CX671839

Overview
NameCX671839
Unique NameCX671839
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length806
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671839 vs. ExPASy Swiss-Prot
Match: PTGR1_HUMAN (Prostaglandin reductase 1 OS=Homo sapiens GN=PTGR1 PE=1 SV=2)

HSP 1 Score: 172.555 bits (436), Expect = 2.357e-42
Identity = 103/249 (41.37%), Postives = 139/249 (55.82%), Query Frame = 2
Query:   65 LVRNKQVILKDFVSGFPKETDMYMTESSIELKVPKGSNGVLLKNLYLSCDPYMRPRMTYIEGSYVESFKPGLPISGYGVAKVLDSENPEFSKGDLVWGMTGWEEYSLITAPYLFKIQHT---DVPLSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRIA 802
            +VR K   LK    G+P  +D  +  + +    P  +  VLL+ L+L+ DPYMR           +  K G  + G  VAKV++S+N    KG +V    GW  +S+     L K+       +PLS   G +GMPG+TAY G  E+C  K GE V ++AA+GAVG +VGQ AKL GC VVG+ GS +KV  L+ K GFD  FNYK    L   LK+  P+G D YF+NVGG+  + V+  MK  GRIA
Sbjct:    1 MVRTKTWTLKKHFVGYPTNSDFELKTAELP---PLKNGEVLLEALFLTVDPYMRVA--------AKRLKEGDTMMGQQVAKVVESKNVALPKGTIVLASPGWTTHSISDGKDLEKLLTEWPDTIPLSLALGTVGMPGLTAYFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAVGSDEKVAYLQ-KLGFDVVFNYKTVESLEETLKKASPDGYDCYFDNVGGEFSNTVIGQMKKFGRIA 237          
BLAST of CX671839 vs. ExPASy Swiss-Prot
Match: YNCB_ECOLI (Putative NADP-dependent oxidoreductase yncB OS=Escherichia coli (strain K12) GN=yncB PE=3 SV=3)

HSP 1 Score: 162.54 bits (410), Expect = 2.439e-39
Identity = 93/243 (38.27%), Postives = 134/243 (55.14%), Query Frame = 2
Query:   71 RNKQVILKDFVSGFPKETDMYMTESSIELKVPKGSNGVLLKNLYLSCDPYMRPRMTYIEGSYVESFKPGLPISGYGVAKVLDSENPEFSKGDLVWGMTGWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRI 799
            RN++ +L     G P   +  + E  +      G   VLL+ +YLS DPYMR RM+  E SY      G  + G  V++V++S +P++  GD V G +GW++Y + +   L K+       S+  G+LGMPG TAY+G  ++   K GE + ++AA+G VG  VGQ  KL GC VVG AG  +K        GFD   ++  + D    L +  P+GID+Y+ENVGGK  DAVLP +    RI
Sbjct:    7 RNRRWVLASRPHGAPVPENFRLEEDDV---ATPGEGQVLLRTVYLSLDPYMRGRMSD-EPSYSPPVDIGGVMVGGTVSRVVESNHPDYQSGDWVLGYSGWQDYDISSGDDLVKLGDHPQNPSWSLGVLGMPGFTAYMGLLDIGQPKEGETLVVAAATGPVGATVGQIGKLKGCRVVGVAGGAEKCRHATEVLGFDVCLDHHAD-DFAEQLAKACPKGIDIYYENVGGKVFDAVLPLLNTSARI 244          
BLAST of CX671839 vs. ExPASy Swiss-Prot
Match: PTGR2_BOVIN (Prostaglandin reductase 2 OS=Bos taurus GN=PTGR2 PE=2 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 3.530e-30
Identity = 87/239 (36.40%), Postives = 128/239 (53.56%), Query Frame = 2
Query:  104 SGFPKETDMYMTESSIELKVPKGSNGVLLKNLYLSCDPYMRPRMTYIEGS-YVESFKPGLPISGYGVAKVLDSENPEFSKGDLVWGMTG-WEEYSLITAPYLFKI--QHTDVPLSYYTGILGMPGMTAYVGFYEV--CSAKHGECVFISAASGAVGQLVGQFAKLLGCY-VVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRI 799
            +G P   +  + E ++   V +G   V ++ LYLS DPYMR RM    GS Y+  ++    + G GV  + +S++  F KGD V      W+   ++    L K+  Q  D  LSY+ G +GMPG+T+ +G  E    +A   + + +S A+GA G L GQ  +LLGC  VVG  G+ +K   L ++ GFD A NYKE  ++   L +  P G+DVYF+NVGG   D V+  M     I
Sbjct:   15 NGHPVAENFRVEEVNLPDCVNEGQ--VQVRTLYLSVDPYMRCRMNEDTGSDYITPWQLSQVVDGGGVGIIEESKHTNFMKGDFVTSFYWPWQTKVILDGNILEKVDPQLVDGHLSYFLGAIGMPGLTSLIGVQEKGHITAGSNQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGTPEKCLFLTSELGFDAAINYKE-GNVAEQLHKLCPAGVDVYFDNVGGDISDTVISQMNQNSHI 250          
BLAST of CX671839 vs. ExPASy Swiss-Prot
Match: PTGR2_PONAB (Prostaglandin reductase 2 OS=Pongo abelii GN=PTGR2 PE=2 SV=2)

HSP 1 Score: 128.257 bits (321), Expect = 5.098e-29
Identity = 83/239 (34.73%), Postives = 128/239 (53.56%), Query Frame = 2
Query:  104 SGFPKETDMYMTESSIELKVPKGSNGVLLKNLYLSCDPYMRPRMTYIEGS-YVESFKPGLPISGYGVAKVLDSENPEFSKGDLVWGMTG-WEEYSLITAPYLFKI--QHTDVPLSYYTGILGMPGMTAYVGFYEV--CSAKHGECVFISAASGAVGQLVGQFAKLLGCY-VVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRI 799
            +G P   +  M E  +   + +G   V ++ LYLS DPYMR RM    G+ Y+  ++    + G G+  + +S++   +KGD V      W+   ++    L K+  Q  D  LSY+ G +GMPG+T+ +G  E    +A   + + +S A+GA G + GQ   LLGC  VVG  G+ +K  LL ++ GFD A NYK++ ++   L+   P G+DVYF+NVGG   D V+  M     I
Sbjct:   15 NGNPVAENFRMEEVYLPDNINEGQ--VQVRTLYLSVDPYMRCRMNEDTGTDYITPWQLSQVVDGGGIGIIEESKHTNLTKGDFVTSFYWPWQTKVILDGNSLEKVDPQLVDGHLSYFLGAIGMPGLTSLIGIQEKGHITAGSNKTMVVSGAAGACGSVAGQIGHLLGCSRVVGICGTHEKCVLLTSELGFDAAINYKKD-NVAEQLRESCPAGVDVYFDNVGGNISDTVISQMNENSHI 250          
BLAST of CX671839 vs. ExPASy Swiss-Prot
Match: PTGR2_HUMAN (Prostaglandin reductase 2 OS=Homo sapiens GN=PTGR2 PE=1 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.483e-28
Identity = 82/239 (34.31%), Postives = 127/239 (53.14%), Query Frame = 2
Query:  104 SGFPKETDMYMTESSIELKVPKGSNGVLLKNLYLSCDPYMRPRMTYIEGS-YVESFKPGLPISGYGVAKVLDSENPEFSKGDLVWGMTG-WEEYSLITAPYLFKI--QHTDVPLSYYTGILGMPGMTAYVGFYEV--CSAKHGECVFISAASGAVGQLVGQFAKLLGCY-VVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRI 799
            +G P   +  M E  +   + +G   V ++ LYLS DPYMR RM    G+ Y+  ++    + G G+  + +S++   +KGD V      W+   ++    L K+  Q  D  LSY+ G +GMPG+T+ +G  E    +A   + + +S A+GA G + GQ    LGC  VVG  G+ +K  LL ++ GFD A NYK++ ++   L+   P G+DVYF+NVGG   D V+  M     I
Sbjct:   15 NGNPVAENFRMEEVYLPDNINEGQ--VQVRTLYLSVDPYMRCRMNEDTGTDYITPWQLSQVVDGGGIGIIEESKHTNLTKGDFVTSFYWPWQTKVILDGNSLEKVDPQLVDGHLSYFLGAIGMPGLTSLIGIQEKGHITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGFDAAINYKKD-NVAEQLRESCPAGVDVYFDNVGGNISDTVISQMNENSHI 250          
BLAST of CX671839 vs. ExPASy Swiss-Prot
Match: PTGR2_RAT (Prostaglandin reductase 2 OS=Rattus norvegicus GN=Ptgr2 PE=2 SV=2)

HSP 1 Score: 124.79 bits (312), Expect = 5.636e-28
Identity = 83/239 (34.73%), Postives = 129/239 (53.97%), Query Frame = 2
Query:  104 SGFPKETDMYMTESSIELKVPKGSNGVLLKNLYLSCDPYMRPRMTYIEGS-YVESFKPGLPISGYGVAKVLDSENPEFSKGDLVWGMTG-WEEYSLITAPYLFKI--QHTDVPLSYYTGILGMPGMTAYVGFYEV--CSAKHGECVFISAASGAVGQLVGQFAKLLGCY-VVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRI 799
            +G P   +  + E S+   + +G   V ++ LYLS DPYMR +M    G+ Y+  ++      G G+  + +S++ + +KGD V      W+  +++    L K+  Q  D  LSY+ G +GMPG+T+ +G  E    SA   + + +S A+GA G L GQ   LLGC  VVG  G+ +K   L ++ GFD A NYK   ++   L+   P+G+DVYF+NVGG   +AV+  M     I
Sbjct:   15 NGNPVAENFRVEEVSLPDTINEGQ--VRVRTLYLSVDPYMRCKMNEETGADYLAPWQLAQVADGGGLGVIEESKHQKLAKGDFVTSFYWPWQTKAILDGNGLEKVDPQLVDGHLSYFLGAIGMPGLTSLIGVQEKGHVSAGSNQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTHEKCLFLTSELGFDAAVNYKT-GNVAEQLREACPDGVDVYFDNVGGDISNAVISQMNQNSHI 250          
BLAST of CX671839 vs. ExPASy Swiss-Prot
Match: PTGR2_MOUSE (Prostaglandin reductase 2 OS=Mus musculus GN=Ptgr2 PE=1 SV=2)

HSP 1 Score: 124.405 bits (311), Expect = 7.361e-28
Identity = 84/239 (35.15%), Postives = 129/239 (53.97%), Query Frame = 2
Query:  104 SGFPKETDMYMTESSIELKVPKGSNGVLLKNLYLSCDPYMRPRMTYIEGS-YVESFKPGLPISGYGVAKVLDSENPEFSKGDLVWGMTG-WEEYSLITAPYLFKI--QHTDVPLSYYTGILGMPGMTAYVGFYEV--CSAKHGECVFISAASGAVGQLVGQFAKLLGCY-VVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRI 799
            +G P   +  + E S+   + +G   V ++ LYLS DPYMR +M    G+ Y+  ++      G G+  V +S++ + +KGD V      W+  +++    L K+  Q  D  LSY+ G +GMPG+T+ +G  E    SA   + + +S A+GA G L GQ   LLGC  VVG  G+++K   L ++ GFD A NYK   ++   L+   P G+DVYF+NVGG   +AV+  M     I
Sbjct:   15 NGNPVAENFRVEEFSLPDALNEGQ--VQVRTLYLSVDPYMRCKMNEDTGTDYLAPWQLAQVADGGGIGVVEESKHQKLTKGDFVTSFYWPWQTKAILDGNGLEKVDPQLVDGHLSYFLGAIGMPGLTSLIGVQEKGHISAGSNQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSELGFDAAVNYKT-GNVAEQLREACPGGVDVYFDNVGGDISNAVISQMNENSHI 250          
BLAST of CX671839 vs. ExPASy Swiss-Prot
Match: ZADH2_MOUSE (Zinc-binding alcohol dehydrogenase domain-containing protein 2 OS=Mus musculus GN=Zadh2 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 4.049e-18
Identity = 63/215 (29.30%), Postives = 106/215 (49.30%), Query Frame = 2
Query:  170 GSNGVLLKNLYLSCDPYMRPRMTYIEGSYVESFKPGLPISGYGVAKVLD---SENPEFSKGDLVWGMT--GWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRI 799
            G   +L++N ++  +      + Y  G Y  S KP   I   G+ +V+    S +  ++ G  V  M    + EY+++  P    I    V   Y T ++   G TAY+   E+     G+ V ++AA+G  GQ   Q +K+  C+V+G+  S +K   LK+  G D   NY+ E  +   LK+ +PEG+DV +E+VGG   D  +  +  +GR+
Sbjct:   61 GDGDLLVRNRFVGINA---SDINYSAGRYDPSLKPPFDIGFEGIGEVVALGLSASARYTVGQAVAYMAPGSFAEYTVV--PASIAIPMPSVKPEYLTMLVS--GTTAYLSLEELGELSEGKKVLVTAAAGGTGQFAVQLSKIAKCHVIGTCSSDEKAAFLKS-IGCDRPINYRTE-PVETVLKQEYPEGVDVVYESVGGAMFDLAVDALATKGRL 266          
BLAST of CX671839 vs. ExPASy Swiss-Prot
Match: ZADH2_HUMAN (Zinc-binding alcohol dehydrogenase domain-containing protein 2 OS=Homo sapiens GN=ZADH2 PE=1 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.538e-17
Identity = 64/215 (29.77%), Postives = 105/215 (48.84%), Query Frame = 2
Query:  170 GSNGVLLKNLYLSCDPYMRPRMTYIEGSYVESFKPGLPISGYGVAKVLD---SENPEFSKGDLVWGMT--GWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRI 799
            G   +L++N ++  +      + Y  G Y  S KP   I   G+ +V+    S +  ++ G  V  M    + EY+++ A     +    V   Y T  L + G TAY+   E+     G+ V ++AA+G  GQ   Q +K   C+V+G+  S +K   LK+  G D   NYK E  +   LK+ +PEG+DV +E+VGG   D  +  +  +GR+
Sbjct:   61 GDGDLLVRNRFVGVNA---SDINYSAGRYDPSVKPPFDIGFEGIGEVVALGLSASARYTVGQAVAYMAPGSFAEYTVVPASIATPVP--SVKPEYLT--LLVSGTTAYISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKS-LGCDRPINYKTE-PVGTVLKQEYPEGVDVVYESVGGAMFDLAVDALATKGRL 266          
BLAST of CX671839 vs. ExPASy Swiss-Prot
Match: YMN1_YEAST (Uncharacterized membrane protein YML131W OS=Saccharomyces cerevisiae GN=YML131W PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.208e-15
Identity = 62/220 (28.18%), Postives = 107/220 (48.64%), Query Frame = 2
Query:  182 VLLKNLYLSCDPYMRPRMTYIEGSYVESFKPGLPISGYGVAKVLDSENPEFSKGDLVWGMTGWEEYSLITAPYLFKIQHTDV----PLSYYTGILGMPGMTAYVGFYEVCSAK-----HGECVFISAASGAVGQLVGQFA--KLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEG-IDVYFENVGGKTLDAVLPNMKIRGRIAA 805
            +LL+  YLS DP  +  ++ ++ +Y +  +PG  I   G+ KVL S N  FS GD V  +TGW  +++I+   +  ++  D      L +Y  +LG   +TAY  F+     +     +G+   IS A+GAVG +  Q A        V+  AG  +KV  +++        +YK+ +     ++    E  +D + +NVG   L+A +  +K R  + A
Sbjct:   47 LLLETTYLSNDPAQKFWISSMDKNYAKGVQPGEIIPARGIGKVLASRNKAFSPGDYVSAVTGWTTHAIISQENVQGLRKLDKNKVGKLWWYLSVLGGTSLTAYFIFFTYAQLQEREEDYGKVYLISGAAGAVGTVCIQLALNVFKASKVIAIAGGPEKVAFVESFGDNVVGVDYKDPSFKQKLIEAAGGENTVDYFIDNVGSNVLEAGVLLLKQRAMLIA 266          
The following BLAST results are available for this feature:
BLAST of CX671839 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 29
Match NameE-valueIdentityDescription
PTGR1_HUMAN2.357e-4241.37Prostaglandin reductase 1 OS=Homo sapiens GN=PTGR1... [more]
YNCB_ECOLI2.439e-3938.27Putative NADP-dependent oxidoreductase yncB OS=Esc... [more]
PTGR2_BOVIN3.530e-3036.40Prostaglandin reductase 2 OS=Bos taurus GN=PTGR2 P... [more]
PTGR2_PONAB5.098e-2934.73Prostaglandin reductase 2 OS=Pongo abelii GN=PTGR2... [more]
PTGR2_HUMAN1.483e-2834.31Prostaglandin reductase 2 OS=Homo sapiens GN=PTGR2... [more]
PTGR2_RAT5.636e-2834.73Prostaglandin reductase 2 OS=Rattus norvegicus GN=... [more]
PTGR2_MOUSE7.361e-2835.15Prostaglandin reductase 2 OS=Mus musculus GN=Ptgr2... [more]
ZADH2_MOUSE4.049e-1829.30Zinc-binding alcohol dehydrogenase domain-containi... [more]
ZADH2_HUMAN1.538e-1729.77Zinc-binding alcohol dehydrogenase domain-containi... [more]
YMN1_YEAST3.208e-1528.18Uncharacterized membrane protein YML131W OS=Saccha... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_13D11_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-13D11-G21-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671839 ID=CX671839; Name=CX671839; organism=Citrus sinensis; type=EST; length=806bp
CTGTATTTCCCATTAACCTAAACAGAAGGAGCAAAGAAAAAAAGAGAACC
AGAAAATGGCTGAATTGGTGAGGAACAAGCAAGTGATATTGAAGGACTTT
GTGTCTGGTTTCCCAAAAGAAACAGACATGTACATGACCGAAAGCTCCAT
AGAATTGAAGGTGCCAAAAGGTTCAAATGGGGTTCTTTTAAAGAACCTGT
ACTTGTCCTGTGATCCGTACATGCGACCAAGAATGACCTACATCGAAGGA
TCTTACGTTGAATCCTTTAAACCTGGCTTGCCCATAAGTGGATATGGGGT
GGCTAAAGTTTTGGATTCAGAGAATCCAGAGTTCAGCAAAGGTGACTTGG
TTTGGGGAATGACTGGATGGGAAGAGTATAGTCTCATTACGGCTCCATAC
TTGTTTAAAATTCAACACACAGATGTGCCTCTTTCTTACTATACTGGAAT
CCTTGGTATGCCTGGTATGACCGCTTACGTTGGATTTTATGAGGTCTGCT
CTGCTAAGCATGGAGAGTGTGTCTTCATATCAGCAGCATCTGGTGCAGTT
GGTCAGCTTGTGGGGCAGTTTGCAAAGTTATTGGGCTGCTATGTCGTCGG
AAGTGCTGGAAGCAAAGACAAGGTTGATCTACTGAAGAACAAGTTTGGGT
TCGACGAGGCATTTAACTATAAAGAAGAAGCTGATTTGAATGCAGCATTG
AAAAGGTACTTTCCCGAAGGAATTGATGTATATTTTGAAAACGTTGGTGG
AAAAACGCTTGACGCAGTGCTACCCAACATGAAAATCCGTGGTCGAATTG
CTGCAT
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