CX671838

Overview
NameCX671838
Unique NameCX671838
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length764
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671838 vs. ExPASy Swiss-Prot
Match: CH60_CAUSK (60 kDa chaperonin OS=Caulobacter sp. (strain K31) GN=groL PE=3 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 1.772e-44
Identity = 93/171 (54.39%), Postives = 126/171 (73.68%), Query Frame = 3
Query:  255 AAKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEV-EDSELADVAAVSAGNNYEVGNMIAEAMSKVG 764
            AAKD++F+ D  A  K+  GVN LA+ V VTLGPKGRNVV+E  +GAP+   DGV+VAKE+EL D  EN+GA+++R+ A+KTND AGDGTTT+ VLAQ ++ EG+K VAAG NP+ + RGI+K    +V  +K  SK+V  ++E+A V  +SA  + +VG MIA+AM KVG
Sbjct:    2 AAKDVYFSSD--ARDKMLRGVNILANAVKVTLGPKGRNVVIEKSFGAPRSTKDGVSVAKEIELADRFENLGAQMIREVASKTNDKAGDGTTTATVLAQAIVQEGLKSVAAGMNPMDLKRGIDKAVHVVVDSIKASSKKVTTNNEIAQVGTISANGDKDVGEMIAKAMDKVG 170          
BLAST of CX671838 vs. ExPASy Swiss-Prot
Match: CH60_BRUO2 (60 kDa chaperonin OS=Brucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512) GN=groL PE=3 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 1.772e-44
Identity = 94/171 (54.97%), Postives = 124/171 (72.51%), Query Frame = 3
Query:  255 AAKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVEDS-ELADVAAVSAGNNYEVGNMIAEAMSKVG 764
            AAKD+ F +   A +K+  GV+ LAD V VTLGPKGRNVV+E  +GAP+I  DGV+VAKEVELED  EN+GA+++R+ A+KTND AGDGTTT+ VL Q ++ EG K VAAG NP+ + RGI+     +V+EL + +K++  S E+A V  +SA    E+G MIAEAM KVG
Sbjct:    2 AAKDVKFGRT--AREKMLRGVDILADAVKVTLGPKGRNVVIEKSFGAPRITKDGVSVAKEVELEDKFENMGAQMLREVASKTNDTAGDGTTTATVLGQAIVQEGAKAVAAGMNPMDLKRGIDLAVNEVVAELLKKAKKINTSEEVAQVGTISANGEAEIGKMIAEAMQKVG 170          
BLAST of CX671838 vs. ExPASy Swiss-Prot
Match: CH60_BRUME (60 kDa chaperonin OS=Brucella melitensis GN=groL PE=3 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 1.772e-44
Identity = 94/171 (54.97%), Postives = 124/171 (72.51%), Query Frame = 3
Query:  255 AAKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVEDS-ELADVAAVSAGNNYEVGNMIAEAMSKVG 764
            AAKD+ F +   A +K+  GV+ LAD V VTLGPKGRNVV+E  +GAP+I  DGV+VAKEVELED  EN+GA+++R+ A+KTND AGDGTTT+ VL Q ++ EG K VAAG NP+ + RGI+     +V+EL + +K++  S E+A V  +SA    E+G MIAEAM KVG
Sbjct:    2 AAKDVKFGRT--AREKMLRGVDILADAVKVTLGPKGRNVVIEKSFGAPRITKDGVSVAKEVELEDKFENMGAQMLREVASKTNDTAGDGTTTATVLGQAIVQEGAKAVAAGMNPMDLKRGIDLAVNEVVAELLKKAKKINTSEEVAQVGTISANGEAEIGKMIAEAMQKVG 170          
BLAST of CX671838 vs. ExPASy Swiss-Prot
Match: CH60_BRUMB (60 kDa chaperonin OS=Brucella melitensis biotype 2 (strain ATCC 23457) GN=groL PE=3 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 1.772e-44
Identity = 94/171 (54.97%), Postives = 124/171 (72.51%), Query Frame = 3
Query:  255 AAKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVEDS-ELADVAAVSAGNNYEVGNMIAEAMSKVG 764
            AAKD+ F +   A +K+  GV+ LAD V VTLGPKGRNVV+E  +GAP+I  DGV+VAKEVELED  EN+GA+++R+ A+KTND AGDGTTT+ VL Q ++ EG K VAAG NP+ + RGI+     +V+EL + +K++  S E+A V  +SA    E+G MIAEAM KVG
Sbjct:    2 AAKDVKFGRT--AREKMLRGVDILADAVKVTLGPKGRNVVIEKSFGAPRITKDGVSVAKEVELEDKFENMGAQMLREVASKTNDTAGDGTTTATVLGQAIVQEGAKAVAAGMNPMDLKRGIDLAVNEVVAELLKKAKKINTSEEVAQVGTISANGEAEIGKMIAEAMQKVG 170          
BLAST of CX671838 vs. ExPASy Swiss-Prot
Match: CH60_BRUAB (60 kDa chaperonin OS=Brucella abortus GN=groL PE=3 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 1.772e-44
Identity = 94/171 (54.97%), Postives = 124/171 (72.51%), Query Frame = 3
Query:  255 AAKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVEDS-ELADVAAVSAGNNYEVGNMIAEAMSKVG 764
            AAKD+ F +   A +K+  GV+ LAD V VTLGPKGRNVV+E  +GAP+I  DGV+VAKEVELED  EN+GA+++R+ A+KTND AGDGTTT+ VL Q ++ EG K VAAG NP+ + RGI+     +V+EL + +K++  S E+A V  +SA    E+G MIAEAM KVG
Sbjct:    2 AAKDVKFGRT--AREKMLRGVDILADAVKVTLGPKGRNVVIEKSFGAPRITKDGVSVAKEVELEDKFENMGAQMLREVASKTNDTAGDGTTTATVLGQAIVQEGAKAVAAGMNPMDLKRGIDLAVNEVVAELLKKAKKINTSEEVAQVGTISANGEAEIGKMIAEAMQKVG 170          
BLAST of CX671838 vs. ExPASy Swiss-Prot
Match: CH60_BRUA2 (60 kDa chaperonin OS=Brucella abortus (strain 2308) GN=groL PE=3 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 1.772e-44
Identity = 94/171 (54.97%), Postives = 124/171 (72.51%), Query Frame = 3
Query:  255 AAKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVEDS-ELADVAAVSAGNNYEVGNMIAEAMSKVG 764
            AAKD+ F +   A +K+  GV+ LAD V VTLGPKGRNVV+E  +GAP+I  DGV+VAKEVELED  EN+GA+++R+ A+KTND AGDGTTT+ VL Q ++ EG K VAAG NP+ + RGI+     +V+EL + +K++  S E+A V  +SA    E+G MIAEAM KVG
Sbjct:    2 AAKDVKFGRT--AREKMLRGVDILADAVKVTLGPKGRNVVIEKSFGAPRITKDGVSVAKEVELEDKFENMGAQMLREVASKTNDTAGDGTTTATVLGQAIVQEGAKAVAAGMNPMDLKRGIDLAVNEVVAELLKKAKKINTSEEVAQVGTISANGEAEIGKMIAEAMQKVG 170          
BLAST of CX671838 vs. ExPASy Swiss-Prot
Match: CH60_BRUA1 (60 kDa chaperonin OS=Brucella abortus (strain S19) GN=groL PE=2 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 1.772e-44
Identity = 94/171 (54.97%), Postives = 124/171 (72.51%), Query Frame = 3
Query:  255 AAKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVEDS-ELADVAAVSAGNNYEVGNMIAEAMSKVG 764
            AAKD+ F +   A +K+  GV+ LAD V VTLGPKGRNVV+E  +GAP+I  DGV+VAKEVELED  EN+GA+++R+ A+KTND AGDGTTT+ VL Q ++ EG K VAAG NP+ + RGI+     +V+EL + +K++  S E+A V  +SA    E+G MIAEAM KVG
Sbjct:    2 AAKDVKFGRT--AREKMLRGVDILADAVKVTLGPKGRNVVIEKSFGAPRITKDGVSVAKEVELEDKFENMGAQMLREVASKTNDTAGDGTTTATVLGQAIVQEGAKAVAAGMNPMDLKRGIDLAVNEVVAELLKKAKKINTSEEVAQVGTISANGEAEIGKMIAEAMQKVG 170          
BLAST of CX671838 vs. ExPASy Swiss-Prot
Match: CH60_ACEP3 (60 kDa chaperonin OS=Acetobacter pasteurianus (strain NBRC 3283 / LMG 1513 / CCTM 1153) GN=groL PE=3 SV=2)

HSP 1 Score: 179.489 bits (454), Expect = 1.772e-44
Identity = 93/171 (54.39%), Postives = 125/171 (73.10%), Query Frame = 3
Query:  255 AAKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEV-EDSELADVAAVSAGNNYEVGNMIAEAMSKVG 764
            AAKD+ F  D  A +++  GV+ LAD V VTLGPKGRNVVL+  +GAP+I  DGV+VAKE+EL D  EN+GA+++R+ A+KTND+AGDGTTT+ VLAQ ++ EG K VAAG NP+ + RGI+K    ++ ELK+ +K+V   +E A V  +SA    E+G MI+EAM KVG
Sbjct:    2 AAKDVKFGAD--ARQRMLRGVDILADAVKVTLGPKGRNVVLDKSFGAPRITKDGVSVAKEIELADKFENMGAQMLREVASKTNDIAGDGTTTATVLAQAIVREGHKAVAAGMNPMDLKRGIDKAVAVVIEELKKNAKKVTTPAETAQVGTISANGESEIGQMISEAMQKVG 170          
BLAST of CX671838 vs. ExPASy Swiss-Prot
Match: CH603_NITWN (60 kDa chaperonin 3 OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) GN=groL3 PE=3 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 1.772e-44
Identity = 94/171 (54.97%), Postives = 126/171 (73.68%), Query Frame = 3
Query:  255 AAKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVEDS-ELADVAAVSAGNNYEVGNMIAEAMSKVG 764
            AAKD+ F+ D  A +++  GV+ LAD V VTLGPKGRNVV+E  +GAP+I  DGVTVAKE+ELED  EN+GA++VR+ A+KTNDLAGDGTTT+ VLAQ ++ EG K VAAG NP+ + RGI+    A+V ++ + +K V  S E+A V  +S+  +  +G MIA+AM KVG
Sbjct:    2 AAKDVKFSGD--ARQRMLRGVDILADAVKVTLGPKGRNVVIERSFGAPRITKDGVTVAKEIELEDRFENMGAQMVREVASKTNDLAGDGTTTATVLAQAIVREGAKAVAAGMNPMDLKRGIDIAVAAVVKDIGKRAKAVASSAEVAQVGTISSNGDASIGKMIAQAMQKVG 170          
BLAST of CX671838 vs. ExPASy Swiss-Prot
Match: CH601_BRASO (60 kDa chaperonin 1 OS=Bradyrhizobium sp. (strain ORS278) GN=groL1 PE=3 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 1.772e-44
Identity = 93/171 (54.39%), Postives = 126/171 (73.68%), Query Frame = 3
Query:  255 AAKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEV-EDSELADVAAVSAGNNYEVGNMIAEAMSKVG 764
            AAKD+ F+ D  A  ++  GV+ LA+ V VTLGPKGRNVV+E  +GAP+I  DGVTVAKE+ELED  EN+GA++VR+ A+KT DLAGDGTTT+ VLAQ ++ EG K VAAG NP+ + RGI+   +A+V +LK  +K++  + E+A V  +SA  + E+G  +AEAM KVG
Sbjct:    2 AAKDVKFSTD--ARDRMLRGVDILANAVKVTLGPKGRNVVIEKSFGAPRITKDGVTVAKEIELEDKFENMGAQMVREVASKTADLAGDGTTTATVLAQAIVKEGAKSVAAGMNPMDLKRGIDLAVEAIVKDLKAHAKKITSNDEIAQVGTISANGDSEIGRFLAEAMQKVG 170          
The following BLAST results are available for this feature:
BLAST of CX671838 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH60_CAUSK1.772e-4454.3960 kDa chaperonin OS=Caulobacter sp. (strain K31) ... [more]
CH60_BRUO21.772e-4454.9760 kDa chaperonin OS=Brucella ovis (strain ATCC 25... [more]
CH60_BRUME1.772e-4454.9760 kDa chaperonin OS=Brucella melitensis GN=groL P... [more]
CH60_BRUMB1.772e-4454.9760 kDa chaperonin OS=Brucella melitensis biotype 2... [more]
CH60_BRUAB1.772e-4454.9760 kDa chaperonin OS=Brucella abortus GN=groL PE=3... [more]
CH60_BRUA21.772e-4454.9760 kDa chaperonin OS=Brucella abortus (strain 2308... [more]
CH60_BRUA11.772e-4454.9760 kDa chaperonin OS=Brucella abortus (strain S19)... [more]
CH60_ACEP31.772e-4454.3960 kDa chaperonin OS=Acetobacter pasteurianus (str... [more]
CH603_NITWN1.772e-4454.9760 kDa chaperonin 3 OS=Nitrobacter winogradskyi (s... [more]
CH601_BRASO1.772e-4454.3960 kDa chaperonin 1 OS=Bradyrhizobium sp. (strain ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_13D10_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-13D10-G19-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671838 ID=CX671838; Name=CX671838; organism=Citrus sinensis; type=EST; length=764bp
TGCAGCTCCCCTTATCTCTTTAAACCCTAAAACTCTCGCACTTTCCGCCG
TCTCACAGTTTAAACGAATAAATGGCGTCGACTTTCACTGCCATGTCTTC
CATTAGCTCCATGATTGCTCCTAATGGACGAATGACTGATAAGAAGCTTG
CATCTTCTTCGAACAAATTGTCATCACTTGCTTCCATTTCTTCAAGTTCA
TTCGGCAGGAGACAGAGTGTAGCTCTACGCAGGGCCCGCACACCTAAGAT
TTATGCGGCAAAGGACTTGCATTTCAACAAGGATGGATATGCCATGAAGA
AACTTCAAAATGGTGTCAACAAGCTTGCAGATCTAGTTGGAGTTACCCTT
GGTCCCAAGGGCAGGAATGTTGTTCTAGAGAGCAAGTACGGTGCCCCAAA
AATTGTGAATGATGGTGTAACTGTGGCCAAAGAAGTTGAGTTAGAGGACC
CGGTTGAGAACATTGGTGCTAAATTAGTGAGACAAGCAGCTGCCAAGACT
AATGACTTGGCTGGTGATGGAACAACAACATCTGTTGTTCTTGCGCAAGG
GCTTATAGCTGAAGGTGTTAAGGTCGTGGCAGCTGGTGCAAATCCTGTTC
TTATCACAAGAGGCATTGAGAAGACATCTAAGGCTCTTGTTTCTGAGCTC
AAGCAGATGTCAAAAGAGGTTGAAGATAGTGAACTTGCCGATGTAGCAGC
TGTTAGTGCAGGGAACAACTATGAAGTTGGGAATATGATTGCAGAAGCCA
TGAGTAAAGTGGGA
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