CX671837
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX671837 vs. ExPASy Swiss-Prot
Match: CH602_SYNPW (60 kDa chaperonin 2 OS=Synechococcus sp. (strain WH7803) GN=groL2 PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 5.681e-29 Identity = 71/158 (44.94%), Postives = 102/158 (64.56%), Query Frame = -2 Query: 259 KEKKLRVEDALNATKAAXXXXXXXXXGCTLLRLSFKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGYGY 732 K+KKLR+EDA+NATKAA G TL L+ ++ + + EE +GA+IV AL PL IA+NAGVNG+VV+E V + ++ GYNAA G+Y D++AAGI+DP KV R L++A+S+A L ++C+V ++ E + A PAG M + Y Sbjct: 388 KDKKLRLEDAINATKAAVEEGIVPGGGTTLAHLAPALEQWAASTLSGEELIGANIVAAALTAPLMRIAENAGVNGAVVAENVKAKSFNE-GYNAANGDYVDMLAAGIVDPAKVTRSGLQNAASIAGMVLTTECIVADLPEKKEAAPAGGGMGGGDFDY 544
BLAST of CX671837 vs. ExPASy Swiss-Prot
Match: CH601_SYNJA (60 kDa chaperonin 1 OS=Synechococcus sp. (strain JA-3-3Ab) GN=groL1 PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 5.681e-29 Identity = 76/148 (51.35%), Postives = 98/148 (66.22%), Query Frame = -2 Query: 289 KEKKLRVEDALNATKAAXXXXXXXXXGCTLLRLSFKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAG 732 K++KLR+EDALNAT+AA G TLL LS + A K L N EE+VGADIV RAL PL IA NAG+ GSVV EKVL + +G++A TG Y D+ A GI+DP KVVR L++A+S+A +L ++ +VVE +PEP G Sbjct: 389 KDRKLRIEDALNATRAAVEEGIVPGGGATLLHLSKGIPAFKANL-NAEEQVGADIVCRALQAPLYQIAHNAGLEGSVVVEKVLEKEM-PFGFDALTGTYVDMFAQGIVDPAKVVRSALQNAASIAAMYLTTEAIVVE--KPEPKTKTG 532
BLAST of CX671837 vs. ExPASy Swiss-Prot
Match: CH601_SYNS3 (60 kDa chaperonin 1 OS=Synechococcus sp. (strain CC9311) GN=groL1 PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.653e-28 Identity = 74/155 (47.74%), Postives = 101/155 (65.16%), Query Frame = -2 Query: 268 KEKKLRVEDALNATKAAXXXXXXXXXGCTLLRLSFKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSG 732 K +KLR+EDALNAT+AA G TLL +S ++DA+ L+ D+ K G +IV+RAL PL+ IA+NAG NG VV ++V +S G+NA TGN+EDLM AGI+D +KVVR L+ A S+A + ++ VV + +PEP PAG D G Sbjct: 388 KNRKLRIEDALNATRAAVEEGIVAGGGSTLLHISAELDALTSGLEGDQ-KTGVEIVQRALSAPLRQIAENAGSNGDVVVDRVRNSGE---GFNALTGNFEDLMNAGILDASKVVRLALQDAVSIASLVVTTEVVVAD--KPEPPAPAGGGGDPMG 536
BLAST of CX671837 vs. ExPASy Swiss-Prot
Match: CH601_SYNPX (60 kDa chaperonin 1 OS=Synechococcus sp. (strain WH8102) GN=groL1 PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.653e-28 Identity = 72/158 (45.57%), Postives = 100/158 (63.29%), Query Frame = -2 Query: 259 KEKKLRVEDALNATKAAXXXXXXXXXGCTLLRLSFKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGYGY 732 K+KKLR+EDA+NATKAA G TL L+ ++ + EE +GA+IV AL PL IA+NAG NG+VV+E V S + GYNAATG+Y D++AAGI+DP KV R L++A+S+A L ++C+V ++ E + A PAG M + Y Sbjct: 388 KDKKLRLEDAINATKAAVEEGIVPGGGTTLAHLAPSLEEWANGNLSGEELIGANIVAAALTAPLMRIAENAGANGAVVAENVKSRAISE-GYNAATGDYVDMLAAGIVDPAKVTRSGLQNAASIAGMVLTTECIVADLPEKKDAAPAGGGMGGGDFDY 544
BLAST of CX671837 vs. ExPASy Swiss-Prot
Match: CH602_RHIEC (60 kDa chaperonin 2 OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=groL2 PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 2.159e-28 Identity = 72/154 (46.75%), Postives = 98/154 (63.64%), Query Frame = -2 Query: 277 KEKKLRVEDALNATKAAXXXXXXXXXGCTLLRLSFKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVE--IKEPEPAMPAGNPMD 732 KEKK RV+DAL+AT+AA G LLR +D+IK ND+++VG DIV+RA+ P++ IA+NAG GS++ K+ + YG+NA TG Y DL A G+IDP KVVR L+ A+SVA + ++ ++ E KE PAMPAG MD Sbjct: 390 KEKKDRVDDALHATRAAVEEGILPGGGVALLRAVKALDSIKTA--NDDQRVGVDIVRRAIEAPVRQIAENAGAEGSIIVGKLREKSDFSYGWNAQTGEYGDLYAQGVIDPAKVVRTALQDAASVAGLLVTTEAMIAEKPKKEAAPAMPAGAGMD 541
BLAST of CX671837 vs. ExPASy Swiss-Prot
Match: RUBA_PEA (RuBisCO large subunit-binding protein subunit alpha, chloroplastic OS=Pisum sativum PE=1 SV=2) HSP 1 Score: 125.176 bits (313), Expect = 3.682e-28 Identity = 69/147 (46.94%), Postives = 99/147 (67.35%), Query Frame = -2 Query: 292 KEKKLRVEDALNATKAAXXXXXXXXXGCTLLRLSFKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPA 732 +++KLR+EDA NAT AA G L+ LS V AIKE L++ +E++GADIV++AL P LIA+NAG+ G VV EK+ + + + GYNA T YE+L+ +G+IDP KV RC L++A+SVA L + +VVE +P+ A+ A Sbjct: 435 EDRKLRIEDAKNATFAAIEEGIVPGGGTALVHLSGYVPAIKEKLEDADERLGADIVQKALVAPAALIAQNAGIEGEVVVEKIKNGE-WEVGYNAMTDTYENLVESGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPKPKAAVAA 580
BLAST of CX671837 vs. ExPASy Swiss-Prot
Match: CH602_GLOVI (60 kDa chaperonin 2 OS=Gloeobacter violaceus GN=groL2 PE=3 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 3.682e-28 Identity = 73/157 (46.50%), Postives = 100/157 (63.69%), Query Frame = -2 Query: 262 KEKKLRVEDALNATKAAXXXXXXXXXGCTLLRLSFKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGYG 732 K++KLR+EDALNATKAA G TLL L+ K+DAIK L D+EK GAD++ RAL PL+ IA NAGV GSV+++KV D GY+A G + D++AAG+ DP KVVR L++A+S+A L ++ ++V+ +PE D G G Sbjct: 389 KDRKLRIEDALNATKAAVEEGIVPGGGTTLLHLTKKIDAIKAGLA-DDEKTGADLIARALEAPLRQIADNAGVEGSVIAQKVRELD-FNIGYDAMKGEFVDMLAAGVADPAKVVRSALQNAASIAAMVLTTEVLIVD--KPEKKKAGAGAPDMGGMG 541
BLAST of CX671837 vs. ExPASy Swiss-Prot
Match: CH60_ACICJ (60 kDa chaperonin OS=Acidiphilium cryptum (strain JF-5) GN=groL PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 4.809e-28 Identity = 66/157 (42.04%), Postives = 103/157 (65.61%), Query Frame = -2 Query: 262 KEKKLRVEDALNATKAAXXXXXXXXXGCTLLRLSFKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGYG 732 KE+K RV+DAL+AT+AA G L R S ++ +K DND+++ G DI+++A+ P++ IA+NAG +G+V+S KVL +D++ +G++A +G ++D++ AGIIDPTKVVR L+ A+SVA + ++ +V E PE PAG G G Sbjct: 390 KERKDRVDDALHATRAAVEEGIVPGGGVALARASLAINKLKA--DNDDQRFGIDIIRKAVLAPMRQIAENAGEDGAVISGKVLDNDDYSFGFDAQSGEFKDMVKAGIIDPTKVVRTALQDAASVAGLLITTEAMVAE--RPEKKAPAGGDAGMGGMG 542
BLAST of CX671837 vs. ExPASy Swiss-Prot
Match: CH602_PROM1 (60 kDa chaperonin 2 OS=Prochlorococcus marinus (strain NATL1A) GN=groL2 PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 4.809e-28 Identity = 70/151 (46.36%), Postives = 99/151 (65.56%), Query Frame = -2 Query: 280 KEKKLRVEDALNATKAAXXXXXXXXXGCTLLRLSFKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPM 732 K+KKLR+EDA+NATKAA G TL L+ ++ T + EE +GA+IV+ AL PL IA+NAG NG+VV+E V S + GYNAATG Y D+++AGI+DP KV R L++A+S+A L ++C+V ++ E + + PAG M Sbjct: 388 KDKKLRLEDAINATKAAVEEGIVPGGGTTLAHLAPALEDWSSTNLSGEELIGANIVEAALTSPLMRIAENAGANGAVVAENVKSKPVND-GYNAATGEYVDMLSAGIVDPAKVTRSGLQNAASIAGMVLTTECIVADLPEKKDSSPAGGGM 537
BLAST of CX671837 vs. ExPASy Swiss-Prot
Match: CH602_RHORT (60 kDa chaperonin 2 OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN=groL2 PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 6.281e-28 Identity = 69/157 (43.95%), Postives = 103/157 (65.61%), Query Frame = -2 Query: 262 KEKKLRVEDALNATKAAXXXXXXXXXGCTLLRLSFKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGYG 732 KEKK RV+DA++AT+AA G LL +D++K N ++ VG +IV+RAL P++ IA+NAGV+G+VV+ K+L + + +GYNA TG YE+L+ AG+IDPTKVVR L+ A+S+A + ++ +V EI E + AMP+ + G G Sbjct: 390 KEKKDRVDDAMHATRAAVEEGVVAGGGVALLHAIRSLDSVKGA--NPDQNVGIEIVRRALQAPVRQIAENAGVDGAVVAGKLLENSDTDFGYNAQTGIYENLVTAGVIDPTKVVRAALQGAASIAGLLITTEAMVAEIPEKKDAMPSPDMGGMGGMG 544 The following BLAST results are available for this feature:
BLAST of CX671837 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX671837 ID=CX671837; Name=CX671837; organism=Citrus sinensis; type=EST; length=733bpback to top |