CX671832

Overview
NameCX671832
Unique NameCX671832
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length878
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671832 vs. ExPASy Swiss-Prot
Match: SRK6_BRAOE (Putative serine/threonine-protein kinase receptor OS=Brassica oleracea var. acephala GN=SRK6 PE=2 SV=1)

HSP 1 Score: 245.743 bits (626), Expect = 2.510e-64
Identity = 125/214 (58.41%), Postives = 154/214 (71.96%), Query Frame = 1
Query:    1 LDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNCVVGTYGYMAPEYASDWQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHAWKLWNEGMPSQLIDPCIQDS-------FNLAEVIRCIHIGLLCVQQHPKDRPSMPSVILMLGSE-TVLPQPKQPGYLAHRKSTGQDYSSS 618
            L+W++RF I  G ARG++YLHQDSR RIIHRDLK SN+LLD++M PKISDFG+AR F  DETE NT  VVGTYGYM+PEYA    FS KSDVFSFG+++LEI+SGKKNRGFY+ D + +L+ + W  W EG   +++DP I DS       F   EV++CI IGLLCVQ+  + RP+M SV+ M GSE T +PQPK PGY   R     D SSS
Sbjct:  622 LNWNERFDITNGVARGLLYLHQDSRFRIIHRDLKVSNILLDKNMIPKISDFGMARIFERDETEANTMKVVGTYGYMSPEYAMYGIFSEKSDVFSFGVIVLEIVSGKKNRGFYNLDYENDLLSYVWSRWKEGRALEIVDPVIVDSLSSQPSIFQPQEVLKCIQIGLLCVQELAEHRPAMSSVVWMFGSEATEIPQPKPPGYCVRRSPYELDPSSS 835          
BLAST of CX671832 vs. ExPASy Swiss-Prot
Match: CRK18_ARATH (Cysteine-rich receptor-like protein kinase 18 OS=Arabidopsis thaliana GN=CRK18 PE=2 SV=2)

HSP 1 Score: 244.973 bits (624), Expect = 4.281e-64
Identity = 126/228 (55.26%), Postives = 159/228 (69.74%), Query Frame = 1
Query:    1 LDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNCVVGTYGYMAPEYASDWQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKL-NLIGHAWKLWNEGMPSQLIDPCIQDSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSVILML-GSETVLPQPKQPGYLAHRKSTGQDYSSSTPES--CSTNTITISELEGR 672
            LDW+ R +II G  RG++YLHQDSRL+IIHRDLKASN+LLD DMNPKI+DFG+AR FG D+T  NT  VVGT+GYM+PEY +  QFS+KSDV+SFG+L+LEIISGKKN  FY  D  + NL+ + WKLW      +L+DP I   F   EVIR IHIGLLCVQ++P DRP+M ++  ML  S   LP P  PG+   R   G +   S  +S  CS +  TI+++  R
Sbjct:  433 LDWTMRRNIIGGITRGILYLHQDSRLKIIHRDLKASNILLDADMNPKIADFGMARIFGVDQTVANTGRVVGTFGYMSPEYVTHGQFSMKSDVYSFGVLILEIISGKKNSSFYQMDGLVNNLVTYVWKLWENKSLHELLDPFINQDFTSEEVIRYIHIGLLCVQENPADRPTMSTIHQMLTNSSITLPVPLPPGFF-FRNGPGSNPGQSNSKSFACSVDEATITDVNPR 659          
BLAST of CX671832 vs. ExPASy Swiss-Prot
Match: CRK20_ARATH (Putative cysteine-rich receptor-like protein kinase 20 OS=Arabidopsis thaliana GN=CRK20 PE=2 SV=2)

HSP 1 Score: 243.817 bits (621), Expect = 9.536e-64
Identity = 116/222 (52.25%), Postives = 158/222 (71.17%), Query Frame = 1
Query:    1 LDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNCVVGTYGYMAPEYASDWQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKL-NLIGHAWKLWNEGMPSQLIDPCIQDSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSVILMLGSETV-LPQPKQPGYLAHRKSTGQDYSSSTPESCSTNTITISE 660
            LDWS+R+ II G ARG++YLHQDSRL IIHRDLKA N+LLD DMNPK++DFG+AR FG D+TE NT  VVGTYGYMAPEYA   +FS+KSDV+SFG+L+LEI+SG KN      D  + NL+ + W+LW+ G PS+L+DP   D++  +E+ RCIHI LLCVQ+   DRP+M +++ ML + ++ L  P+ PG+    K   +    + P   +++  +I E
Sbjct:  438 LDWSRRYKIIGGIARGILYLHQDSRLTIIHRDLKAGNILLDADMNPKVADFGMARIFGMDQTEANTRRVVGTYGYMAPEYAMYGKFSMKSDVYSFGVLVLEIVSGMKNSSLDQMDGSISNLVTYTWRLWSNGSPSELVDPSFGDNYQTSEITRCIHIALLCVQEDANDRPTMSAIVQMLTTSSIALAVPRPPGFFLRSKQ--EQAERACPSMDTSDLFSIDE 657          
BLAST of CX671832 vs. ExPASy Swiss-Prot
Match: CRK11_ARATH (Cysteine-rich receptor-like protein kinase 11 OS=Arabidopsis thaliana GN=CRK11 PE=2 SV=2)

HSP 1 Score: 243.432 bits (620), Expect = 1.245e-63
Identity = 120/221 (54.30%), Postives = 158/221 (71.49%), Query Frame = 1
Query:    1 LDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNCVVGTYGYMAPEYASDWQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKL---NLIGHAWKLWNEGMPSQLIDPCIQDSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSVILMLGSETV-LPQPKQPGYLAHRK-----STGQDYSSSTPESCS 636
            LDW++R+ II G ARG++YLHQDSRL+IIHRDLKASN+LLD DMNPKI+DFGLA  FG ++T+GNTN + GTY YM+PEYA   Q+S+KSD++SFG+L+LEIISGKKN G Y  D      NL+ +A +LW    P +L+DP    ++   EV RCIHI LLCVQ++P+DRP + ++ILML S T+ LP P+ PG+    +     S G +    T +S S
Sbjct:  444 LDWTRRYKIIGGIARGILYLHQDSRLKIIHRDLKASNILLDADMNPKIADFGLATIFGVEQTQGNTNRIAGTYAYMSPEYAMHGQYSMKSDIYSFGVLVLEIISGKKNSGVYQMDETSTAGNLVTYASRLWRNKSPLELVDPTFGRNYQSNEVTRCIHIALLCVQENPEDRPMLSTIILMLTSNTITLPVPRLPGFFPRSRQLKLVSEGSESDQYTSKSSS 664          
BLAST of CX671832 vs. ExPASy Swiss-Prot
Match: CRK12_ARATH (Putative cysteine-rich receptor-like protein kinase 12 OS=Arabidopsis thaliana GN=CRK12 PE=2 SV=2)

HSP 1 Score: 243.047 bits (619), Expect = 1.627e-63
Identity = 121/230 (52.61%), Postives = 161/230 (70.00%), Query Frame = 1
Query:    1 LDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNCVVGTYGYMAPEYASDWQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKL-NLIGHAWKLWNEGMPSQLIDPCIQDSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSVILML-GSETVLPQPKQPG-YLAHRKSTGQDYSSSTPESCST---NTITISELEGR 672
            LDW+KR++II G  RG++YLHQDSRL IIHRDLKASN+LLD DM PKI+DFG+AR  G D++  NT  + GT+GYM PEY    QFS+KSDV+SFG+L+LEII GKKNR FY +D K  NL+ + W+LW  G P +L+D  I ++    EVIRCIHI LLCVQ+ PKDRP++ ++++ML  S  +L  P+ PG ++   K      SS     C++   N +TI+ L+ R
Sbjct:  461 LDWTKRYNIIGGITRGILYLHQDSRLTIIHRDLKASNILLDADMIPKIADFGMARISGIDQSVANTKRIAGTFGYMPPEYVIHGQFSMKSDVYSFGVLILEIICGKKNRSFYQADTKAENLVTYVWRLWTNGSPLELVDLTISENCQTEEVIRCIHIALLCVQEDPKDRPNLSTIMMMLTNSSLILSVPQPPGFFVPQNKERDSFLSSQFTMGCTSQTKNDVTITNLDPR 690          
BLAST of CX671832 vs. ExPASy Swiss-Prot
Match: CRK4_ARATH (Cysteine-rich receptor-like protein kinase 4 OS=Arabidopsis thaliana GN=CRK4 PE=2 SV=1)

HSP 1 Score: 241.506 bits (615), Expect = 4.733e-63
Identity = 119/232 (51.29%), Postives = 161/232 (69.40%), Query Frame = 1
Query:    1 LDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNCVVGTYGYMAPEYASDWQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKL--NLIGHAWKLWNEGMPSQLIDPCIQDSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSVILMLGSETV-LPQPKQPGYLAHRKSTGQ-----DYSSSTPESCSTNTITISELEGR 672
            LDW++R+ II G ARG++YLHQDSRL IIHRDLKA N+LL  DMN KI+DFG+AR FG D+TE NT  +VGTYGYM+PEYA   QFS+KSDV+SFG+L+LEIISGKKN   Y  D     NL+ + W+LW+ G P +L+DP  +D++ + EV RCIHI LLCVQ+  +DRP+M +++ ML + ++ L  P++PG+        Q       S +T   CS +  +I+ +  R
Sbjct:  445 LDWTRRYKIIGGIARGILYLHQDSRLTIIHRDLKAGNILLGDDMNAKIADFGMARIFGMDQTEANTRRIVGTYGYMSPEYAMYGQFSMKSDVYSFGVLVLEIISGKKNSNVYQMDGTSAGNLVTYTWRLWSNGSPLELVDPSFRDNYRINEVSRCIHIALLCVQEEAEDRPTMSAIVQMLTTSSIALAVPQRPGFFFRSSKHEQVGLVDRLSINTSALCSVDDASITNVTPR 676          
BLAST of CX671832 vs. ExPASy Swiss-Prot
Match: CRK21_ARATH (Cysteine-rich receptor-like protein kinase 21 OS=Arabidopsis thaliana GN=CRK21 PE=1 SV=1)

HSP 1 Score: 241.506 bits (615), Expect = 4.733e-63
Identity = 122/234 (52.14%), Postives = 163/234 (69.66%), Query Frame = 1
Query:    1 LDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNCVVGTYGYMAPEYASDWQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKL-NLIGHAWKLWNEGMPSQLIDPCIQDSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSVILMLGSETV-LPQPKQPGYLAHRKSTGQDY--------SSSTPESCSTNTITISELEGR 672
            LDW +R +II G  RG++YLHQDSRL IIHRDLKASN+LLD +MNPKI+DFGLAR F  ++TE NT  VVGT+GYM PEY ++ QFS KSDV+SFG+L+LEII GKKN  F+  D  + NL+ H W+L N G   +L+DP I ++++  EVIRCIHIGLLCVQ++P DRPSM ++  ML + ++ LP P+ PG+    +S             S+S   +CS +  +I+ +  R
Sbjct:  457 LDWPRRHNIIEGITRGILYLHQDSRLTIIHRDLKASNILLDAEMNPKIADFGLARNFRVNQTEANTGRVVGTFGYMPPEYVANGQFSTKSDVYSFGVLILEIIGGKKNSSFHQIDGSVSNLVTHVWRLRNNGSLLELVDPAIGENYDKDEVIRCIHIGLLCVQENPDDRPSMSTIFRMLTNVSITLPVPQPPGFFFRERSEPNPLAERLLPGPSTSMSFTCSVDDASITSVRPR 690          
BLAST of CX671832 vs. ExPASy Swiss-Prot
Match: CRK14_ARATH (Cysteine-rich receptor-like protein kinase 14 OS=Arabidopsis thaliana GN=CRK14 PE=2 SV=2)

HSP 1 Score: 240.736 bits (613), Expect = 8.073e-63
Identity = 120/231 (51.95%), Postives = 164/231 (71.00%), Query Frame = 1
Query:    1 LDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNCVVGTYGYMAPEYASDWQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKL-NLIGHAWKLWNEGMPSQLIDPCIQDSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSVILML-GSETVLPQPKQPGY----LAHRKSTGQD-YSSSTPESCSTNTITISELEGR 672
            LDW+KR++II G  RG++YLHQDSRL IIHRDLKASN+LLD DMNPKI+DFG+AR FG D++  NT  + GT GYM PEY    QFS +SDV+SFG+L+LEII G+ NR  + SD  + NL+ +AW+LW    P +L+DP I ++    EV RCIHI LLCVQ +P DRPS+ ++ +ML  +  VLP P+QPG+    +++++  G D  + S P+  + N +TI++ E R
Sbjct:  430 LDWTKRYNIIRGITRGILYLHQDSRLTIIHRDLKASNILLDADMNPKIADFGMARIFGIDQSGANTKKIAGTRGYMPPEYVRQGQFSTRSDVYSFGVLVLEIICGRNNRFIHQSDTTVENLVTYAWRLWRNDSPLELVDPTISENCETEEVTRCIHIALLCVQHNPTDRPSLSTINMMLINNSYVLPDPQQPGFFFPIISNQERDGLDSMNRSNPQ--TINDVTITDFEPR 658          
BLAST of CX671832 vs. ExPASy Swiss-Prot
Match: CRK23_ARATH (Putative cysteine-rich receptor-like protein kinase 23 OS=Arabidopsis thaliana GN=CRK23 PE=2 SV=1)

HSP 1 Score: 240.35 bits (612), Expect = 1.054e-62
Identity = 114/194 (58.76%), Postives = 145/194 (74.74%), Query Frame = 1
Query:    1 LDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNCVVGTYGYMAPEYASDWQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKL-NLIGHAWKLWNEGMPSQLIDPCIQDSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSVILML-GSETVLPQPKQPGY 576
            LDW++R+ II G ARG++YLHQDSRL IIHRDLKA N+LLD DMNPK++DFG+AR FG D+TE NT  VVGTYGYMAPEYA   QFS+KSDV+SFG+L+ EIISG KN   Y  D+ + NL+ + W+LW+ G    L+DP   D++   ++ RCIHI LLCVQ+   DRP+M +++ ML  S  VL  PKQPG+
Sbjct:  602 LDWTRRYKIIGGIARGILYLHQDSRLTIIHRDLKAGNILLDADMNPKVADFGMARIFGMDQTEANTRRVVGTYGYMAPEYAMYGQFSMKSDVYSFGVLVFEIISGMKNSSLYQMDDSVSNLVTYTWRLWSNGSQLDLVDPSFGDNYQTHDITRCIHIALLCVQEDVDDRPNMSAIVQMLTTSSIVLAVPKQPGF 795          
BLAST of CX671832 vs. ExPASy Swiss-Prot
Match: CRK17_ARATH (Cysteine-rich receptor-like protein kinase 17 OS=Arabidopsis thaliana GN=CRK17 PE=2 SV=2)

HSP 1 Score: 237.654 bits (605), Expect = 6.834e-62
Identity = 122/223 (54.71%), Postives = 159/223 (71.30%), Query Frame = 1
Query:    1 LDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNCVVGTYGYMAPEYASDWQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKL-NLIGHAWKLWNEGMPSQLIDPCIQDSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSVILMLGSETV-LPQPKQPGYLAHRKSTGQDYSSS--TPESCSTNTITIS 657
            LDW+ R +II G  RG++YLHQDSRL+IIHRDLKASN+LLD DMNPKI+DFG+AR FG D+T  NT  VVGT+GYM+PEY +  QFS+KSDV+SFG+L+LEIISGKKN  FY  D  + NL+ + WKLW      +LIDP I++     EVIR +HIGLLCVQ++P DRP+M ++  +L + ++ LP P+ PG+   R   G + SS    P   S+ + T S
Sbjct:  453 LDWTVRRNIIGGITRGILYLHQDSRLKIIHRDLKASNILLDADMNPKIADFGMARIFGVDQTVANTARVVGTFGYMSPEYVTHGQFSMKSDVYSFGVLILEIISGKKNSSFYQMDGLVNNLVTYVWKLWENKTMHELIDPFIKEDCKSDEVIRYVHIGLLCVQENPADRPTMSTIHQVLTTSSITLPVPQPPGFF-FRNGPGSNPSSQGMVPGQSSSKSFTSS 674          
The following BLAST results are available for this feature:
BLAST of CX671832 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 367
Match NameE-valueIdentityDescription
SRK6_BRAOE2.510e-6458.41Putative serine/threonine-protein kinase receptor ... [more]
CRK18_ARATH4.281e-6455.26Cysteine-rich receptor-like protein kinase 18 OS=A... [more]
CRK20_ARATH9.536e-6452.25Putative cysteine-rich receptor-like protein kinas... [more]
CRK11_ARATH1.245e-6354.30Cysteine-rich receptor-like protein kinase 11 OS=A... [more]
CRK12_ARATH1.627e-6352.61Putative cysteine-rich receptor-like protein kinas... [more]
CRK4_ARATH4.733e-6351.29Cysteine-rich receptor-like protein kinase 4 OS=Ar... [more]
CRK21_ARATH4.733e-6352.14Cysteine-rich receptor-like protein kinase 21 OS=A... [more]
CRK14_ARATH8.073e-6351.95Cysteine-rich receptor-like protein kinase 14 OS=A... [more]
CRK23_ARATH1.054e-6258.76Putative cysteine-rich receptor-like protein kinas... [more]
CRK17_ARATH6.834e-6254.71Cysteine-rich receptor-like protein kinase 17 OS=A... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_13D07_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-13D07-G13-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671832 ID=CX671832; Name=CX671832; organism=Citrus sinensis; type=EST; length=878bp
TTGGATTGGTCCAAGCGTTTCCACATTATTTGTGGGACTGCTAGGGGTGT
TATGTACCTTCATCAAGATTCTAGATTGAGGATTATACATCGAGATCTCA
AAGCAAGTAATGTGCTACTCGATCAAGATATGAACCCAAAAATTTCGGAT
TTTGGTTTGGCAAGAGCTTTTGGTGGAGACGAGACAGAAGGAAATACAAA
CTGCGTAGTTGGAACATACGGTTATATGGCACCGGAATATGCTAGTGATT
GGCAATTCTCAGTAAAATCCGATGTCTTCAGCTTTGGAATTTTATTGCTG
GAGATAATAAGTGGAAAGAAAAATAGAGGATTTTATCATTCCGACAACAA
GCTTAACCTTATAGGACATGCATGGAAGTTGTGGAACGAAGGCATGCCTT
CACAATTAATCGATCCATGTATTCAAGACTCATTCAATCTTGCTGAAGTG
ATACGATGCATCCACATCGGTTTGTTATGCGTGCAACAGCATCCAAAGGA
CAGGCCAAGCATGCCCTCAGTGATTTTGATGTTGGGCAGCGAGACTGTGT
TGCCTCAGCCAAAGCAACCCGGTTACTTGGCGCACAGGAAATCTACCGGA
CAAGATTATTCATCAAGCACGCCTGAATCATGTTCAACTAATACAATTAC
GATCTCTGAGTTGGAGGGTCGGTAGAGAATCTATTTGTGGTATCATGCCT
TGTTCTACATTGTCAAGTGCAAAAGCAGTAATATGTCAACCAAATGGAAA
GTTAAGATAAATGATTGGATAAAAAATGATGAGGATCATCCAGTGAATGC
ATGTTGTGGATCTAAAAGTTCAGAGGACATGCCAATTTTGCAGCTGACTA
CTTGGCTAAAATGCAGGCTCTATACCTC
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