILFVI++PDV++SP+++T++IFGEAKIEDL+SQ Q  AA+Q  A          D  H   K   PE+ A  +    D EEVDETG+EPKDI+LVM QA VSR KAVKAL+  D DIV++IM L+
Sbjct:   68 TRVTLRRPKNILFVINQPDVYRSPSSNTWIIFGEAKIEDLNSQAQASAAQQLAAAEAAGEHAGHDHDHDKGKGKAPETEAKKEEEEDDGEEVDETGLEPKDIDLVMAQANVSRKKAVKALRENDNDIVNSIMALS 202          
BLAST of CX671968 vs. ExPASy Swiss-Prot
Match: NACA_ASPCL (Nascent polypeptide-associated complex subunit alpha OS=Aspergillus clavatus GN=egd2 PE=3 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 3.674e-29
Identity = 74/136 (54.41%), Postives = 95/136 (69.85%), Query Frame = -1
Query:  422 SRVTVKKSKNILFVISKPDVFKSPTTDTYVIFGEAKIEDLSSQLQTQAAEQFKAP------------DLSHVVSK-PESSAMAQ----DDEEVDETGVEPKDIELVMTQAGVSRAKAVKALKAADGDIVSAIMELT 778
            +RVT+++ KNILFVI++PDV++SPT++T++IFGEAKIEDL+SQ Q  AA+Q  A             D  H   K PE+ A  +    D EEVDETG+E KDIELVM QA VSR KAVKAL+  D DIV++IM L+
Sbjct:   68 TRVTLRRPKNILFVINQPDVYRSPTSNTWIIFGEAKIEDLNSQAQASAAQQLAAAEAAAGEHAGHDHDHDHGKGKAPETEAKKEEEEDDGEEVDETGLEAKDIELVMAQANVSRKKAVKALRENDNDIVNSIMALS 203          
BLAST of CX671968 vs. ExPASy Swiss-Prot
Match: NACA_CAEBR (Nascent polypeptide-associated complex subunit alpha OS=Caenorhabditis briggsae GN=CBG05114 PE=3 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 8.184e-29
Identity = 71/123 (57.72%), Postives = 85/123 (69.11%), Query Frame = -1
Query:  422 SRVTVKKSKNILFVISKPDVFKSPTTDTYVIFGEAKIEDLSSQLQTQAAEQFK----APDLSHVVSKPESSAMAQDDEEVDETGVEPKDIELVMTQAGVSRAKAVKALKAADGDIVSAIMELT 778
            SRV ++KSKNILFVI+KPDVFKSP +DTY+IFGEAKIEDL+   Q  A E  K    AP L  V           +D E D TG+E KDIELV++QA  +R KA++ALK AD DIV+AIM LT
Sbjct:   80 SRVCIRKSKNILFVINKPDVFKSPGSDTYIIFGEAKIEDLTQHAQMSAIENMKPTREAPQLKTVEEDD------NEDVEEDSTGIEEKDIELVISQANTTRNKAIRALKDADNDIVNAIMSLT 196          
BLAST of CX671968 vs. ExPASy Swiss-Prot
Match: NACA_BOTFB (Nascent polypeptide-associated complex subunit alpha OS=Botryotinia fuckeliana (strain B05.10) GN=egd2 PE=3 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 8.184e-29
Identity = 75/139 (53.96%), Postives = 93/139 (66.91%), Query Frame = -1
Query:  422 SRVTVKKSKNILFVISKPDVFKSPTTDTYVIFGEAKIEDLSSQLQTQAAEQFKAP-------------DLSH------VVSKPESSAMAQDD-EEVDETGVEPKDIELVMTQAGVSRAKAVKALKAADGDIVSAIMELT 778
            +RVT+++ KNILFVI++P+V+KSPT++TY++FGEAKIEDL+SQ Q  AA Q  A              D SH       V   E     +DD EEVD TG+E KDIELVMTQA VSR KAVKALK  D DIV++IM L+
Sbjct:   73 TRVTLRRPKNILFVINQPEVYKSPTSNTYIVFGEAKIEDLNSQAQASAAAQLAAQESHDHAGHDHSGHDHSHDHGKGKAVDTEEKKEEEEDDTEEVDATGLEDKDIELVMTQASVSRNKAVKALKENDNDIVNSIMALS 211          
BLAST of CX671968 vs. ExPASy Swiss-Prot
Match: NACA_NEOFI (Nascent polypeptide-associated complex subunit alpha OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=egd2 PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.069e-28
Identity = 73/136 (53.68%), Postives = 95/136 (69.85%), Query Frame = -1
Query:  422 SRVTVKKSKNILFVISKPDVFKSPTTDTYVIFGEAKIEDLSSQLQTQAAEQFKAP------------DLSHVVSK-PESSAMAQ----DDEEVDETGVEPKDIELVMTQAGVSRAKAVKALKAADGDIVSAIMELT 778
            +RVT+++ KNILFVI++PDV++SP+++T++IFGEAKIEDL+SQ Q  AA+Q  A             D  H   K PE+ A  +    D EEVDETG+E KDIELVM QA VSR KAVKAL+  D DIV++IM L+
Sbjct:   68 TRVTLRRPKNILFVINQPDVYRSPSSNTWIIFGEAKIEDLNSQAQASAAQQLAAAEAAAGEHAGHDHDHDHGKGKAPETEAKKEEEEDDGEEVDETGLEAKDIELVMAQANVSRKKAVKALRENDNDIVNSIMALS 203          
BLAST of CX671968 vs. ExPASy Swiss-Prot
Match: NACA_ASPFU (Nascent polypeptide-associated complex subunit alpha OS=Aspergillus fumigatus GN=egd2 PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.069e-28
Identity = 73/136 (53.68%), Postives = 95/136 (69.85%), Query Frame = -1
Query:  422 SRVTVKKSKNILFVISKPDVFKSPTTDTYVIFGEAKIEDLSSQLQTQAAEQFKAP------------DLSHVVSK-PESSAMAQ----DDEEVDETGVEPKDIELVMTQAGVSRAKAVKALKAADGDIVSAIMELT 778
            +RVT+++ KNILFVI++PDV++SP+++T++IFGEAKIEDL+SQ Q  AA+Q  A             D  H   K PE+ A  +    D EEVDETG+E KDIELVM QA VSR KAVKAL+  D DIV++IM L+
Sbjct:   68 TRVTLRRPKNILFVINQPDVYRSPSSNTWIIFGEAKIEDLNSQAQASAAQQLAAAEAAAGEHAGHDHDHDHGKGKAPETEAKKEEEEDDGEEVDETGLEAKDIELVMAQANVSRKKAVKALRENDNDIVNSIMALS 203          
BLAST of CX671968 vs. ExPASy Swiss-Prot
Match: NACA_COCIM (Nascent polypeptide-associated complex subunit alpha OS=Coccidioides immitis GN=EGD2 PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.823e-28
Identity = 69/135 (51.11%), Postives = 97/135 (71.85%), Query Frame = -1
Query:  422 SRVTVKKSKNILFVISKPDVFKSPTTDTYVIFGEAKIEDLSSQLQTQAAEQFKAPDLS---------HV----VSKPESSAMAQDDE---EVDETGVEPKDIELVMTQAGVSRAKAVKALKAADGDIVSAIMELT 778
            +RVT+++ KNILFVI++PDV++SP+++T++IFGEAKIEDL+SQ Q  AA+Q  A + +         H+       PE+    +++E   EVDETG+E KDIELVM QA VSR+KA+KALK  D DIV++IM L+
Sbjct:   70 TRVTLRRPKNILFVINQPDVYRSPSSNTWIIFGEAKIEDLNSQAQASAAQQLSAAEAAGNGEHAGHEHIDLGKGKAPETEKKEEEEEEEGEVDETGLEAKDIELVMAQANVSRSKAIKALKENDNDIVNSIMALS 204          
BLAST of CX671968 vs. ExPASy Swiss-Prot
Match: NACA_SCLS1 (Nascent polypeptide-associated complex subunit alpha OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=egd2 PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 3.110e-28
Identity = 75/140 (53.57%), Postives = 93/140 (66.43%), Query Frame = -1
Query:  422 SRVTVKKSKNILFVISKPDVFKSPTTDTYVIFGEAKIEDLSSQLQTQAAEQFKAP-------------DLSH-------VVSKPESSAMAQDD-EEVDETGVEPKDIELVMTQAGVSRAKAVKALKAADGDIVSAIMELT 778
            +RVT+++ KNILFVI+ P+V+KSPT++TY++FGEAKIEDL+SQ Q  AA Q  A              D SH       V +  E     +DD EEVD TG+E KDIELVMTQA VSR KAVKALK  D DIV++IM L+
Sbjct:   74 TRVTLRRPKNILFVINNPEVYKSPTSNTYIVFGEAKIEDLNSQAQASAAAQLAAQESHDHAGHDHSGHDHSHDHGKGKAVDTGDEKKEEEEDDTEEVDATGLEDKDIELVMTQASVSRNKAVKALKENDNDIVNSIMALS 213          
BLAST of CX671968 vs. ExPASy Swiss-Prot
Match: NACA_CAEEL (Nascent polypeptide-associated complex subunit alpha OS=Caenorhabditis elegans GN=Y65B4BR.5 PE=1 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 3.110e-28
Identity = 66/119 (55.46%), Postives = 83/119 (69.75%), Query Frame = -1
Query:  422 SRVTVKKSKNILFVISKPDVFKSPTTDTYVIFGEAKIEDLSSQLQTQAAEQFKAPDLSHVVSKPESSAMAQDDEEVDETGVEPKDIELVMTQAGVSRAKAVKALKAADGDIVSAIMELT 778
            SRV ++KSKNILFVI+KPDVFKSP +DTY+IFGEAKIEDL+   Q  A E  K    +  +   E       + + D TG+E KDIELV++QA  +R KA++ALK AD DIV+AIM LT
Sbjct:   78 SRVCIRKSKNILFVINKPDVFKSPGSDTYIIFGEAKIEDLTQHAQMSAIENLKPTREAPQLKTVEEDENEDVEFKEDSTGIEEKDIELVISQANTTRNKAIRALKEADNDIVNAIMSLT 196          
The following BLAST results are available for this feature:
BLAST of CX671968 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56
Match NameE-valueIdentityDescription
NACA2_HUMAN4.340e-3056.91Nascent polypeptide-associated complex subunit alp... [more]
NACA_EMENI2.154e-2954.07Nascent polypeptide-associated complex subunit alp... [more]
NACA_ASPCL3.674e-2954.41Nascent polypeptide-associated complex subunit alp... [more]
NACA_CAEBR8.184e-2957.72Nascent polypeptide-associated complex subunit alp... [more]
NACA_BOTFB8.184e-2953.96Nascent polypeptide-associated complex subunit alp... [more]
NACA_NEOFI1.069e-2853.68Nascent polypeptide-associated complex subunit alp... [more]
NACA_ASPFU1.069e-2853.68Nascent polypeptide-associated complex subunit alp... [more]
NACA_COCIM1.823e-2851.11Nascent polypeptide-associated complex subunit alp... [more]
NACA_SCLS13.110e-2853.57Nascent polypeptide-associated complex subunit alp... [more]
NACA_CAEEL3.110e-2855.46Nascent polypeptide-associated complex subunit alp... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_14B11_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-14B11-C22-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671968 ID=CX671968; Name=CX671968; organism=Citrus sinensis; type=EST; length=778bp
TTTTTTTTTTTTTTTTTACGAGAGTGCAAATATTATTTTCCCTTTATATT
ATTTTCCCTTTTCTTTTCCTTGTTTAATGTCGAATCGTTTACAAGGAGAG
AAATGGGATCAACCACTGAAATTTTTGTAACCATAATTGTAAATCATTTT
AGCAAGAATCCTTCAGTCGACCATTCAGAAAAGCCTGGTCTTGATACAAA
GGAACTTAGTCAGGAACCAGTCACATATGAAAGAAAAACAAGTAAATTGC
CCAGCCAAAGCAAAAGGAATCACAAACAGTTCCATTTCACAATCAACAGC
TTTGCAGATTCTCTCCTCTTCAATTCCCACAGACAATATTGGGTATTTGG
TAATAAAGAATACTGTGGCGTGAAATGTTTTCTTGTGAGCAGCACACAAA
CATCTAAGAAAACTCTCAGTTGGTAAGCTCCATGATAGCTGAAACTATGT
CCCCATCTGCAGCCTTCAGCGCTTTCACAGCCTTTGCCCTGGAGACTCCT
GCCTGTGTCATTACTAACTCTATGTCCTTAGGCTCAACCCCGGTCTCATC
TACTTCTTCATCGTCCTGAGCCATGGCTGATGACTCAGGTTTGGAGACCA
CGTGGCTGAGATCAGGAGCCTTAAATTGCTCTGCTGCCTGAGTCTGCAAT
TGTGAGCTCAAGTCCTCGATCTTTGCCTCACCAAAGATTACATATGTATC
TGTTGTCGGGCTCTTGAAAACATCCGGTTTTGAGATAACAAACAAGATAT
TCTTGCTCTTTTTGACGGTAACCCGGCT
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