CX671876

Overview
NameCX671876
Unique NameCX671876
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length758
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671876 vs. ExPASy Swiss-Prot
Match: PPDK_RHIME (Pyruvate, phosphate dikinase OS=Rhizobium meliloti GN=ppdK PE=3 SV=2)

HSP 1 Score: 205.682 bits (522), Expect = 2.276e-52
Identity = 111/202 (54.95%), Postives = 131/202 (64.85%), Query Frame = -1
Query:  123 VFPEIMVPLVGTPQELGHQISLIRNVATKVFSEMGSSLDYKVGTMIEIPRAALVADEIAKEAEFFSFGTNDLTQMTFGYSRDDVGKFLPVYLSKGILQSDPFEVWHTPLKLKVK*RKKCSIPRIVT*SNCLQVLDQKGVGQLIKIATERGRAARPSLKVGICGEHGGEPSSVAFFAEAGLDYVSCSPFRVPIARLAAAQVAV 728
            V PEIMVPLVG   EL +  + I  VA +V  E G ++DY +GTMIE+PRAAL AD IA+ A+FFSFGTNDLTQ TFG SRDD   FL  Y  KGI++ DPF                               LD +GVG+LI+IA ERGR  +  LK+GICGEHGG+P+S+ F  EAGLDYVSCSPFRVPIARLAAAQ  +
Sbjct:  712 VVPEIMVPLVGLRAELDYVKARIEAVAKEVIGEAGVNIDYLIGTMIELPRAALRADTIAESADFFSFGTNDLTQTTFGISRDDAALFLATYQQKGIIEQDPF-----------------------------VSLDFEGVGELIQIAAERGRRTKNGLKLGICGEHGGDPASIRFCEEAGLDYVSCSPFRVPIARLAAAQATI 884          
BLAST of CX671876 vs. ExPASy Swiss-Prot
Match: PPDK_GIALA (Pyruvate, phosphate dikinase OS=Giardia lamblia PE=3 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 8.376e-47
Identity = 98/212 (46.23%), Postives = 136/212 (64.15%), Query Frame = -1
Query:  123 AVSMSTHRFKVFPEIMVPLVGTPQELGHQISLIRNVATKVFSEMGSSLDYKVGTMIEIPRAALVADEIAKEAEFFSFGTNDLTQMTFGYSRDDVGKFLPVYLSKGILQSDPFEVWHTPLKLKVK*RKKCSIPRIVT*SNCLQVLDQKGVGQLIKIATERGRAARPSLKVGICGEHGGEPSSVAFFAEAGLDYVSCSPFRVPIARLAAAQVAV 758
            A  +S     V PEIM+P++ +  E+    +L+  VA  VF E G+++DY+VGTMIE+PRA ++AD+IA+ A++FSFGTNDLTQ TFG SRDD GKF+P Y+ +GI + DPF                               LDQ+GVG L+K+A E GR+ R  +K+GICGE   +P+S+ F  + GL+YVSCSP+RVP+AR+AAA  A+
Sbjct:  697 ACIVSREGVTVKPEIMIPVLFSENEMEIMHALVNRVAASVFKEHGTTVDYEVGTMIELPRACVMADKIAQTAQYFSFGTNDLTQTTFGISRDDAGKFIPKYIDRGIFKVDPF-----------------------------VTLDQQGVGALMKMAIEGGRSTRTDMKIGICGEQ-TDPASILFLHKIGLNYVSCSPYRVPVARVAAAIAAI 878          
BLAST of CX671876 vs. ExPASy Swiss-Prot
Match: PPDK_RICPR (Pyruvate, phosphate dikinase OS=Rickettsia prowazekii GN=ppdK PE=3 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 5.618e-43
Identity = 88/199 (44.22%), Postives = 123/199 (61.81%), Query Frame = -1
Query:  123 EIMVPLVGTPQELGHQISLIRNVATKVFSEMGSSLDYKVGTMIEIPRAALVADEIAKEAEFFSFGTNDLTQMTFGYSRDDVGKFLPVYLSKGILQSDPFEVWHTPLKLKVK*RKKCSIPRIVT*SNCLQVLDQKGVGQLIKIATERGRAARPSLKVGICGEHGGEPSSVAFFAEAGLDYVSCSPFRVPIARLAAAQVAV 719
            E+M+PL+    E+      I  V  ++         + +GTMIE+PRAAL + +IAKE ++FSFGTNDLTQ T+G SRDD+  FLP YL + I +SDPF                               LD++GVG+LI+IA +RG+++  +LK+G CGEH G P+S+AFF +A L+YVSCSP+R+PIAR+AAAQ  +
Sbjct:  707 ELMIPLISNVAEIKKLKMYIYEVVQELEQRYSYKFSFTLGTMIELPRAALESKKIAKEVDYFSFGTNDLTQTTYGISRDDIASFLPYYLEEKIFESDPFTT-----------------------------LDEEGVGELIEIAIKRGKSSNANLKLGACGEHAGNPTSIAFFHKANLNYVSCSPYRIPIARIAAAQAKI 876          
BLAST of CX671876 vs. ExPASy Swiss-Prot
Match: PPDK_RICTY (Pyruvate, phosphate dikinase OS=Rickettsia typhi GN=ppdK PE=3 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.252e-42
Identity = 89/199 (44.72%), Postives = 122/199 (61.31%), Query Frame = -1
Query:  123 EIMVPLVGTPQELGHQISLIRNVATKVFSEMGSSLDYKVGTMIEIPRAALVADEIAKEAEFFSFGTNDLTQMTFGYSRDDVGKFLPVYLSKGILQSDPFEVWHTPLKLKVK*RKKCSIPRIVT*SNCLQVLDQKGVGQLIKIATERGRAARPSLKVGICGEHGGEPSSVAFFAEAGLDYVSCSPFRVPIARLAAAQVAV 719
            E+M+PL+    E+      I  V  K+         + +GTMIE+PRAAL + +IAKE ++FSFGTNDLTQ T+G SRDD+  FLP YL + I +SDPF                               LD++GVG+LIKIA +RG+++  +LK+G CGEH G P+S+AFF +  L+YVSCSP+R+PIAR+AAAQ  +
Sbjct:  707 ELMIPLISNVAEIKKLKMDIYAVVKKLEQRYSYKFSFTLGTMIELPRAALGSKKIAKEVDYFSFGTNDLTQTTYGISRDDIASFLPYYLEEKIFESDPFTT-----------------------------LDEEGVGELIKIAIKRGKSSNANLKLGACGEHAGNPTSIAFFHKMNLNYVSCSPYRIPIARIAAAQAKI 876          
BLAST of CX671876 vs. ExPASy Swiss-Prot
Match: PPDK_RICBR (Pyruvate, phosphate dikinase OS=Rickettsia bellii (strain RML369-C) GN=ppdK PE=3 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 2.135e-42
Identity = 87/199 (43.72%), Postives = 122/199 (61.31%), Query Frame = -1
Query:  123 EIMVPLVGTPQELGHQISLIRNVATKVFSEMGSSLDYKVGTMIEIPRAALVADEIAKEAEFFSFGTNDLTQMTFGYSRDDVGKFLPVYLSKGILQSDPFEVWHTPLKLKVK*RKKCSIPRIVT*SNCLQVLDQKGVGQLIKIATERGRAARPSLKVGICGEHGGEPSSVAFFAEAGLDYVSCSPFRVPIARLAAAQVAV 719
            E+M+PL+    E+      I  +  ++         + +GTMIE+PRAAL + +IA+E ++FSFGTNDLTQ T+G SRDD+  FLP YL + I +SDPF                               LD++GVG+LI+IA +RG+++ PSLK+G CGEH G P+S+ FF +  LDYVSCSP+R+PIAR+AAAQ  +
Sbjct:  706 ELMIPLISNVNEIKKLKGDIYEMIHELEERYEHKFSFSLGTMIELPRAALNSKKIAEEVDYFSFGTNDLTQTTYGISRDDIASFLPYYLEERIFESDPFTT-----------------------------LDEEGVGELIEIAIKRGKSSNPSLKLGACGEHAGHPASIEFFHKMNLDYVSCSPYRIPIARIAAAQAKI 875          
BLAST of CX671876 vs. ExPASy Swiss-Prot
Match: PPDK_RICCN (Pyruvate, phosphate dikinase OS=Rickettsia conorii GN=ppdK PE=3 SV=2)

HSP 1 Score: 167.162 bits (422), Expect = 8.970e-41
Identity = 87/199 (43.72%), Postives = 119/199 (59.80%), Query Frame = -1
Query:  123 EIMVPLVGTPQELGHQISLIRNVATKVFSEMGSSLDYKVGTMIEIPRAALVADEIAKEAEFFSFGTNDLTQMTFGYSRDDVGKFLPVYLSKGILQSDPFEVWHTPLKLKVK*RKKCSIPRIVT*SNCLQVLDQKGVGQLIKIATERGRAARPSLKVGICGEHGGEPSSVAFFAEAGLDYVSCSPFRVPIARLAAAQVAV 719
            E+M+PL+    E+      I  V  K+         + +GTMIE+PRAAL + +IAKE ++FSFGTNDLTQ T+G SRDD+  FLP YL + I +SDPF                               LD++GVG+LI IA +RG+++  +LK+G CGEH G P+S+ FF    L+YVSCSP+R+PIAR+AAAQ  +
Sbjct:  706 ELMIPLISNVGEIQKLKMDIYAVIEKLEQRYRYKFSFTLGTMIELPRAALGSKKIAKEVDYFSFGTNDLTQTTYGISRDDIASFLPYYLEEKIFESDPFTT-----------------------------LDEEGVGELIDIAIKRGKSSNANLKLGACGEHAGNPASIEFFHRMNLNYVSCSPYRIPIARIAAAQAKI 875          
BLAST of CX671876 vs. ExPASy Swiss-Prot
Match: PPDK_RICFE (Pyruvate, phosphate dikinase OS=Rickettsia felis GN=ppdK PE=3 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 3.409e-40
Identity = 85/199 (42.71%), Postives = 120/199 (60.30%), Query Frame = -1
Query:  123 EIMVPLVGTPQELGHQISLIRNVATKVFSEMGSSLDYKVGTMIEIPRAALVADEIAKEAEFFSFGTNDLTQMTFGYSRDDVGKFLPVYLSKGILQSDPFEVWHTPLKLKVK*RKKCSIPRIVT*SNCLQVLDQKGVGQLIKIATERGRAARPSLKVGICGEHGGEPSSVAFFAEAGLDYVSCSPFRVPIARLAAAQVAV 719
            E+M+PL+    E+      I  V  ++         + +GTMIE+PRAAL + +IAKE ++FSFGTNDLTQ T+G SRDD+  FLP YL + I +SDPF                               LD++GVG+LI+IA +RG+++  +LK+G CGEH G P+S+ FF    L+YVSCSP+R+PIAR+A+AQ  +
Sbjct:  706 ELMMPLISNVGEIKKLKMDIYEVIEELEQRYRYKFSFMLGTMIELPRAALGSKKIAKEVDYFSFGTNDLTQTTYGISRDDIASFLPYYLEEKIFESDPFTT-----------------------------LDEEGVGELIEIALKRGKSSNANLKLGACGEHAGNPASIEFFHRMNLNYVSCSPYRIPIARIASAQAKI 875          
BLAST of CX671876 vs. ExPASy Swiss-Prot
Match: PPDK_ENTHI (Pyruvate, phosphate dikinase OS=Entamoeba histolytica GN=PPDK PE=3 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 3.769e-39
Identity = 94/204 (46.08%), Postives = 122/204 (59.80%), Query Frame = -1
Query:  123 EIMVPLVGTPQELGHQISLIRNVATKVFSEM----GSSLDYKVGTMIEIPRAALVADEIAKEAEFFSFGTNDLTQMTFGYSRDDV-GKFLPVYLSKGILQSDPFEVWHTPLKLKVK*RKKCSIPRIVT*SNCLQVLDQKGVGQLIKIATERGRAARPSLKVGICGEHGGEPSSVAFFAEAGLDYVSCSPFRVPIARLAAAQVAV 719
            EIM+P V    EL   I+L +NV   V  E+    G  + +  GTM+E  RAAL AD+IA EA FFSFGTNDLTQ TF YSR+D   KF+P Y+   IL ++PFE+                             LD+ GVG++++IA  +GR  RP L VGICGEHGGEPSS+ +    GL+YVSCS +R+P+AR+AAAQ  +
Sbjct:  708 EIMIPNVTEVNEL---INLRKNVLEPVHEEVEKKYGIKVPFSYGTMVECVRAALTADKIATEASFFSFGTNDLTQGTFSYSREDSENKFIPKYVELKILPANPFEI-----------------------------LDRPGVGEVMRIAVTKGRQTRPELLVGICGEHGGEPSSIEWCHMIGLNYVSCSSYRIPVARIAAAQAQI 879          
BLAST of CX671876 vs. ExPASy Swiss-Prot
Match: PPDK_TREPA (Pyruvate, phosphate dikinase OS=Treponema pallidum GN=ppdK PE=3 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 6.017e-37
Identity = 89/220 (40.45%), Postives = 121/220 (55.00%), Query Frame = -1
Query:  123 MSTHRFKVFPEIMVPLVGTPQEL----------GHQISLIRNVATKV-FSEMGSSLDYKVGTMIEIPRAALVADEIAKEAEFFSFGTNDLTQMTFGYSRDDVGKFLPVYLSKGILQSDPFEVWHTPLKLKVK*RKKCSIPRIVT*SNCLQVLDQKGVGQLIKIATERGRAARPSLKVGICGEHGGEPSSVAFFAEAGLDYVSCSPFRVPIARLAAAQVAV 749
            +   +  V+PEIM+P+V   +EL          GH    I ++  +V  +     +DYKVG MIE+P AAL ADEIA+ A+FFSFGTNDLTQ T G SRDD   F+P Y    ++  +PF                              +LD + V +LI++A +RGR ARP +++G+CGEHG    ++ F  E GLDYVSCS + VPIA LA AQ  +
Sbjct:  686 LQKEKISVYPEIMIPIVMNCRELKQIVYGKKIEGHAYQGIGSIEEEVRLALKAKEVDYKVGAMIELPAAALSADEIARYAQFFSFGTNDLTQTTLGLSRDDFNTFMPDYTMYDLVDGNPF-----------------------------AILDAR-VRELIEVAMQRGRLARPDIQLGLCGEHGSRSENIRFCMEVGLDYVSCSSYSVPIALLAIAQAEI 875          
The following BLAST results are available for this feature:
BLAST of CX671876 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 19
Match NameE-valueIdentityDescription
PPDK_RHIME2.276e-5254.95Pyruvate, phosphate dikinase OS=Rhizobium meliloti... [more]
PPDK_GIALA8.376e-4746.23Pyruvate, phosphate dikinase OS=Giardia lamblia PE... [more]
PPDK_RICPR5.618e-4344.22Pyruvate, phosphate dikinase OS=Rickettsia prowaze... [more]
PPDK_RICTY1.252e-4244.72Pyruvate, phosphate dikinase OS=Rickettsia typhi G... [more]
PPDK_RICBR2.135e-4243.72Pyruvate, phosphate dikinase OS=Rickettsia bellii ... [more]
PPDK_RICCN8.970e-4143.72Pyruvate, phosphate dikinase OS=Rickettsia conorii... [more]
PPDK_RICFE3.409e-4042.71Pyruvate, phosphate dikinase OS=Rickettsia felis G... [more]
PPDK_ENTHI3.769e-3946.08Pyruvate, phosphate dikinase OS=Entamoeba histolyt... [more]
PPDK_TREPA6.017e-3740.45Pyruvate, phosphate dikinase OS=Treponema pallidum... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS10_13F09_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-13F09-K17-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671876 ID=CX671876; Name=CX671876; organism=Citrus sinensis; type=EST; length=758bp
TTTTTTTTTACTTTCTTTTAGCAATTCTTATATGCAGTTCTTTATAGTAG
TTATTATTTGTATGTGCCGCCTGCGAAGCAAATTATTTACAAATGCAGCG
AGTCAGCTGAAAATATCGTTCACACGGCGACTTGAGCAGCTGCTAGCCTT
GCAATTGGAACCCTGAATGGAGAACATGAAACATAGTCAAGTCCAGCTTC
TGCAAAAAATGCAACTGAAGAAGGCTCTCCCCCATGCTCTCCACATATCC
CCACCTTTAAGCTAGGCCTAGCCGCACGGCCCCTTTCTGTGGCAATCTTG
ATGAGTTGGCCTACGCCTTTCTGATCAAGAACCTGCAAGCAATTGCTTTA
AGTGACTATCCTAGGAATCGAACATTTCTTCCTTCACTTTACCTTCAACT
TGAGAGGGGTATGCCAAACCTCGAATGGGTCACTTTGCAGAATGCCTTTG
GATAGGTATACAGGAAGGAACTTGCCAACGTCATCTCTACTGTACCCGAA
TGTCATTTGTGTTAGGTCATTGGTTCCAAAGGAGAAGAACTCTGCTTCCT
TTGCAATCTCATCTGCCACCAGGGCAGCTCTTGGGATCTCAATCATGGTC
CCGACCTTGTAGTCTAAGGAGGAACCCATCTCGGAGAACACTTTCGTTGC
AACATTCCGTATTAAACTAATTTGATGTCCTAGTTCCTGAGGTGTTCCAA
CAAGGGGAACCATTATCTCTGGAAAAACTTTAAATCTATGGGTGCTCATA
GAAACTGC
back to top