CX671833

Overview
NameCX671833
Unique NameCX671833
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length845
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671833 vs. ExPASy Swiss-Prot
Match: BH007_ARATH (Transcription factor bHLH7 OS=Arabidopsis thaliana GN=BHLH7 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.656e-12
Identity = 37/74 (50.00%), Postives = 56/74 (75.68%), Query Frame = -1
Query:  360 HFQGSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQDLFPNMDKQTNTAEMLDLAVEHIKDLQKQVKLLT 581
            H Q ++  ++RA+RG AT P SIAER+RR RI+ER+R LQ+L P ++K T+ A M+D  V+++K L+ QVK+L+
Sbjct:  135 HQQSTIRPRVRARRGQATDPHSIAERLRRERIAERIRSLQELVPTVNK-TDRAAMIDEIVDYVKFLRLQVKVLS 207          
BLAST of CX671833 vs. ExPASy Swiss-Prot
Match: BH063_ARATH (Transcription factor bHLH63 OS=Arabidopsis thaliana GN=BHLH63 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.037e-11
Identity = 43/110 (39.09%), Postives = 64/110 (58.18%), Query Frame = -1
Query:  360 TQNGNSGNQSTRLVHHLSLPKT---SAEMAAVEKFLHFQGSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQDLFPNMDKQTNTAEMLDLAVEHIKDLQKQVKLLT 680
            T+  N   +S + + H +  +    S + + V K L     +   +RA+RG AT   SIAERVRR +ISERM+ LQDL P  DK T  A MLD  + +++ LQ+Q++ L+
Sbjct:  129 TEQNNGSTKSIKKMKHKAKKEENNFSNDSSKVTKELEKTDYI--HVRARRGQATDSHSIAERVRREKISERMKFLQDLVPGCDKITGKAGMLDEIINYVQSLQRQIEFLS 236          
BLAST of CX671833 vs. ExPASy Swiss-Prot
Match: UNE12_ARATH (Transcription factor UNE12 OS=Arabidopsis thaliana GN=UNE12 PE=2 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 2.311e-11
Identity = 37/74 (50.00%), Postives = 55/74 (74.32%), Query Frame = -1
Query:  360 HFQGSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQDLFPNMDKQTNTAEMLDLAVEHIKDLQKQVKLLT 581
            H   S+  ++RA+RG AT P SIAER+RR RI+ER+R LQ+L P ++K T+ A M+D  V+++K L+ QVK+L+
Sbjct:  137 HQPTSIRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNK-TDRAAMIDEIVDYVKFLRLQVKVLS 209          
BLAST of CX671833 vs. ExPASy Swiss-Prot
Match: BH049_ARATH (Transcription factor bHLH49 OS=Arabidopsis thaliana GN=BHLH49 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.018e-11
Identity = 34/65 (52.31%), Postives = 48/65 (73.85%), Query Frame = -1
Query:  360 IRAKRGCATHPRSIAERVRRTRISERMRKLQDLFPNMDKQTNTAEMLDLAVEHIKDLQKQVKLLT 554
            +RA+RG AT+  S+AERVRR +ISERM+ LQDL P  +K T  A MLD  + +++ LQ+QV+ L+
Sbjct:  303 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLS 367          
BLAST of CX671833 vs. ExPASy Swiss-Prot
Match: BH137_ARATH (Transcription factor bHLH137 OS=Arabidopsis thaliana GN=BHLH137 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.148e-11
Identity = 35/65 (53.85%), Postives = 46/65 (70.77%), Query Frame = -1
Query:  360 IRAKRGCATHPRSIAERVRRTRISERMRKLQDLFPNMDKQTNTAEMLDLAVEHIKDLQKQVKLLT 554
            +RA+RG AT   S+AERVRR +ISERMR LQ+L P  DK T  A MLD  + +++ LQ QV+ L+
Sbjct:  136 VRARRGQATDSHSLAERVRREKISERMRTLQNLVPGCDKVTGKALMLDEIINYVQTLQTQVEFLS 200          
BLAST of CX671833 vs. ExPASy Swiss-Prot
Match: BH062_ARATH (Transcription factor bHLH62 OS=Arabidopsis thaliana GN=BHLH62 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.148e-11
Identity = 34/65 (52.31%), Postives = 47/65 (72.31%), Query Frame = -1
Query:  360 IRAKRGCATHPRSIAERVRRTRISERMRKLQDLFPNMDKQTNTAEMLDLAVEHIKDLQKQVKLLT 554
            +RA+RG AT   S+AERVRR +ISERM+ LQDL P  +K T  A MLD  + +++ LQ+QV+ L+
Sbjct:  258 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLS 322          
BLAST of CX671833 vs. ExPASy Swiss-Prot
Match: BH076_ARATH (Transcription factor bHLH76 OS=Arabidopsis thaliana GN=BHLH76 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 6.723e-11
Identity = 34/65 (52.31%), Postives = 47/65 (72.31%), Query Frame = -1
Query:  360 IRAKRGCATHPRSIAERVRRTRISERMRKLQDLFPNMDKQTNTAEMLDLAVEHIKDLQKQVKLLT 554
            +RA+RG AT+  S+AERVRR +ISERM+ LQDL P  DK T  A MLD  + +++ LQ Q++ L+
Sbjct:  223 MRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCDKVTGKAVMLDEIINYVQSLQCQIEFLS 287          
The following BLAST results are available for this feature:
BLAST of CX671833 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 17
Match NameE-valueIdentityDescription
BH007_ARATH4.656e-1250.00Transcription factor bHLH7 OS=Arabidopsis thaliana... [more]
BH063_ARATH1.037e-1139.09Transcription factor bHLH63 OS=Arabidopsis thalian... [more]
UNE12_ARATH2.311e-1150.00Transcription factor UNE12 OS=Arabidopsis thaliana... [more]
BH049_ARATH3.018e-1152.31Transcription factor bHLH49 OS=Arabidopsis thalian... [more]
BH137_ARATH5.148e-1153.85Transcription factor bHLH137 OS=Arabidopsis thalia... [more]
BH062_ARATH5.148e-1152.31Transcription factor bHLH62 OS=Arabidopsis thalian... [more]
BH076_ARATH6.723e-1152.31Transcription factor bHLH76 OS=Arabidopsis thalian... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_13D08_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-13D08-G15-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671833 ID=CX671833; Name=CX671833; organism=Citrus sinensis; type=EST; length=845bp
TTTTTTTTTTTTTTTTTCAAACTTTCGGCCAACAGCTAAAAGATTGTACT
TTGTATTGAAGAAATCATGGATGAAGAAGCTTAATACAATTAATCTACGT
GAAGAGAATCAAAGCAAGACAATCACTCTACTCAACTGGATCTTACAATA
AATTACAACAGCAATCTTTTCAACCCGCTAAATCTCACTCGCTATCCTAT
TATTTTTTTAAGGGCAGTGGAAATGAGGAGTCATCTTTCTTTTTCATCTC
ACAAGTAGCAGCTTCCTTAAGCTATCTGTACAGATACAAGTCTACCGGAA
GTTTTTGTAATTCAACATAGCTTTTGTTTGTTTGGGCACATGCATTTTGC
CTTATTGTCCGTGAGTAACTTGACTTGTTTCTGAAGATCTTTAATGTGTT
CAACTGCCAGATCTAACATTTCAGCTGTGTTTGTTTGCTTGTCCATGTTT
GGGAAAAGGTCTTGCAATTTCCTCATTCGTTCACTTATCCGAGTTCTTCT
AACCCTCTCGGCAATGCTTCTTGGATGAGTGGCACAACCTCTCTTGGCTC
GAATCTTGCAAGGAACAGAACCTTGAAAATGCAAAAACTTCTCCACAGCA
GCCATTTCAGCAGATGTTTTTGGTAAGCTCAAATGGTGGACCAAGCGAGT
AGATTGGTTTCCAGAATTTCCATTCTGAGTTTCATATGCGTCTAGACCAA
AAGACATGTTGCAAGTACTGTCTCTAGCCCTCTTAACACCACTGAATGAA
GCATCATCCCAAGGATCGCTTGGAAAATTGGGCATGTATTGTCTACTGGC
ACCATTATTGCCCACAAAGTTTTTCTCTGGGCTACTATTCCCCAT
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