CX671837
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX671837 vs. ExPASy Swiss-Prot
Match: CH604_RHIEC (60 kDa chaperonin 4 OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=groL4 PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 3.117e-27 Identity = 72/154 (46.75%), Postives = 96/154 (62.34%), Query Frame = -2 Query: 277 KEKKLRVEDALNATKAAXXXXXXXXXGCTLLRLSFKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVE--IKEPEPAMPAGNPMD 732 KEKK RV+DAL+AT+AA G LLR +D IK ND+++VG +IV+RAL P + IA+NAG GSVV K+ + YG+NA TG + DL A G+IDP KVVR L+ ASS+A + ++ ++ E K+ PAMPAG MD Sbjct: 390 KEKKDRVDDALHATRAAVEEGILPGGGVALLRAVKALDNIKTA--NDDQRVGVEIVRRALEAPARQIAENAGAEGSVVVGKLREKSDFSYGWNAQTGEFGDLYAQGVIDPAKVVRTALQDASSIAGLLVTTEAMIAEKPKKDAPPAMPAGAGMD 541
BLAST of CX671837 vs. ExPASy Swiss-Prot
Match: CH601_SORC5 (60 kDa chaperonin 1 OS=Sorangium cellulosum (strain So ce56) GN=groL1 PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 3.117e-27 Identity = 73/157 (46.50%), Postives = 99/157 (63.06%), Query Frame = -2 Query: 262 KEKKLRVEDALNATKAAXXXXXXXXXGCTLLRLSFKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGYG 732 KEKK RVEDAL+AT+AA G L R + ++++K NDE VG +V+RA+ PL+ IA+NAGV+G+VV+EKV S +GYNAAT +YEDL+A G+IDP KVVR + +A+SVA L ++ +V E + E A G P G G Sbjct: 390 KEKKARVEDALHATRAAVEEGIVVGGGVALFRAAASLESLKF---NDERDVGVRLVRRAVEAPLRQIAQNAGVDGTVVAEKVRSGAP-TFGYNAATDSYEDLLAGGVIDPAKVVRHAISNAASVAALMLTTEALVAEKPKKEKAAAGGAPGGMGGMG 542
BLAST of CX671837 vs. ExPASy Swiss-Prot
Match: CH60_MAGSM (60 kDa chaperonin OS=Magnetococcus sp. (strain MC-1) GN=groL PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 4.071e-27 Identity = 72/159 (45.28%), Postives = 100/159 (62.89%), Query Frame = -2 Query: 262 KEKKLRVEDALNATKAAXXXXXXXXXGCTLLRLSFKVDAIKETLD--NDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGYG 732 KE+K RV+DAL+AT+AA G LLR +A L N +++VG +IV RAL PL++IA NAG GSVV +V+ + +G+NAATG YEDL+A+G+IDP KVVR L+ A+SVA + ++ +V E+ + EPAMP G+ G G Sbjct: 390 KERKDRVDDALHATRAAVEEGIVPGGGVALLRAR---EASLTNLQGANHDQQVGINIVTRALEEPLRIIASNAGAEGSVVVNRVVETKETNFGFNAATGVYEDLVASGVIDPAKVVRHALQAAASVAGLMITTEAMVAELPKDEPAMPGGDMGGMGGMG 545
BLAST of CX671837 vs. ExPASy Swiss-Prot
Match: CH602_PROMP (60 kDa chaperonin 2 OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=groL2 PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 4.071e-27 Identity = 72/161 (44.72%), Postives = 102/161 (63.35%), Query Frame = -2 Query: 259 KEKKLRVEDALNATKAAXXXXXXXXXGCTLLRLSFKVDAIKETLD---NDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGYGY 732 K+KKLR+EDA+NATKAA G TL L+ +KE D + EE +GA+IV+ +L PL IA+NAG NG+V++E V S + G+NAATG+Y D+ AAGI+DP KV R L++A+S+A L ++C+V ++ E + A PAG P + Y Sbjct: 388 KDKKLRLEDAINATKAAVEEGIVPGGGTTLAHLA---PILKEWADKALSGEELIGANIVEASLTSPLMRIAENAGSNGAVIAENVKSKPFND-GFNAATGDYVDMSAAGIVDPAKVTRSGLQNAASIAGMVLTTECIVADLPEKKDAAPAGAPGMGGDFDY 544
BLAST of CX671837 vs. ExPASy Swiss-Prot
Match: CH602_GLUDA (60 kDa chaperonin 2 OS=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) GN=groL2 PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 4.071e-27 Identity = 66/146 (45.21%), Postives = 98/146 (67.12%), Query Frame = -2 Query: 295 KEKKLRVEDALNATKAAXXXXXXXXXGCTLLRLSFKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMP 732 KE+K RV+DALNAT+AA G L R + V ++ ND++++G DIV++AL PL+ IA+NAG +G+VV+ KVL + + +G++A G ++DL+AAGIIDPTKVVR L+ A+SV + ++ +V E EP+PA P Sbjct: 390 KERKDRVDDALNATRAAVEEGIVPGGGTALARAAEVVARLQ--FHNDDQRIGGDIVRKALQAPLRQIAENAGEDGAVVAGKVLENGAYNFGFDAQIGEFKDLVAAGIIDPTKVVRTALQDAASVGSLLITTEVLVTEKAEPKPAAP 533
BLAST of CX671837 vs. ExPASy Swiss-Prot
Match: CH601_GLOVI (60 kDa chaperonin 1 OS=Gloeobacter violaceus GN=groL1 PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 4.071e-27 Identity = 69/148 (46.62%), Postives = 100/148 (67.57%), Query Frame = -2 Query: 289 KEKKLRVEDALNATKAAXXXXXXXXXGCTLLRLSFKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAG 732 K++KLR+EDA+NATKAA G LL L+ + ++L EEK+GA I+++AL PL+ IA+NAG+ GSV++EKV + + +G+NA T YEDL+AAGIIDP KV R L++A+S+A L ++C+VV+ K + PAG Sbjct: 388 KDRKLRIEDAVNATKAAIAEGIVPGGGTALLHLAAGMGGFIDSLSG-EEKIGARIIQKALEGPLRQIAENAGLEGSVIAEKVRNLE-FNFGFNAMTNEYEDLVAAGIIDPVKVTRSALQNAASIAAMVLTTECIVVD-KPEDDKTPAG 532
BLAST of CX671837 vs. ExPASy Swiss-Prot
Match: CH60_THELT (60 kDa chaperonin OS=Thermotoga lettingae (strain ATCC BAA-301 / DSM 14385 / TMO) GN=groL PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 5.317e-27 Identity = 71/150 (47.33%), Postives = 97/150 (64.67%), Query Frame = -2 Query: 295 KEKKLRVEDALNATKAAXXXXXXXXXGCTLLRLSFKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVV----EIKEPEPAMP 732 KEKK R+EDAL+AT+AA G TL+R V+ + + LD DE KVGA IV +AL P++ IA+NAG +G+V+ EK+L+S YG++A G Y D+ AGIIDP KV R L++A+S+A L ++ +VV E KE PAMP Sbjct: 388 KEKKHRIEDALSATRAAVEEGIVPGGGVTLIRSRKAVEDVLKELDGDE-KVGAMIVYKALEAPIRQIAENAGYDGAVIIEKILASKEESYGFDALKGEYTDMFKAGIIDPAKVTRSALQNAASIAGMLLTTEVLVVEKPEEKKEAAPAMP 536
BLAST of CX671837 vs. ExPASy Swiss-Prot
Match: CH60_SYNR3 (60 kDa chaperonin OS=Synechococcus sp. (strain RCC307) GN=groL PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 5.317e-27 Identity = 73/154 (47.40%), Postives = 98/154 (63.64%), Query Frame = -2 Query: 280 KEKKLRVEDALNATKAAXXXXXXXXXGCTLLRLSFKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHK---YGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPM 732 K+KKLR+EDA+NATKAA G TL L+ + + EE +GA+IV +AL PLK IA+NAG NGSVV+E V HK G+NAA+ Y D++AAGIIDP KV R L++A+S+A L ++C+VV++ E + A PAG M Sbjct: 388 KDKKLRLEDAINATKAAVEEGIVPGGGTTLAHLAPALTEWANQNLSGEELIGANIVAQALDAPLKRIAENAGANGSVVAENV----RHKPFSEGFNAASNEYVDMLAAGIIDPAKVTRSGLQNAASIAGMVLTTECIVVDLPEKKEAAPAGGGM 537
BLAST of CX671837 vs. ExPASy Swiss-Prot
Match: CH60_DESDG (60 kDa chaperonin OS=Desulfovibrio desulfuricans (strain G20) GN=groL PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 5.317e-27 Identity = 72/156 (46.15%), Postives = 96/156 (61.54%), Query Frame = -2 Query: 268 KEKKLRVEDALNATKAAXXXXXXXXXGCTLLRLSFKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVE-IKEPEPAMPAGNPMDNSG 732 KEKK RVEDALNAT+AA G L+R +D +K +D+E G I++RA+ PL+ IA NAG GS++ EKV + +G+NAATG +EDL+AAG+IDP KV R L++A+SVA L ++C + E KE PA PA M G Sbjct: 390 KEKKDRVEDALNATRAAVEEGIVPGGGTALVRCCKVLDDVKPA--DDDEAAGVTIIRRAIEEPLRQIAANAGFEGSIICEKVKEGKD-AFGFNAATGEFEDLIAAGVIDPKKVSRIALQNAASVASLLLTTECAIAEKPKEDAPAAPAMGGMGGMG 542
BLAST of CX671837 vs. ExPASy Swiss-Prot
Match: CH60_ARCB4 (60 kDa chaperonin OS=Arcobacter butzleri (strain RM4018) GN=groL PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 5.317e-27 Identity = 72/156 (46.15%), Postives = 96/156 (61.54%), Query Frame = -2 Query: 268 KEKKLRVEDALNATKAAXXXXXXXXXGCTLLRLSFKVDAIKETLD-NDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSG 732 KEKK RV+DAL+AT+AA G L++ S KV+ LD +E++GADIV RA+ PLK IA NAG + VV+ +V S N G+NAATG Y D+ AGI+DP KV R +++A SVA L ++ V +IKE +PAMP+ M G Sbjct: 389 KEKKDRVDDALSATRAAVEEGIVIGGGAALIKASKKVN-----LDLTGDERIGADIVLRAISAPLKQIAINAGFDAGVVANEVEKSSNENLGFNAATGEYVDMFEAGIVDPAKVERVAMQNAVSVASLLLTTEATVSDIKEDKPAMPSMPDMGGMG 539 The following BLAST results are available for this feature:
BLAST of CX671837 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX671837 ID=CX671837; Name=CX671837; organism=Citrus sinensis; type=EST; length=733bpback to top |