CX671832

Overview
NameCX671832
Unique NameCX671832
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length878
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671832 vs. ExPASy Swiss-Prot
Match: CRI4_MAIZE (Putative receptor protein kinase CRINKLY4 OS=Zea mays GN=CR4 PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 1.218e-26
Identity = 78/232 (33.62%), Postives = 119/232 (51.29%), Query Frame = 1
Query:    1 LDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNCVVGTYGYMAPEYASDWQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHAWKLWNEGMPSQLIDPCIQDSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSV--------ILMLGSETVLPQPKQPGYLAHRKSTGQDYSS-STPESCSTNTITISELEG 669
            L+W++R  I    ARG+ YLH  +   +IHRD+K+SN+L+D+D N +++DFGL+     D     +    GT GY+ PEY      + KSDV+SFG++LLEI+SG+K       +   N++  A  L   G    ++DP +    +L  + +   +   CV+   KDRPSM  V         L++GS  +  QP  P  +    S     S  S+  SCS N +   E +G
Sbjct:  603 LNWARRVTIAVQAARGIEYLHGYACPPVIHRDIKSSNILIDEDHNARVADFGLSILGPADSGTPLSELPAGTLGYLDPEYYRLHYLTTKSDVYSFGVVLLEILSGRKAIDMQFEEG--NIVEWAVPLIKAGDIFAILDPVLSPPSDLEALKKIASVACKCVRMRGKDRPSMDKVTTALEHALALLMGSPCI-EQPILPTEVVLGSSRMHKVSQMSSNHSCSENELADGEDQG 831          
BLAST of CX671832 vs. ExPASy Swiss-Prot
Match: APK1A_ARATH (Protein kinase APK1A, chloroplastic OS=Arabidopsis thaliana GN=APK1A PE=2 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 2.077e-26
Identity = 68/177 (38.42%), Postives = 106/177 (59.89%), Query Frame = 1
Query:    1 LDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFG-GDETEGNTNCVVGTYGYMAPEYASDWQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHAWK-LWNEGMPSQLIDPCIQDSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSVI 525
            L W  R  +  G A+G+ +LH  S  R+I+RD K SN+LLD + N K+SDFGLA+    GD++  +T  V+GT+GY APEY +    + KSDV+SFG++LLE++SG++         + NL+  A   L N+    ++ID  +QD +++ E  +   + L C+    K RP+M  V+
Sbjct:  173 LSWKLRLKVALGAAKGLAFLHS-SETRVIYRDFKTSNILLDSEYNAKLSDFGLAKDGPIGDKSHVSTR-VMGTHGYAAPEYLATGHLTTKSDVYSFGVVLLELLSGRRAVDKNRPSGERNLVEWAKPYLVNKRKIFRVIDNRLQDQYSMEEACKVATLSLRCLTTEIKLRPNMSEVV 347          
BLAST of CX671832 vs. ExPASy Swiss-Prot
Match: Y5613_ARATH (Probable receptor-like protein kinase At5g61350 OS=Arabidopsis thaliana GN=At5g61350 PE=2 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 2.712e-26
Identity = 68/199 (34.17%), Postives = 110/199 (55.28%), Query Frame = 1
Query:    1 LDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNCVVGTYGYMAPEYASDWQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHAWKLWNEGMPSQLIDPCIQDSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSVILMLGSETVLPQPKQPGYLAHRKST 597
            L W +R  I  G+ARG+ YLH  +   IIHRD+K +N+LLD+++  K+SDFGL++    DE   +T  V G++GY+ PEY    Q + KSDV+SFG++L E++  +          ++NL  +A  L  +GM  ++IDP I  + +   + + +     C+ ++  DRP M  V+  L     L +      L+  K+T
Sbjct:  624 LSWKQRLEICIGSARGLHYLHTGAAQGIIHRDVKTTNILLDENLVAKVSDFGLSKDAPMDEGHVST-AVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLFEVLCARPVINPQLPREQVNLAEYAMNLHRKGMLEKIIDPKIVGTISKGSLRKFVEAAEKCLAEYGVDRPGMGDVLWNLEYALQLQEASAQVDLSEDKTT 821          
BLAST of CX671832 vs. ExPASy Swiss-Prot
Match: Y2197_ARATH (Probable protein kinase At2g41970 OS=Arabidopsis thaliana GN=At2g41970 PE=2 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 2.712e-26
Identity = 65/178 (36.52%), Postives = 101/178 (56.74%), Query Frame = 1
Query:    1 LDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNCVVGTYGYMAPEYASDWQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHAWKLWNEGMPSQLIDPCIQDSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSVILML 534
            L+W++R  I  G A+G+ +LH+  +  I+HRD+++SNVLL  D   K++DF L  A        ++  V+GT+GY APEYA   Q + KSDV+SFG++LLE+++G+K         + +L+  A    +E    Q IDP + + F    V +   +  LCVQ     RP+M  V+  L
Sbjct:  173 LNWNQRVKIAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFVAKMADFNLTNASSDTAARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVDHTMPKGQQSLVTWATPRLSEDKVKQCIDPKLNNDFPPKAVAKLAAVAALCVQYEADFRPNMTIVVKAL 350          
BLAST of CX671832 vs. ExPASy Swiss-Prot
Match: WAKLB_ARATH (Wall-associated receptor kinase-like 2 OS=Arabidopsis thaliana GN=WAKL2 PE=2 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 2.712e-26
Identity = 62/178 (34.83%), Postives = 99/178 (55.62%), Query Frame = 1
Query:    1 LDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNCVVGTYGYMAPEYASDWQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHAWKLWNEGMPSQLIDPCIQDSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSVILML 534
            + W  R HI    A  + YLH  +   I HRD+K +N+LLD+    K+SDFG +R+   D+T   T  V GT+GY+ PEY    +F+ KSDV+SFG++L+E+++G+K      S+    L  H  +   E     ++D  I+D  N+ +V+   ++   C+ +  K RP+M  V + L
Sbjct:  510 MTWEVRLHIAIEIAGALSYLHSAASFPIYHRDIKTTNILLDERNRAKVSDFGTSRSVTIDQTHLTTQ-VAGTFGYVDPEYFQSSKFTEKSDVYSFGVVLVELLTGEKPSSRVRSEENRGLAAHFVEAVKENRVLDIVDDRIKDECNMDQVMSVANLARRCLNRKGKKRPNMREVSIEL 686          
BLAST of CX671832 vs. ExPASy Swiss-Prot
Match: PSKR1_DAUCA (Phytosulfokine receptor 1 OS=Daucus carota GN=PSKR PE=1 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 2.712e-26
Identity = 63/178 (35.39%), Postives = 98/178 (55.06%), Query Frame = 1
Query:    1 LDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNCVVGTYGYMAPEYASDWQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHAWKLWNEGMPSQLIDPCIQDSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSVILML 534
            LDW  R  I  G A G+ YLHQ     I+HRD+K+SN+LL       ++DFGLAR     +T   T+ +VGT GY+ PEY      + K DV+SFG++LLE+++G++           +LI    ++  E   S++ DP I D  +  E++  + I   C+ ++PK RP+   ++  L
Sbjct:  838 LDWKTRLRIARGAAEGLAYLHQSCEPHILHRDIKSSNILLSDTFVAHLADFGLARLILPYDTHVTTD-LVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGRRPMDVCKPRGSRDLISWVLQMKTEKRESEIFDPFIYDKDHAEEMLLVLEIACRCLGENPKTRPTTQQLVSWL 1014          
BLAST of CX671832 vs. ExPASy Swiss-Prot
Match: NORK_MEDTR (Nodulation receptor kinase OS=Medicago truncatula GN=NORK PE=1 SV=2)

HSP 1 Score: 119.398 bits (298), Expect = 2.712e-26
Identity = 65/185 (35.14%), Postives = 102/185 (55.14%), Query Frame = 1
Query:    1 LDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNCVV-GTYGYMAPEYASDWQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHAWKLWNEGMPSQLIDPCIQDSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSVILMLGSETVL 552
            LDW  R  I  G ARG+ YLH      +IHRD+K+SN+LLDQ M  K++DFG ++ +   E +   +  V GT GY+ PEY    Q S KSDVFSFG++LLEI+SG++         + +L+  A          +++DP I+  ++   + R + + L C++ +   RP M  ++  L    ++
Sbjct:  691 LDWPTRLSIALGAARGLAYLHTFPGRSVIHRDVKSSNILLDQSMCAKVADFGFSK-YAPQEGDSYVSLEVRGTAGYLDPEYYKTQQLSEKSDVFSFGVVLLEIVSGREPLNIKRPRIEWSLVEWAKPYIRASKVDEIVDPGIKGGYHAEALWRVVEVALQCLEPYSTYRPCMVDIVRELEDALII 874          
BLAST of CX671832 vs. ExPASy Swiss-Prot
Match: PSKR2_ARATH (Phytosulfokine receptor 2 OS=Arabidopsis thaliana GN=PSKR2 PE=2 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 3.543e-26
Identity = 61/178 (34.27%), Postives = 102/178 (57.30%), Query Frame = 1
Query:    1 LDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNCVVGTYGYMAPEYASDWQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHAWKLWNEGMPSQLIDPCIQDSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSVILML 534
            L W  R  I  G ARG+ YLH+     +IHRD+K+SN+LLD+     ++DFGLAR     +T   T+ +VGT GY+ PEY+     + + DV+SFG++LLE+++G++        +  +L+   +++  E   ++LID  I+++ N   V+  + I   C+   P+ RP +  V+  L
Sbjct:  849 LIWDVRLKIAQGAARGLAYLHKVCEPNVIHRDVKSSNILLDEKFEAHLADFGLARLLRPYDTHVTTD-LVGTLGYIPPEYSQSLIATCRGDVYSFGVVLLELVTGRRPVEVCKGKSCRDLVSRVFQMKAEKREAELIDTTIRENVNERTVLEMLEIACKCIDHEPRRRPLIEEVVTWL 1025          
BLAST of CX671832 vs. ExPASy Swiss-Prot
Match: PTI1_SOLLC (Pto-interacting protein 1 OS=Solanum lycopersicum GN=PTI1 PE=1 SV=2)

HSP 1 Score: 118.627 bits (296), Expect = 4.627e-26
Identity = 67/187 (35.83%), Postives = 105/187 (56.15%), Query Frame = 1
Query:    1 LDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNCVVGTYGYMAPEYASDWQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHAWKLWNEGMPSQLIDPCIQDSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSVILMLGSETVLPQP 561
            L W++R  I  G A+G+ YLH+ ++  IIHRD+K+SN+LL  D   KI+DF L+          ++  V+GT+GY APEYA   Q S KSDV+SFG++LLE+++G+K         + +L+  A    +E    Q +D  +   +    + +   +  LCVQ     RP+M  V+  L  + +LP+P
Sbjct:  167 LSWAQRVKIAVGAAKGLEYLHEKAQPHIIHRDIKSSNILLFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLSSKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPRLSEDKVKQCVDARLNTDYPPKAIAKMAAVAALCVQYEADFRPNMSIVVKAL--QPLLPRP 351          
BLAST of CX671832 vs. ExPASy Swiss-Prot
Match: Y5977_ARATH (Probable leucine-rich repeat receptor-like protein kinase At5g49770 OS=Arabidopsis thaliana GN=At5g49770 PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 6.043e-26
Identity = 66/182 (36.26%), Postives = 106/182 (58.24%), Query Frame = 1
Query:    1 LDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNCVVGTYGYMAPEYASDWQFSVKSDVFSFGILLLEIISGKK--NRGFYHSDNKLNLIGHAWKLWNEGMPSQLIDPCIQDSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSVILMLGS 540
            LDW++R  I  G+ +G+ YLH+ +   IIHRD+K++N+LLD+ +  K++DFGL++  G  E    T  V GT GY+ PEY    Q + KSDV+ FG+++LE+++GK   +RG Y        +  +  L++  +   L    IQ+S NL    + + + L CV+    +RP+M  V+  L S
Sbjct:  727 LDWTRRLKIALGSGKGLAYLHELADPPIIHRDVKSNNILLDEHLTAKVADFGLSKLVGDPEKAHVTTQVKGTMGYLDPEYYMTNQLTEKSDVYGFGVVMLELLTGKSPIDRGSYVVKEVKKKMDKSRNLYD--LQELLDTTIIQNSGNLKGFEKYVDVALQCVEPEGVNRPTMSEVVQELES 906          
The following BLAST results are available for this feature:
BLAST of CX671832 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 367
Match NameE-valueIdentityDescription
CRI4_MAIZE1.218e-2633.62Putative receptor protein kinase CRINKLY4 OS=Zea m... [more]
APK1A_ARATH2.077e-2638.42Protein kinase APK1A, chloroplastic OS=Arabidopsis... [more]
Y5613_ARATH2.712e-2634.17Probable receptor-like protein kinase At5g61350 OS... [more]
Y2197_ARATH2.712e-2636.52Probable protein kinase At2g41970 OS=Arabidopsis t... [more]
WAKLB_ARATH2.712e-2634.83Wall-associated receptor kinase-like 2 OS=Arabidop... [more]
PSKR1_DAUCA2.712e-2635.39Phytosulfokine receptor 1 OS=Daucus carota GN=PSKR... [more]
NORK_MEDTR2.712e-2635.14Nodulation receptor kinase OS=Medicago truncatula ... [more]
PSKR2_ARATH3.543e-2634.27Phytosulfokine receptor 2 OS=Arabidopsis thaliana ... [more]
PTI1_SOLLC4.627e-2635.83Pto-interacting protein 1 OS=Solanum lycopersicum ... [more]
Y5977_ARATH6.043e-2636.26Probable leucine-rich repeat receptor-like protein... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_13D07_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-13D07-G13-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671832 ID=CX671832; Name=CX671832; organism=Citrus sinensis; type=EST; length=878bp
TTGGATTGGTCCAAGCGTTTCCACATTATTTGTGGGACTGCTAGGGGTGT
TATGTACCTTCATCAAGATTCTAGATTGAGGATTATACATCGAGATCTCA
AAGCAAGTAATGTGCTACTCGATCAAGATATGAACCCAAAAATTTCGGAT
TTTGGTTTGGCAAGAGCTTTTGGTGGAGACGAGACAGAAGGAAATACAAA
CTGCGTAGTTGGAACATACGGTTATATGGCACCGGAATATGCTAGTGATT
GGCAATTCTCAGTAAAATCCGATGTCTTCAGCTTTGGAATTTTATTGCTG
GAGATAATAAGTGGAAAGAAAAATAGAGGATTTTATCATTCCGACAACAA
GCTTAACCTTATAGGACATGCATGGAAGTTGTGGAACGAAGGCATGCCTT
CACAATTAATCGATCCATGTATTCAAGACTCATTCAATCTTGCTGAAGTG
ATACGATGCATCCACATCGGTTTGTTATGCGTGCAACAGCATCCAAAGGA
CAGGCCAAGCATGCCCTCAGTGATTTTGATGTTGGGCAGCGAGACTGTGT
TGCCTCAGCCAAAGCAACCCGGTTACTTGGCGCACAGGAAATCTACCGGA
CAAGATTATTCATCAAGCACGCCTGAATCATGTTCAACTAATACAATTAC
GATCTCTGAGTTGGAGGGTCGGTAGAGAATCTATTTGTGGTATCATGCCT
TGTTCTACATTGTCAAGTGCAAAAGCAGTAATATGTCAACCAAATGGAAA
GTTAAGATAAATGATTGGATAAAAAATGATGAGGATCATCCAGTGAATGC
ATGTTGTGGATCTAAAAGTTCAGAGGACATGCCAATTTTGCAGCTGACTA
CTTGGCTAAAATGCAGGCTCTATACCTC
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