CX671832

Overview
NameCX671832
Unique NameCX671832
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length878
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671832 vs. ExPASy Swiss-Prot
Match: Y1105_ARATH (Probable receptor-like protein kinase At1g11050 OS=Arabidopsis thaliana GN=At1g11050 PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 6.043e-26
Identity = 74/204 (36.27%), Postives = 112/204 (54.90%), Query Frame = 1
Query:    1 LDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNCVVGTYGYMAPEYASDWQFSVKSDVFSFGILLLEIISGKK--NRGFYHSDNKLNLIGHAWKLWNEGMPSQLIDPCI--QDSFNLAE----VIRCIHIGLLCVQQHPKDRPSMPSVILML-GSETVLPQPKQPGYLAH 585
            L W +R  II   A+G+ YLH   +  I HRD+K +N+LLD DM  +++DFGLA+     E+   T  V GT+GY+APEYA   Q + KSDV+SFG+++LEI+ G+K  +     S N   +   AW L   G   + ++  +  ++   L+     + R + +G+LC       RP++   + ML G   V P P +P  LAH
Sbjct:  395 LSWPQRKSIILDVAKGLAYLHYGVKPAIYHRDIKGTNILLDVDMRARVADFGLAKQSREGESHLTTR-VAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCGRKALDLSTSGSPNTFLITDWAWSLVKAGKTEEALEQSLLREEGSGLSNPKGIMERFLQVGILCAHVLVALRPTILDALKMLEGDIEVPPIPDRPVPLAH 597          
BLAST of CX671832 vs. ExPASy Swiss-Prot
Match: APK2A_ARATH (Protein kinase 2A, chloroplastic OS=Arabidopsis thaliana GN=APK2A PE=1 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 7.892e-26
Identity = 66/180 (36.67%), Postives = 109/180 (60.56%), Query Frame = 1
Query:    1 LDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFG-GDETEGNTNCVVGTYGYMAPEYASDWQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHAWK-LWNEGMPSQLIDPCIQDSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSVILML 534
            L W+ R  +  G A+G+ +LH+ ++ ++I+RD KA+N+LLD D N K+SDFGLA+A   GD T  +T  V+GT+GY APEY +  + + KSDV+SFG++LLE+ISG++     +  N+ +L+  A   L ++    +++D  +   +         ++ L C+    K RP M  V++ L
Sbjct:  189 LTWAIRMKVAVGAAKGLTFLHE-AKSQVIYRDFKAANILLDADFNAKLSDFGLAKAGPTGDNTHVSTK-VIGTHGYAAPEYVATGRLTAKSDVYSFGVVLLELISGRRAMDNSNGGNEYSLVDWATPYLGDKRKLFRIMDTKLGGQYPQKGAFTAANLALQCLNPDAKLRPKMSEVLVTL 366          
BLAST of CX671832 vs. ExPASy Swiss-Prot
Match: Y1755_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g07550 OS=Arabidopsis thaliana GN=At1g07550 PE=2 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 1.031e-25
Identity = 63/179 (35.20%), Postives = 104/179 (58.10%), Query Frame = 1
Query:    1 LDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF-GGDETEGNTNCVVGTYGYMAPEYASDWQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHAWKLWNEGMPSQLIDPCIQDSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSVILML 534
            L W  R  I   +A G+ YLH   + +I+HRD+K++N+LL ++   KI+DFGL+R+F  G+E +     V GT+GY+ PEY      S+KSDV+SFG++LLEIISG+       S    N++     +   G    ++DP +   ++ +   + + + + CV +  K+RP+M  V+ +L
Sbjct:  653 LSWPIRLKIALESAIGIEYLHTGCKPKIVHRDVKSTNILLSEEFEAKIADFGLSRSFLIGNEAQ--PTVVAGTFGYLDPEYHKTSLLSMKSDVYSFGVVLLEIISGQDVIDL--SRENCNIVEWTSFILENGDIESIVDPNLHQDYDTSSAWKVVELAMSCVNRTSKERPNMSQVVHVL 827          
BLAST of CX671832 vs. ExPASy Swiss-Prot
Match: Y1571_ARATH (Probable leucine-rich repeat receptor-like protein kinase At1g35710 OS=Arabidopsis thaliana GN=At1g35710 PE=2 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 1.031e-25
Identity = 65/174 (37.36%), Postives = 103/174 (59.20%), Query Frame = 1
Query:    1 LDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNCVVGTYGYMAPEYASDWQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHAWKLWNEGMPSQLIDPCIQDSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSV 522
            L W+KR +++ G A  + Y+H D    I+HRD+ + N+LLD D   KISDFG A+    D +  N + V GTYGY+APE+A   + + K DV+SFG+L+LE+I GK       S +  +  G A  L       ++++P  Q   N  ++++ + + LLC+Q +P+ RP+M S+
Sbjct:  950 LTWTKRINVVKGVAHALSYMHHDRITPIVHRDISSGNILLDNDYTAKISDFGTAKLLKTDSS--NWSAVAGTYGYVAPEFAYTMKVTEKCDVYSFGVLILELIIGKHPGDLVSSLS--SSPGEALSL-RSISDERVLEPRGQ---NREKLLKMVEMALLCLQANPESRPTMLSI 1115          
BLAST of CX671832 vs. ExPASy Swiss-Prot
Match: NORK_PEA (Nodulation receptor kinase OS=Pisum sativum GN=NORK PE=1 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 1.031e-25
Identity = 64/185 (34.59%), Postives = 101/185 (54.59%), Query Frame = 1
Query:    1 LDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNCVV-GTYGYMAPEYASDWQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHAWKLWNEGMPSQLIDPCIQDSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSVILMLGSETVL 552
            LDW  R  I  G ARG+ YLH      +IHRD+K+SN+LLD  M  K++DFG ++ +   E +   +  V GT GY+ PEY    Q S KSDVFSFG++LLEI+SG++         + +L+  A          +++DP I+  ++   + R + + L C++ +   RP M  ++  L    ++
Sbjct:  690 LDWPTRLSIALGAARGLAYLHTFPGRSVIHRDVKSSNILLDHSMCAKVADFGFSK-YAPQEGDSYVSLEVRGTAGYLDPEYYKTQQLSEKSDVFSFGVVLLEIVSGREPLNIKRPRVEWSLVEWAKPYIRASKVDEIVDPGIKGGYHAEALWRVVEVALQCLEPYSTYRPCMVDIVRELEDALII 873          
BLAST of CX671832 vs. ExPASy Swiss-Prot
Match: Y5707_ARATH (Probable receptor-like protein kinase At5g47070 OS=Arabidopsis thaliana GN=At5g47070 PE=1 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.346e-25
Identity = 67/181 (37.02%), Postives = 101/181 (55.80%), Query Frame = 1
Query:    1 LDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNCVVGTYGYMAPEYASDWQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHAWKLWNEGMP------SQLIDPCIQDSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSVI 525
            L W KR  I+ G A G+ YLH    L++I+RD K+SNVLLD    PK+SDFGLAR     +    T   VGT+GY APEY       +KSDV+SFG++L EII+G++         +  L+      W +  P      S ++DP +++++  A       +  LC++++ K+RP+M  V+
Sbjct:  190 LPWKKRLEIMLGAAEGLTYLHD---LKVIYRDFKSSNVLLDDQFCPKLSDFGLAREGPDGDNTHVTTARVGTHGYAAPEYVQTGHLRLKSDVYSFGVVLYEIITGRRTIERNKPVAERRLLD-----WVKEYPADSQRFSMIVDPRLRNNYPAAGARSLAKLADLCLKKNDKERPTMEIVV 362          
BLAST of CX671832 vs. ExPASy Swiss-Prot
Match: Y4265_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g26540 OS=Arabidopsis thaliana GN=At4g26540 PE=1 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.346e-25
Identity = 72/193 (37.31%), Postives = 105/193 (54.40%), Query Frame = 1
Query:    1 LDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEG-------NTNCVVGTYGYMAPEYASDWQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHAWK-----LWNEGMPSQLIDPCIQ---DSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSVILML 534
            +DW  R+ ++ G A  + YLH D    IIH D+KA NVLL     P ++DFGLAR   G    G       N   + G+YGYMAPE+AS  + + KSDV+S+G++LLE+++GK     +  D  L    H  K     L  +  PS+L+DP +    DS  + E+++ + +  LCV     +RP M  V+ ML
Sbjct:  852 VDWEARYDVVLGVAHALAYLHHDCLPTIIHGDVKAMNVLLGPHFEPYLADFGLARTISGYPNTGIDLAKPTNRPPMAGSYGYMAPEHASMQRITEKSDVYSYGVVLLEVLTGK-----HPLDPDLPGGAHLVKWVRDHLAEKKDPSRLLDPRLDGRTDSI-MHEMLQTLAVAFLCVSNKANERPLMKDVVAML 1038          
BLAST of CX671832 vs. ExPASy Swiss-Prot
Match: Y3545_ARATH (Probable receptor-like protein kinase At3g55450 OS=Arabidopsis thaliana GN=At3g55450 PE=1 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.346e-25
Identity = 64/179 (35.75%), Postives = 99/179 (55.31%), Query Frame = 1
Query:    1 LDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNCVVGTYGYMAPEYASDWQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHAWK-LWNEGMPSQLIDPCIQDSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSVILML 534
            L W  R  +    A+G+ +LH D  +++I+RD+KASN+LLD D N K+SDFGLAR     E    +  V+GT+GY APEY S    + +SDV+SFG++LLE++ G++         + NL+  A   L +      ++D  +   +     +R   I + C+   PK RP+M  V+  L
Sbjct:  167 LSWILRIKVALDAAKGLAFLHSDP-VKVIYRDIKASNILLDSDFNAKLSDFGLARDGPMGEQSYVSTRVMGTFGYAAPEYVSTGHLNARSDVYSFGVVLLELLCGRQALDHNRPAKEQNLVDWARPYLTSRRKVLLIVDTRLNSQYKPEGAVRLASIAVQCLSFEPKSRPTMDQVVRAL 344          
BLAST of CX671832 vs. ExPASy Swiss-Prot
Match: RPK1_ARATH (Probable LRR receptor-like serine/threonine-protein kinase RPK1 OS=Arabidopsis thaliana GN=RPK1 PE=1 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.346e-25
Identity = 59/180 (32.78%), Postives = 103/180 (57.22%), Query Frame = 1
Query:    1 LDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNCVVGTYGYMAPEYASDWQFSVKSDVFSFGILLLEIISGKK--NRGFYHSDNKLNLIGHAWKLWNEGMPSQLIDPCIQDSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSVILML 534
            ++W     I    AR + YLH+    +++HRD+K SN+LLD + N  +SDFGL++  G  ++   T  V GT+GY+APEYA   + S K+DV+S+GI+LLE+IS K+  +  F   +N  N++  A  + ++G   ++    + ++    +++  +H+ L C       RP+M   + +L
Sbjct:  354 IEWKVLHKIALDVARALSYLHEQCSPKVLHRDIKPSNILLDNNYNAYLSDFGLSKLLGTSQSHVTTG-VAGTFGYVAPEYAMTCRVSEKADVYSYGIVLLELISDKRALDPSFSSHENGFNIVSWAHMMLSQGKAKEVFTTGLWETGPPDDLVEVLHLALKCTVDSLSIRPTMKQAVRLL 532          
BLAST of CX671832 vs. ExPASy Swiss-Prot
Match: HSL1_ARATH (Receptor-like protein kinase HSL1 OS=Arabidopsis thaliana GN=HSL1 PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.758e-25
Identity = 64/179 (35.75%), Postives = 105/179 (58.66%), Query Frame = 1
Query:    1 LDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFG-GDETEGNTNCVVGTYGYMAPEYASDWQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHAWKLWNEGMPSQLIDPCIQDSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSVILML 534
            L W  RF II   A G+ YLH DS   I+HRD+K++N+L+D D   +++DFG+A+A     +   + + + G+ GY+APEYA   + + KSD++SFG+++LEI++ K  R       + +L+       ++     +IDP +   F   E+ + +++GLLC    P +RPSM  V+ ML
Sbjct:  784 LGWQTRFKIILDAAEGLSYLHHDSVPPIVHRDIKSNNILIDGDYGARVADFGVAKAVDLTGKAPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILEIVTRK--RPVDPELGEKDLVKWVCSTLDQKGIEHVIDPKLDSCFK-EEISKILNVGLLCTSPLPINRPSMRRVVKML 959          
The following BLAST results are available for this feature:
BLAST of CX671832 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 367
Match NameE-valueIdentityDescription
Y1105_ARATH6.043e-2636.27Probable receptor-like protein kinase At1g11050 OS... [more]
APK2A_ARATH7.892e-2636.67Protein kinase 2A, chloroplastic OS=Arabidopsis th... [more]
Y1755_ARATH1.031e-2535.20Probable LRR receptor-like serine/threonine-protei... [more]
Y1571_ARATH1.031e-2537.36Probable leucine-rich repeat receptor-like protein... [more]
NORK_PEA1.031e-2534.59Nodulation receptor kinase OS=Pisum sativum GN=NOR... [more]
Y5707_ARATH1.346e-2537.02Probable receptor-like protein kinase At5g47070 OS... [more]
Y4265_ARATH1.346e-2537.31Probable LRR receptor-like serine/threonine-protei... [more]
Y3545_ARATH1.346e-2535.75Probable receptor-like protein kinase At3g55450 OS... [more]
RPK1_ARATH1.346e-2532.78Probable LRR receptor-like serine/threonine-protei... [more]
HSL1_ARATH1.758e-2535.75Receptor-like protein kinase HSL1 OS=Arabidopsis t... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_13D07_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-13D07-G13-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671832 ID=CX671832; Name=CX671832; organism=Citrus sinensis; type=EST; length=878bp
TTGGATTGGTCCAAGCGTTTCCACATTATTTGTGGGACTGCTAGGGGTGT
TATGTACCTTCATCAAGATTCTAGATTGAGGATTATACATCGAGATCTCA
AAGCAAGTAATGTGCTACTCGATCAAGATATGAACCCAAAAATTTCGGAT
TTTGGTTTGGCAAGAGCTTTTGGTGGAGACGAGACAGAAGGAAATACAAA
CTGCGTAGTTGGAACATACGGTTATATGGCACCGGAATATGCTAGTGATT
GGCAATTCTCAGTAAAATCCGATGTCTTCAGCTTTGGAATTTTATTGCTG
GAGATAATAAGTGGAAAGAAAAATAGAGGATTTTATCATTCCGACAACAA
GCTTAACCTTATAGGACATGCATGGAAGTTGTGGAACGAAGGCATGCCTT
CACAATTAATCGATCCATGTATTCAAGACTCATTCAATCTTGCTGAAGTG
ATACGATGCATCCACATCGGTTTGTTATGCGTGCAACAGCATCCAAAGGA
CAGGCCAAGCATGCCCTCAGTGATTTTGATGTTGGGCAGCGAGACTGTGT
TGCCTCAGCCAAAGCAACCCGGTTACTTGGCGCACAGGAAATCTACCGGA
CAAGATTATTCATCAAGCACGCCTGAATCATGTTCAACTAATACAATTAC
GATCTCTGAGTTGGAGGGTCGGTAGAGAATCTATTTGTGGTATCATGCCT
TGTTCTACATTGTCAAGTGCAAAAGCAGTAATATGTCAACCAAATGGAAA
GTTAAGATAAATGATTGGATAAAAAATGATGAGGATCATCCAGTGAATGC
ATGTTGTGGATCTAAAAGTTCAGAGGACATGCCAATTTTGCAGCTGACTA
CTTGGCTAAAATGCAGGCTCTATACCTC
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