CX671886

Overview
NameCX671886
Unique NameCX671886
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length843
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX671886 vs. ExPASy Swiss-Prot
Match: CYT1_HORVU (Cysteine proteinase inhibitor OS=Hordeum vulgare GN=ICY PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.355e-11
Identity = 32/72 (44.44%), Postives = 48/72 (66.67%), Query Frame = -1 
Query:  217 MEIGQFAVTEYNKRSKSALKFENVEKAWTQVVSGTNYRLILVVKDGPSTKKFEAVVWEKPWEHFKSLTSFKP 432
            +E+ +FAV E+N ++ + L+FE + K   QVV+G  +   + VK+G + K +EA VWEK WE+FK L  FKP
Sbjct:   34 IELARFAVAEHNAKANALLEFEKLVKVRQQVVAGCMHYFTIEVKEGGAKKLYEAKVWEKAWENFKQLQEFKP 105
[Close]
BLAST of CX671886 vs. ExPASy Swiss-Prot
Match: CYT7_ORYSJ (Putative cysteine proteinase inhibitor 7 OS=Oryza sativa subsp. japonica GN=Os03g0210100 PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.781e-11
Identity = 44/119 (36.97%), Postives = 68/119 (57.14%), Query Frame = -1 
Query:  475 MNQRLCCLIVLFLSVVPLLAAGDRKGAFVGGWMPIKDPKEKHVMEIGQFAVTEYNKR-SKSALKFESVEEGETQVVSGTNYRLIL-VVKDGPSTKKFEAVVFEKQ-WEHFKSLTSFKPM 822
            M  R   L++  ++VV ++A      A VG W P+ D  + HV E+G++AV E ++  +   L FE V +GE QVV+G NYRL L     G    ++EAVV+E+    + + L SF+P+
Sbjct:    1 MTMRTSSLLLAAVAVVAIVAGAT--AATVGSWEPV-DINDPHVQELGRWAVAEEDRGVAAGGLTFERVTDGEKQVVAGVNYRLTLEASSSGAKDGRYEAVVYEQDPRSNARKLVSFEPI 116
The following BLAST results are available for this feature:
BLAST of CX671886 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
CYT1_HORVU1.355e-1144.44Cysteine proteinase inhibitor OS=Hordeum vulgare G... [more]
CYT7_ORYSJ8.781e-1136.97Putative cysteine proteinase inhibitor 7 OS=Oryza ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_13G02_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-13G02-M3-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671886 ID=CX671886; Name=CX671886; organism=Citrus sinensis; type=EST; length=843bp
GTTGACACACACAATAACTTTTATTGATTTATTTCCTTTTTCAGGAAAAT
ACTTGGCTCAAAAGTAAACAAAAAGATCTCTTGTACATCTCAAGAAATCT
TATAAGTTGAACTAAAACAGACTAAGACATTGCCATGATTGATAGCTAAT
AGTATACCTATCATTTATTTAACAATTACATGCATTTGTTATTTGTTAAA
CACCCTATTTAACCATAGGCTTAAACGAGGTGAGACTCTTGAAATGCTCC
CATGGCTTCTCCCAAACGACAGCTTCAAATTTCTTGGTCGAAGGTCCGTC
CTTGACGACCAAGATCAGCCGGTAATTGGTGCCGGAAACCACCTGAGTCC
AGGCCTTCTCCACGTTCTCGAACTTCAACGCGCTCTTTGACCGTTTGTTG
TACTCCGTCACCGCGAACTGCCCGATCTCCATCACGTGCTTCTCCGTGGG
GTCTATCGGAGTCCATCCCCCAAGCATAGGCTTAAACGAGGTGAGACTCT
TGAAATGCTCCCATTGCTTCTCGAAAACGACAGCTTCAAATTTCTTGGTC
GAAGGTCCGTCCTTGACGACCAAGATCAGCCGGTAATTGGTGCCGGAAAC
CACCTGAGTCTCGCCCTCCTCCACGCTCTCGAACTTCAACGCGCTCTTTG
ACCGTTTGTTGTACTCCGTCACCGCGAACTGCCCGATCTCCATCACGTGC
TTCTCCTTGGGGTCCTTTATCGGCATCCATCCCCCAACAAACGCTCCTTT
ACGGTCGCCGGCGGCCAGGAGAGGGACCACGGAGAGAAAGAGAACAATAA
GACAGCAAAGACGTTGGTTCATTTTCGTTGTTTTGGTAACCGT
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