CX671967

Overview
NameCX671967
Unique NameCX671967
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length866
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671967 vs. ExPASy Swiss-Prot
Match: NACA_USTMA (Nascent polypeptide-associated complex subunit alpha OS=Ustilago maydis GN=EGD2 PE=3 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 3.240e-24
Identity = 61/142 (42.96%), Postives = 91/142 (64.08%), Query Frame = 3
Query:  261 AMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTTDTYVIFGEAKIEDLSSQLQTQAAEQF---KAPDLSHVVSKPESSAMA----------QDDEEVDETGVEPKDIELVMTQAGVSRAKAVKALKAADGDIVSAIM 647
            A+  +G+K + G++RVT+++ +  L+VI++P+V+KS  +D Y++FGEAK ED+S   Q QAA+Q    +A +     S   SSA             DD  +DE GV+ KDI+LVM Q   SR KAVKALK ++GD+++AIM
Sbjct:   46 ALQGIGLKKVGGITRVTMRRPRGHLYVIAQPEVYKSSHSDVYIVFGEAKAEDMSQLAQAQAAQQMAQAEAQERLLAESLQNSSASGAEKKVEEEEEDDDSPIDEEGVDAKDIDLVMQQVSCSRRKAVKALKESNGDLINAIM 187          
BLAST of CX671967 vs. ExPASy Swiss-Prot
Match: NACA_CANAL (Nascent polypeptide-associated complex subunit alpha OS=Candida albicans GN=EGD2 PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.231e-23
Identity = 64/152 (42.11%), Postives = 96/152 (63.16%), Query Frame = 3
Query:  270 KLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTTDTYVIFGEAKIEDLSSQ-------------LQTQAAEQFKAPDLSH--VVSKPESSAMA--------QDDEEVDETGVEPKDIELVMTQAGVSRAKAVKALKAADGDIVSAIMELT 656
            KL +K I G+SRVT K+  N+++ I  PDV++S    TYV+FGEAK++D++ +             LQ  AA+  K  D S   + +  E +++         +D+ E+DETG++PKDIE+V+ Q  VSRAKAVKAL+  DGD+V+AIM+L+
Sbjct:   28 KLNLKQIKGISRVTFKQRGNLIYAIDSPDVYRS-AAGTYVVFGEAKVDDMNQRIAEAQAQQAQQEALQKAAADAGKTEDKSPEAITADLEKASLGDKKAEDEEEDEGEIDETGLDPKDIEIVVEQTQVSRAKAVKALRNHDGDMVNAIMDLS 178          
BLAST of CX671967 vs. ExPASy Swiss-Prot
Match: NACA_LODEL (Nascent polypeptide-associated complex subunit alpha OS=Lodderomyces elongisporus GN=EGD2 PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 2.100e-23
Identity = 62/155 (40.00%), Postives = 91/155 (58.71%), Query Frame = 3
Query:  270 KLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTTDTYVIFGEAKIEDLSSQLQTQAAEQFKAPDLSHVVS---------KPES-----------------SAMAQDDEEVDETGVEPKDIELVMTQAGVSRAKAVKALKAADGDIVSAIMELT 656
            KLG+K I G+SRVT K+  N+++ I  P+V++S    TYV+FGEAK++D++ ++    A+Q +   L    +          PE+                  A   D+EEVDETG+ PKDI+L++ Q  VSR  AVKALK  DGD+V+A+MEL+
Sbjct:   29 KLGLKQIKGISRVTFKQRGNLIYAIDAPEVYRSQA-GTYVVFGEAKVDDMNQRIAEAQAQQAQQEALQKAAADAGAAGDDKSPEAITADLEKASLQGGESNADAAEDDNEEVDETGINPKDIDLIVEQTRVSRGSAVKALKKHDGDMVNALMELS 182          
BLAST of CX671967 vs. ExPASy Swiss-Prot
Match: NACA_KLULA (Nascent polypeptide-associated complex subunit alpha OS=Kluyveromyces lactis GN=EGD2 PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 2.100e-23
Identity = 71/154 (46.10%), Postives = 89/154 (57.79%), Query Frame = 3
Query:  264 MLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTTDTYVIFGEAKIEDLSSQLQTQAAEQFKA-----PDLSHVVSKPESSAMAQ------------------DDEEVDETGVEPKDIELVMTQAGVSRAKAVKALKAADGDIVSAIMELT 656
            +LKLG+KPI GVSRVT KK    +F I +P+V+KS   + +V+FGEAK++D + +L  +A E  +      P     VSK   S  A                   DD EVDETG+   DIELVM QAGV RAKA KALK  D DIV+AIM L+
Sbjct:   24 ILKLGLKPIQGVSRVTFKKKDGQIFAIDRPEVYKSQGGN-FVVFGEAKVDDFTQRL-AKAQESLQQNEGVLPAGQDAVSKDPQSIQADMQAAADSATDKPSADDAVDDAEVDETGLNADDIELVMQQAGVPRAKAAKALKEHDSDIVNAIMALS 175          
BLAST of CX671967 vs. ExPASy Swiss-Prot
Match: NACA_BABDI (Nascent polypeptide-associated complex subunit alpha OS=Babesia divergens PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 4.679e-23
Identity = 64/151 (42.38%), Postives = 89/151 (58.94%), Query Frame = 3
Query:  270 KLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTTDTYVIFGEAKIEDLSSQLQTQAAEQFKAPDLSHVVSK------PESSAMAQDD----------------EEVDETGVEPKDIELVMTQAGVSRAKAVKALKAADGDIVSAIMELT 656
            KLGMKP+ GV++V +KKSK I FV++KPDV+K P +DTYVIFGEAK+ED+S     +AA++     LS  +         +SSA A                    + DE+ V   DI+LV++Q G +R +AV+AL    GDIV  IM+L+
Sbjct:   48 KLGMKPVDGVTKVCIKKSKQIYFVVNKPDVYKLPNSDTYVIFGEAKVEDMSQNSALEAAQRLS--QLSSALQAVGADRGTDSSAAAHASGHDHAHDHDHSHGDCASKADESSVNQSDIDLVVSQVGCTREQAVEALIKNKGDIVETIMQLS 196          
BLAST of CX671967 vs. ExPASy Swiss-Prot
Match: NACA_ASHGO (Nascent polypeptide-associated complex subunit alpha OS=Ashbya gossypii GN=EGD2 PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.361e-22
Identity = 64/143 (44.76%), Postives = 93/143 (65.03%), Query Frame = 3
Query:  270 KLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTTDTYVIFGEAKIEDLSSQL---QTQAAEQFKAP-----DLSHVVSKPES----SAMAQDDE--EVDETGVEPKDIELVMTQAGVSRAKAVKALKAADGDIVSAIMELT 656
            K  MKP+PG++RVT +K  N +F I  PDV+K+   + YV+FGE K++D + +L   Q QAA   K P     D++   + P +    +A  ++DE  +VDE+G++ +DIELVM QA VSR KAVKAL+  + DIV+AIM L+
Sbjct:   26 KFSMKPMPGITRVTFRKKNNQIFAIDNPDVYKTQGGN-YVVFGEPKVDDFTRRLARAQQQAASAAKDPQSIQADMAAAAAAPAAPAAPAAAPEEDEAGQVDESGLDGQDIELVMQQANVSRNKAVKALREHNSDIVNAIMSLS 167          
BLAST of CX671967 vs. ExPASy Swiss-Prot
Match: NACA_SCHPO (Nascent polypeptide-associated complex subunit alpha OS=Schizosaccharomyces pombe GN=egd2 PE=1 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 2.322e-22
Identity = 59/141 (41.84%), Postives = 89/141 (63.12%), Query Frame = 3
Query:  270 KLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTTDTYVIFGEAKIEDLSSQLQTQAAEQFKAPDLSHVVSKPESSAMAQ------------DDEEVDETGVEPKDIELVMTQAGVSRAKAVKALKAADGDIVSAIMELT 656
            KLG+K + G++RV +++ KNIL +I++P V+KS + + Y++ G+  +ED+++Q +     Q +A +     +  E S  AQ             ++ VDETGV+ KDIELVM QA VSRAKAV ALK  + D+V+AIM LT
Sbjct:   33 KLGLKRVEGITRVAMRRPKNILLIINEPIVYKS-SNNAYIVLGKVTVEDMAAQARAFNESQKQATETKEEAAITEESGDAQPADTAKIEESFEQEKAVDETGVDAKDIELVMAQANVSRAKAVTALKENNSDVVNAIMSLT 172          
BLAST of CX671967 vs. ExPASy Swiss-Prot
Match: NACA_DEBHA (Nascent polypeptide-associated complex subunit alpha OS=Debaryomyces hansenii GN=EGD2 PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 5.173e-22
Identity = 60/154 (38.96%), Postives = 92/154 (59.74%), Query Frame = 3
Query:  270 KLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTTDTYVIFGEAKIEDLSSQLQTQAAEQFKAPDLSHVVS---------KPESSAMAQ----------------DDEEVDETGVEPKDIELVMTQAGVSRAKAVKALKAADGDIVSAIMELT 656
            KL +K I G++RVT K+  N+++ I +PDVF+S +  TYV+FGEAK++D++ ++     +Q +   LS             K + +  A                 DD EVDE+G++ KDI++++ Q  VSRAKAVKAL+  DGD+V+AIMEL+
Sbjct:   28 KLNLKQIKGITRVTFKQRGNLIYAIDQPDVFRS-SAGTYVVFGEAKVDDMNKRIAEAQQQQAQQDALSKAAGETGEAGEEDKSQDAITADLEKASLNTNKIEEEEADDGEVDESGLDAKDIDIIVEQTQVSRAKAVKALRVHDGDMVNAIMELS 180          
BLAST of CX671967 vs. ExPASy Swiss-Prot
Match: NACA_PICST (Nascent polypeptide-associated complex subunit alpha OS=Pichia stipitis GN=EGD2 PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.568e-21
Identity = 59/150 (39.33%), Postives = 92/150 (61.33%), Query Frame = 3
Query:  270 KLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTTDTYVIFGEAKIEDLSSQLQ----TQAAEQFKAPDLSHVVSKPESSAMA-----------------QDDEEVDETGVEPKDIELVMTQAGVSRAKAVKALKAADGDIVSAIMELT 656
            KL +K I G++RVT K+  N+++ I  PDV++S    TYV+FGEAK++D++ ++      QAAE       +H   + + S  A                 +++ EVDE+G++ KDI++++ Q  VSRAKAVKAL+  DGD+V+AIMEL+
Sbjct:   28 KLNLKQIKGITRVTFKQRGNLIYAIDAPDVYRS-AAGTYVVFGEAKVDDMNQRIADAQAAQAAETDAHAGHTHSHGEEDKSPEAITADLEKASLTEKIEEEEEEGEVDESGLDAKDIDIIVEQTQVSRAKAVKALRKHDGDMVNAIMELS 176          
BLAST of CX671967 vs. ExPASy Swiss-Prot
Match: NACA_DICDI (Nascent polypeptide-associated complex subunit alpha OS=Dictyostelium discoideum GN=nacA PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.664e-20
Identity = 50/140 (35.71%), Postives = 85/140 (60.71%), Query Frame = 3
Query:  261 AMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTTDTYVIFGEAKIEDLSSQLQTQAAEQFKAPDLSHVVSKPESSAMAQDDEEV--------DETGVEPKDIELVMTQAGVSRAKAVKALKAADGDIVSAIMELT 656
            AM KLG+ P+  + RVT+K+ + +L V+++P+V+ SP+ +TYV+FG+   +D++S+LQ    +      +   +  P +   +++ EE+        D  GV PKD+E+VM +   SR K V+ L A   D+VSA++ELT
Sbjct:   19 AMKKLGLAPVSDIFRVTIKQKEGVLVVVAEPEVYASPSGETYVVFGDHSFDDIASRLQKAVPKANVDDIVKAAMPAPTAVKESEESEEIVAQAVDSFDYKGVNPKDVEVVMKETKASREKVVETLIATKNDLVSAVLELT 158          
The following BLAST results are available for this feature:
BLAST of CX671967 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56
Match NameE-valueIdentityDescription
NACA_USTMA3.240e-2442.96Nascent polypeptide-associated complex subunit alp... [more]
NACA_CANAL1.231e-2342.11Nascent polypeptide-associated complex subunit alp... [more]
NACA_LODEL2.100e-2340.00Nascent polypeptide-associated complex subunit alp... [more]
NACA_KLULA2.100e-2346.10Nascent polypeptide-associated complex subunit alp... [more]
NACA_BABDI4.679e-2342.38Nascent polypeptide-associated complex subunit alp... [more]
NACA_ASHGO1.361e-2244.76Nascent polypeptide-associated complex subunit alp... [more]
NACA_SCHPO2.322e-2241.84Nascent polypeptide-associated complex subunit alp... [more]
NACA_DEBHA5.173e-2238.96Nascent polypeptide-associated complex subunit alp... [more]
NACA_PICST2.568e-2139.33Nascent polypeptide-associated complex subunit alp... [more]
NACA_DICDI1.664e-2035.71Nascent polypeptide-associated complex subunit alp... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_14B11_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-14B11-C22-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671967 ID=CX671967; Name=CX671967; organism=Citrus sinensis; type=EST; length=866bp
TTTCAAGGTCTTGAGGAATTTGCCTCTGTTTATCCCCAAGAACAGCCATG
ACTGCTCAGACCCAAGAAGAGCTTCTCGCCTCTCTTCTCGAACAGCAAAA
AATCGATGATGATAAGCCTGTTGTAGAAGATGATGAAGATGAAGACGAGG
ATGAGGATGAAGATGATGAGAAAGACGAAGATGAAGCTGACGAGGGACAC
CGAGATGGAGAGGCAGGTGGTAGGTCAAAACAGAGCAGAAGTGAAAAGAA
GAGTCGCAAAGCAATGTTAAAGCTTGGAATGAAACCTATCCCTGGTGTTA
GCCGGGTTACCGTCAAAAAGAGCAAGAATATCTTGTTTGTTATCTCAAAA
CCGGATGTTTTCAAGAGCCCGACAACAGATACATATGTAATCTTTGGTGA
GGCAAAGATCGAGGACTTGAGCTCACAATTGCAGACTCAGGCAGCAGAGC
AATTTAAGGCTCCTGATCTCAGCCACGTGGTCTCCAAACCTGAGTCATCA
GCCATGGCTCAGGACGATGAAGAAGTAGATGAGACCGGGGTTGAGCCTAA
GGACATAGAGTTAGTAATGACACAGGCAGGAGTCTCCAGGGCAAAGGCTG
TGAAAGCGCTGAAGGCTGCAGATGGGGACATAGTTTCAGCTATCATGGAG
CTTACCAACTGAGAGTTTTCTTAGATGTTTGTGTGCTGCTCACAAGAAAA
CATTTCACGCCACAGTATTCTTTATTACCAAATACCCAATATTGTCTGTG
GGAATTGAAGAGGAGAGAATCTGCAAAGCTGTTGATTGTGAAATGGAACT
GTTTGTGATTCCTTTTGCTTTGGCTGGGCAATTTACTTGTTTTTCTTTCA
TATGTGACTGGTTCCT
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