CX671837
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX671837 vs. ExPASy Swiss-Prot
Match: CH602_PROMM (60 kDa chaperonin 2 OS=Prochlorococcus marinus (strain MIT 9313) GN=groL2 PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 5.317e-27 Identity = 68/148 (45.95%), Postives = 97/148 (65.54%), Query Frame = -2 Query: 289 KEKKLRVEDALNATKAAXXXXXXXXXGCTLLRLSFKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAG 732 K+KKLR+EDA+NATKAA G TL L+ + + + EE +G++IV+ +L PL IA+NAG NG+VV+E V S GYNAATG+Y D++AAGI+DP KV R L++A+S+A L ++C+V ++ E + A PAG Sbjct: 388 KDKKLRLEDAINATKAAVEEGIVPGGGTTLTHLASDLQKWANSNLSGEELIGSNIVEASLAAPLMRIAENAGANGAVVAENVKSRPISD-GYNAATGDYIDMLAAGIVDPAKVTRSGLQNAASIAGMVLTTECIVADLPEKKEAAPAG 534
BLAST of CX671837 vs. ExPASy Swiss-Prot
Match: CH602_ANADF (60 kDa chaperonin 2 OS=Anaeromyxobacter sp. (strain Fw109-5) GN=groL2 PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 5.317e-27 Identity = 72/155 (46.45%), Postives = 94/155 (60.65%), Query Frame = -2 Query: 268 KEKKLRVEDALNATKAAXXXXXXXXXGCTLLRLSFKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSG 732 KEKK RVEDAL+AT+AA G LR ++ +K + + EK G DIV+RAL PL+ IA N G S+V KV S + +G+NAATG+YEDL+ +G+IDPTKV R L++ASSVA L + +V E + E A PAG M G Sbjct: 390 KEKKARVEDALHATRAAVEEGIVPGGGVAYLRAVKALEGVKVS---EGEKFGLDIVRRALEEPLRQIAGNGGYEASIVVNKVKESKDTNFGFNAATGDYEDLVKSGVIDPTKVSRSALQNASSVASLMLTTMALVAEKPKEESAAPAGGGMGGMG 541
BLAST of CX671837 vs. ExPASy Swiss-Prot
Match: RUB2_BRANA (RuBisCO large subunit-binding protein subunit alpha, chloroplastic OS=Brassica napus PE=2 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 6.944e-27 Identity = 69/147 (46.94%), Postives = 99/147 (67.35%), Query Frame = -2 Query: 292 KEKKLRVEDALNATKAAXXXXXXXXXGCTLLRLSFKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPA 732 +++KLR+EDA NAT AA G TL+ LS + AIKET ++ + ++GADIV++AL LIA+NAG+ G VV EK++ S+ + GYNA T YE+L+ AG+IDP KV RC L++A+SVA L + +VV+ +P+P PA Sbjct: 432 EDRKLRIEDAKNATFAAIEEGIVPGGGATLVHLSTVIPAIKETFEDADVRLGADIVQKALVAQ-SLIAQNAGIEGEVVVEKIMFSE-WELGYNAMTDTYENLLEAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVD--KPKPKAPA 574
BLAST of CX671837 vs. ExPASy Swiss-Prot
Match: CH60_AQUAE (60 kDa chaperonin OS=Aquifex aeolicus GN=groL PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 6.944e-27 Identity = 69/143 (48.25%), Postives = 96/143 (67.13%), Query Frame = -2 Query: 313 KEKKLRVEDALNATKAAXXXXXXXXXGCTLLRLSFKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHK---YGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKE 732 KEKK RVEDA++ATKAA G L+R S ++ +K DN ++++G DI+K+A+ PLK IA NAG +GSVV EKV+ K +G+NAATG Y D+ AGIIDPTKVVR +E+A+SVA T L ++ ++ ++ E Sbjct: 390 KEKKYRVEDAVHATKAAVEEGIVPGGGVALVRASEALEDLKG--DNHDQQLGIDIIKKAVRTPLKQIAYNAGYDGSVVLEKVIELGKEKGVSWGFNAATGEYVDMYEAGIIDPTKVVRTAIENAASVAGTMLTAEALIADLPE 530
BLAST of CX671837 vs. ExPASy Swiss-Prot
Match: CH605_SINMW (60 kDa chaperonin 5 OS=Sinorhizobium medicae (strain WSM419) GN=groL5 PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 6.944e-27 Identity = 68/149 (45.64%), Postives = 92/149 (61.74%), Query Frame = -2 Query: 289 KEKKLRVEDALNATKAAXXXXXXXXXGCTLLRLSFKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEI-KEPEPAMPAG 732 KEKK R++DALNAT+AA G LLR S K+ E ND++ G +IV+RAL P + I +NAG S+V K+L D +GYNA TG Y D++A GIIDP KVVR L+ A+SVA + ++ ++ E+ K+ PAMP G Sbjct: 390 KEKKDRIDDALNATRAAVQEGIVPGGGVALLRSSVKITVKGE---NDDQDAGVNIVRRALQSPARQIVENAGDEASIVVGKILEKDTDDFGYNAQTGEYGDMIAMGIIDPVKVVRTALQDAASVASLLITTEAMIAELPKKDAPAMPGG 535
BLAST of CX671837 vs. ExPASy Swiss-Prot
Match: CH601_SINMW (60 kDa chaperonin 1 OS=Sinorhizobium medicae (strain WSM419) GN=groL1 PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 6.944e-27 Identity = 68/149 (45.64%), Postives = 92/149 (61.74%), Query Frame = -2 Query: 289 KEKKLRVEDALNATKAAXXXXXXXXXGCTLLRLSFKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEI-KEPEPAMPAG 732 KEKK R++DALNAT+AA G LLR S K+ E ND++ G +IV+RAL P + I +NAG S+V K+L D +GYNA TG Y D++A GIIDP KVVR L+ A+SVA + ++ ++ E+ K+ PAMP G Sbjct: 390 KEKKDRIDDALNATRAAVQEGIVPGGGVALLRSSVKITVKGE---NDDQDAGVNIVRRALQSPARQIVENAGDEASIVVGKILEKDTDDFGYNAQTGEYGDMIAMGIIDPVKVVRTALQDAASVASLLITTEAMIAELPKKDAPAMPGG 535
BLAST of CX671837 vs. ExPASy Swiss-Prot
Match: CH601_ERYLH (60 kDa chaperonin 1 OS=Erythrobacter litoralis (strain HTCC2594) GN=groL1 PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 6.944e-27 Identity = 69/149 (46.31%), Postives = 99/149 (66.44%), Query Frame = -2 Query: 292 KEKKLRVEDALNATKAAXXXXXXXXXGCTLLRLSFKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEI-KEPEPA-MPA 732 KE+K RV+DAL+AT+AA G LLR +D +K ND+++ G DIV+RAL P + IA+NAG +G+ + K+L D++ +G+NAATG YEDL+ +G+IDP KVVR L+ A+SVA + ++ +V E+ KE PA MPA Sbjct: 390 KERKDRVDDALHATRAAVEEGILPGGGIALLRALKSLDGLKAA--NDDQQSGIDIVRRALRAPARQIAENAGEDGAYIVGKLLEGDDYNHGFNAATGEYEDLVKSGVIDPAKVVRTALQDAASVASLLITTEALVAELPKEDTPAPMPA 536
BLAST of CX671837 vs. ExPASy Swiss-Prot
Match: CH60_WOLRE (60 kDa chaperonin OS=Wolinella recta GN=groL PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 9.070e-27 Identity = 74/157 (47.13%), Postives = 94/157 (59.87%), Query Frame = -2 Query: 268 KEKKLRVEDALNATKAAXXXXXXXXXGCTLLRLSFKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKE--PEPAMPAGNPMDNSG 732 KEKK RV+DAL+ATKAA G ++ KVD L DE +GADIV+RAL PL+ IA+NAG + VV+ V S + YG+NAATG Y D+ AGIIDP KV R L++A SVA L ++ + E+KE P PAMP + M G Sbjct: 389 KEKKDRVDDALSATKAAVEEGIVIGGGAAFIKAGAKVDL---NLSGDEA-IGADIVRRALTAPLRQIAENAGFDAGVVANSVSVSKDDNYGFNAATGEYVDMFKAGIIDPVKVERIALQNAVSVASLLLTTEATISELKEDKPMPAMPDMSGMGGMG 541
BLAST of CX671837 vs. ExPASy Swiss-Prot
Match: CH60_THEM4 (60 kDa chaperonin OS=Thermosipho melanesiensis (strain BI429 / DSM 12029) GN=groL PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 9.070e-27 Identity = 71/151 (47.02%), Postives = 93/151 (61.59%), Query Frame = -2 Query: 295 KEKKLRVEDALNATKAAXXXXXXXXXGCTLLRLSFKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPE-----PAMP 732 KEKK R+EDAL+AT+AA G TLLR V+ I E LD DE K+GA IV AL P+ IAKNAG +G+++ KVL D+ YG++A G Y D+ GIIDP KV R L++A+S+A L ++ +VVE EP+ P MP Sbjct: 388 KEKKHRIEDALSATRAAVEEGIVPGGGITLLRARKPVEKIVEELDGDE-KIGAKIVYEALSAPINQIAKNAGYDGAIIIHKVLEQDDPAYGFDALKGEYCDMFERGIIDPAKVTRSALQNAASIAGMLLTTEVLVVEKPEPKNNNPMPEMP 537
BLAST of CX671837 vs. ExPASy Swiss-Prot
Match: CH602_NITWN (60 kDa chaperonin 2 OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) GN=groL2 PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 9.070e-27 Identity = 65/151 (43.05%), Postives = 99/151 (65.56%), Query Frame = -2 Query: 289 KEKKLRVEDALNATKAAXXXXXXXXXGCTLLRLSFKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEI---KEPEPAMPAG 732 KE+K RV+DA++AT+AA G LLR S ++ IK ND++K G +IV++AL P + IA NAG +GSV+ K+L + + YG+++ TG+Y +L++ GIIDPTKVVR +++A+SVA + ++ +V E+ P PAMP G Sbjct: 390 KERKDRVDDAMHATRAAVEEGIVPGGGVALLRASEQLKRIKT--QNDDQKTGVEIVRKALSAPARQIAINAGEDGSVIVGKILEKEQYSYGFDSQTGDYGNLISKGIIDPTKVVRTAIQNAASVASLLITTEAMVAELPKKNSPAPAMPGG 538 The following BLAST results are available for this feature:
BLAST of CX671837 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX671837 ID=CX671837; Name=CX671837; organism=Citrus sinensis; type=EST; length=733bpback to top |