CX671837
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX671837 vs. ExPASy Swiss-Prot
Match: CH601_ANAVT (60 kDa chaperonin 1 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=groL1 PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.827e-27 Identity = 70/158 (44.30%), Postives = 97/158 (61.39%), Query Frame = -2 Query: 259 KEKKLRVEDALNATKAAXXXXXXXXXGCTLLRLSFKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGYGY 732 K+KKLR+EDA+NATKAA G TL L+ +++ + DEE GA IV RAL PLK IA+NAG NG+V++E+V G+NAAT + D+ AGI+DP KV R L++A+S+A L ++C+VV+ EP+ A PAG + Y Sbjct: 388 KDKKLRLEDAINATKAAVEEGIVPGGGTTLAHLTPELEVWANSNLKDEELTGALIVARALPAPLKRIAENAGQNGAVIAERV-KEKAFNVGFNAATNEFVDMFEAGIVDPAKVTRSALQNAASIAGMVLTTECIVVDKPEPKDAAPAGAGAGGGDFDY 544
BLAST of CX671837 vs. ExPASy Swiss-Prot
Match: CH60_SULMW (60 kDa chaperonin OS=Sulcia muelleri (strain GWSS) GN=groL PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.387e-27 Identity = 72/157 (45.86%), Postives = 100/157 (63.69%), Query Frame = -2 Query: 262 KEKKLRVEDALNATKAAXXXXXXXXXGCTLLRLSFKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGYG 732 KEKK RV+DAL+AT+AA G L+R ++ +K +DN ++ G IVKR+L PL+ I NAG GSV+ KV N ++GY+A G Y+++++ GIIDPTKV R LE+A+SV+ L ++CV+ EIK+ EPAMP M NSG G Sbjct: 390 KEKKDRVDDALHATRAAVEEGIVAGGGVALVRAIKSLNGLK--VDNVDQDTGIKIVKRSLQEPLRQIVANAGEEGSVIVAKVAEGKN-EFGYDAKLGEYKNMISEGIIDPTKVTRVALENAASVSGMLLTTECVITEIKKEEPAMP---QMPNSGMG 540
BLAST of CX671837 vs. ExPASy Swiss-Prot
Match: CH60_RUBXD (60 kDa chaperonin OS=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) GN=groL PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.387e-27 Identity = 71/148 (47.97%), Postives = 96/148 (64.86%), Query Frame = -2 Query: 289 KEKKLRVEDALNATKAAXXXXXXXXXGCTLLRLSFKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAG 732 KEKK RVEDAL+AT+AA G LL+ V + + LD DE + GA IV RAL P++ IA+NAG +GS+V +KV + + G+NA TG YEDL+AAG+IDP V R L++A+S+A + +D VV E +E +PAMP G Sbjct: 389 KEKKHRVEDALSATRAALEEGIVPGGGVALLKAQKAVGELLDELDGDE-RTGARIVYRALEEPIRQIAENAGADGSIVVDKVRAQGD-SIGFNALTGGYEDLVAAGVIDPAMVTRSALQNAASIAGLLVTTDVVVAEPEEEQPAMPGG 534
BLAST of CX671837 vs. ExPASy Swiss-Prot
Match: CH60_HYPNA (60 kDa chaperonin OS=Hyphomonas neptunium (strain ATCC 15444) GN=groL PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.387e-27 Identity = 69/157 (43.95%), Postives = 96/157 (61.15%), Query Frame = -2 Query: 262 KEKKLRVEDALNATKAAXXXXXXXXXGCTLLRLSFKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGYG 732 KE+K RV+DALNAT+AA G LLR S +D + ND+EK G DIV++AL P++ IA+NAGV GSVV +L++ + YG+NA T Y DL+A G+IDP KVVR L++A+S+A + ++ + E + E A G P G G Sbjct: 390 KERKDRVDDALNATRAAVEEGIVPGGGVALLRSSKNIDVVGL---NDDEKAGIDIVRKALEAPIRQIAENAGVEGSVVVNTILNNKSRSYGFNAQTEEYGDLVAMGVIDPVKVVRSALQNAASIASLLITTEAGIAEAPKKESAGGGGMPGGMGGMG 543
BLAST of CX671837 vs. ExPASy Swiss-Prot
Match: CH601_RHIEC (60 kDa chaperonin 1 OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=groL1 PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.387e-27 Identity = 69/149 (46.31%), Postives = 93/149 (62.42%), Query Frame = -2 Query: 289 KEKKLRVEDALNATKAAXXXXXXXXXGCTLLRLSFKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEI-KEPEPAMPAG 732 KEKK R++DALNAT+AA G LLR S K+ A ND+++ G +IV+RAL P + IA+NAG S+V K+L D YGYNA TG Y D++ GIIDP KVVR L+ A+SVA + ++ ++ E+ K+ PAMP G Sbjct: 390 KEKKDRIDDALNATRAAVQEGIVPGGGVALLRSSVKISAKGV---NDDQEAGINIVRRALQAPARQIAENAGDEASIVVGKILDKDQDNYGYNAQTGEYGDMIGMGIIDPVKVVRTALQDAASVASLLITTEAMIAELPKKDAPAMPGG 535
BLAST of CX671837 vs. ExPASy Swiss-Prot
Match: CH601_PROM3 (60 kDa chaperonin 1 OS=Prochlorococcus marinus (strain MIT 9303) GN=groL1 PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.387e-27 Identity = 69/148 (46.62%), Postives = 97/148 (65.54%), Query Frame = -2 Query: 289 KEKKLRVEDALNATKAAXXXXXXXXXGCTLLRLSFKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAG 732 K+KKLR+EDA+NATKAA G TL L+ + + + EE +GA+IV+ +L PL IA+NAG NG+VV+E V S GYNAATG+Y D++AAGI+DP KV R L++A+S+A L ++C+V ++ E + A PAG Sbjct: 388 KDKKLRLEDAINATKAAVEEGIVPGGGTTLTHLAADLQKWANSNLSGEELIGANIVEASLAAPLMRIAENAGANGAVVAENVKSRPISD-GYNAATGDYIDMLAAGIVDPAKVTRSGLQNAASIAGMVLTTECIVADLPEKKEAAPAG 534
BLAST of CX671837 vs. ExPASy Swiss-Prot
Match: CH60_DESAA (60 kDa chaperonin OS=Desulfatibacillum alkenivorans (strain AK-01) GN=groL PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 3.117e-27 Identity = 72/161 (44.72%), Postives = 99/161 (61.49%), Query Frame = -2 Query: 262 KEKKLRVEDALNATKAAXXXXXXXXXGCTLLRLSFKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPE----PAMPAGNPMDNSGYG 732 KEKK RVEDALNAT+AA G L+R +DA+ + E+K+GA +V RAL PL++IA NAG+ GSVV +KV +++ +GYNA T YEDL+ AG+IDPTKVVR L++A S+A L ++ ++ + + PAMP G G G Sbjct: 389 KEKKARVEDALNATRAAVEEGIVPGGGVALVRA---IDAVAKAKITGEQKIGARVVMRALEAPLRMIANNAGMEGSVVLDKVKNTEG-SFGYNADTDTYEDLIEAGVIDPTKVVRLALQNACSIAGLMLTTEAMIADKPDENAGGMPAMPGGGMGGMGGMG 545
BLAST of CX671837 vs. ExPASy Swiss-Prot
Match: CH60_CAMFF (60 kDa chaperonin OS=Campylobacter fetus subsp. fetus (strain 82-40) GN=groL PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 3.117e-27 Identity = 75/155 (48.39%), Postives = 97/155 (62.58%), Query Frame = -2 Query: 268 KEKKLRVEDALNATKAAXXXXXXXXXGCTLLRLSFKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSG 732 KEKK RV+DALNATKAA G L++ +V+ +L DE +GA+IVKRAL PL+ IA+NAG + VV+ V +D YG+NAA+G Y D+ AGIIDP KV R L++A SVA L ++ V EIKE +PAMP PM + G Sbjct: 389 KEKKDRVDDALNATKAAVEEGIVVGGGAALIKAGNRVNL---SLKGDE-LIGAEIVKRALFAPLRQIAENAGFDAGVVANSVSCADCPNYGFNAASGEYVDMFEAGIIDPVKVERIALQNAVSVASLLLTTEATVSEIKEDKPAMP---PMPDMG 536
BLAST of CX671837 vs. ExPASy Swiss-Prot
Match: CH60_AZOPC (60 kDa chaperonin OS=Azobacteroides pseudotrichonymphae genomovar. CFP2 GN=groL PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 3.117e-27 Identity = 70/155 (45.16%), Postives = 97/155 (62.58%), Query Frame = -2 Query: 268 KEKKLRVEDALNATKAAXXXXXXXXXGCTLLRLSFKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSG 732 KEKK RV+DAL+AT+AA G +R ++ K N++E G +IVKRA+ PL+ I +NAG G+V++++V + +GYNA TG YEDL AG+IDPTKV R LE+A+S+A L ++CV+ E+KE PA PA PM G Sbjct: 390 KEKKDRVDDALSATRAAIEEGTVPGGGVAYVRAISILEGFKGI--NEDETTGIEIVKRAIEEPLRQIVENAGKEGAVIAQRV-KEEKDDFGYNARTGIYEDLYVAGVIDPTKVARVALENAASIAGMLLTTECVITEVKEENPA-PAMPPMGGGG 540
BLAST of CX671837 vs. ExPASy Swiss-Prot
Match: CH60_ALKOO (60 kDa chaperonin OS=Alkaliphilus oremlandii (strain OhILAs) GN=groL PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 3.117e-27 Identity = 67/148 (45.27%), Postives = 99/148 (66.89%), Query Frame = -2 Query: 289 KEKKLRVEDALNATKAAXXXXXXXXXGCTLLRLSFKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAG 732 KE+KLR+EDALNAT+A G +L+ + V+A+ ET + DE + G I++RAL PL+ IA NAG+ GSV+ EKV+SS+ G++A T Y +++ AGI+DPTKV R L++A+SV+ L ++ +V+IK EP+MP G Sbjct: 388 KERKLRIEDALNATRAGVEEGMVAGGGASLVHVIPAVEALLETTEGDE-RTGVKIIRRALEEPLRQIAANAGLEGSVIVEKVMSSEKG-IGFDALTEKYVNMIEAGIVDPTKVTRSALQNAASVSAMLLTTEGAIVDIKSDEPSMPGG 533 The following BLAST results are available for this feature:
BLAST of CX671837 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX671837 ID=CX671837; Name=CX671837; organism=Citrus sinensis; type=EST; length=733bpback to top |