CX671832

Overview
NameCX671832
Unique NameCX671832
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length878
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671832 vs. ExPASy Swiss-Prot
Match: WAKLD_ARATH (Wall-associated receptor kinase-like 4 OS=Arabidopsis thaliana GN=WAKL4 PE=2 SV=2)

HSP 1 Score: 116.316 bits (290), Expect = 2.296e-25
Identity = 63/178 (35.39%), Postives = 95/178 (53.37%), Query Frame = 1
Query:    1 LDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNCVVGTYGYMAPEYASDWQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHAWKLWNEGMPSQLIDPCIQDSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSVILML 534
            + W  R HI    A  + YLH  +   I HRD+K +N+LLD+    K+SDFG +R+   D+T   T  V GT+GY+ PEY    +F+ KSDV+SFG++L+E+I+GK       S+       H      E     ++D  I+D  NL +V+    +   C+ +  K RP+M  V + L
Sbjct:  518 MTWEVRLHIAIEIAGALSYLHSAASFPIYHRDIKTTNILLDEKYQVKVSDFGTSRSVTIDQTHLTTQ-VAGTFGYVDPEYFQSSKFTDKSDVYSFGVVLVELITGKNPSSRVQSEENRGFAAHFVAAVKENRFLDIVDERIKDECNLDQVMAVAKLAKRCLNRKGKKRPNMREVSVEL 694          
BLAST of CX671832 vs. ExPASy Swiss-Prot
Match: Y2706_ARATH (Probable receptor-like protein kinase At2g47060 OS=Arabidopsis thaliana GN=At2g47060 PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 3.917e-25
Identity = 66/178 (37.08%), Postives = 98/178 (55.06%), Query Frame = 1
Query:    1 LDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNCVVGTYGYMAPEYASDWQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHAWKLWNEGMPSQLIDPCIQDSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSVILML 534
            L W +R  I  G ARG+ YLH+ +   IIHRD+K+SNVLL +D   KI+DF L+          ++  V+GT+GY APEYA   Q + KSDV+SFG++LLE+++G+K         + +L+  A    +E    Q +D  +   +    V +   +  LCVQ     RP+M  V+  L
Sbjct:  172 LSWYQRVKIAVGAARGLEYLHEKANPHIIHRDIKSSNVLLFEDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHRLPRGQQSLVTWATPKLSEDKVKQCVDARLGGDYPPKAVAKLAAVAALCVQYEADFRPNMSIVVKAL 349          
BLAST of CX671832 vs. ExPASy Swiss-Prot
Match: WAKLA_ARATH (Wall-associated receptor kinase-like 1 OS=Arabidopsis thaliana GN=WAKL1 PE=1 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 3.917e-25
Identity = 62/174 (35.63%), Postives = 95/174 (54.60%), Query Frame = 1
Query:    1 LDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNCVVGTYGYMAPEYASDWQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHAWKLWNEGMPSQLIDPCIQDSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSV 522
            + W  R  I    A  + Y+H  +   I HRD+K +N+LLD+    K+SDFG +R+   D+T   T  V GT+GYM PEY    Q++ KSDV+SFG++L+E+I+G+K      S+    L  H  +   E     +ID  I+D   L +V+    +   C+ +  K+RP+M  V
Sbjct:  523 MTWEVRLRIAIEIAGALTYMHSAASFPIFHRDIKTTNILLDEKYRAKVSDFGTSRSVTLDQTH-LTTLVAGTFGYMDPEYFLSSQYTHKSDVYSFGVVLVELITGEKPLSRVRSEEGRGLATHFLEAMKENRVIDIIDIRIKDESKLEQVMAVAKLARKCLNRKGKNRPNMKEV 695          
BLAST of CX671832 vs. ExPASy Swiss-Prot
Match: Y5900_ARATH (Putative receptor-like protein kinase At5g39000 OS=Arabidopsis thaliana GN=At5g39000 PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 5.116e-25
Identity = 63/179 (35.20%), Postives = 97/179 (54.19%), Query Frame = 1
Query:    1 LDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNCVV-GTYGYMAPEYASDWQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHAWKLWNEGMPSQLIDPCIQDSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSVILML 534
            L W +R  I  G ARG+ YLH  ++  IIHRD+K +N+LLD++   K+SDFGL+R      ++ + + VV GT+GY+ PEY      + KSDV+SFG++LLE++  +  R       + +LI      +  G   Q+ID  +        + +   I + CVQ    +RP M  V+  L
Sbjct:  615 LSWKRRLEICIGAARGLQYLHTGAKYTIIHRDIKTTNILLDENFVTKVSDFGLSRVGPTSASQTHVSTVVKGTFGYLDPEYYRRQVLTEKSDVYSFGVVLLEVLCCRPIRMQSVPPEQADLIRWVKSNYRRGTVDQIIDSDLSADITSTSLEKFCEIAVRCVQDRGMERPPMNDVVWAL 793          
BLAST of CX671832 vs. ExPASy Swiss-Prot
Match: WAKLJ_ARATH (Wall-associated receptor kinase-like 10 OS=Arabidopsis thaliana GN=WAKL10 PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 5.116e-25
Identity = 68/188 (36.17%), Postives = 94/188 (50.00%), Query Frame = 1
Query:    7 WSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNCVVGTYGYMAPEYASDWQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHAWKLWNEGMPSQLIDPCIQDSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSVILMLGSETVLPQPKQP 570
            W  R  I    A  + YLH  +   I HRD+K++N++LD+    K+SDFG +R    D T   T  V GT GYM PEY    QF+ KSDV+SFG++L E+I+G+K+  F  S     L  +      E   S +ID  I+D   L +V     I   C+    + RPSM  V + L       +  QP
Sbjct:  530 WEVRLRIAVDIAGALSYLHSAASSPIYHRDIKSTNIMLDEKHRAKVSDFGTSRTVTVDHTH-LTTVVSGTVGYMDPEYFQSSQFTDKSDVYSFGVVLAELITGEKSVSFLRSQEYRTLATYFTLAMKENRLSDIIDARIRDGCKLNQVTAAAKIARKCLNMKGRKRPSMRQVSMELEKIRSYSEDMQP 716          
BLAST of CX671832 vs. ExPASy Swiss-Prot
Match: CLV1_ARATH (Receptor protein kinase CLAVATA1 OS=Arabidopsis thaliana GN=CLV1 PE=1 SV=3)

HSP 1 Score: 115.161 bits (287), Expect = 5.116e-25
Identity = 63/183 (34.43%), Postives = 99/183 (54.10%), Query Frame = 1
Query:    1 LDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNCVVGTYGYMAPEYASDWQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKL-----NLIGHAWKLWNEGMPSQLIDPCIQDSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSVILML 534
            L W  R  +    A+G+ YLH D    I+HRD+K++N+LLD D    ++DFGLA+           + + G+YGY+APEYA   +   KSDV+SFG++LLE+I+GKK  G +     +     N      +  +  +   ++DP +   + L  VI    I ++CV++    RP+M  V+ ML
Sbjct:  786 LQWETRHRVAVEAAKGLCYLHHDCSPLILHRDVKSNNILLDSDFEAHVADFGLAKFLVDGAASECMSSIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIAGKKPVGEFGEGVDIVRWVRNTEEEITQPSDAAIVVAIVDPRL-TGYPLTSVIHVFKIAMMCVEEEAAARPTMREVVHML 967          
BLAST of CX671832 vs. ExPASy Swiss-Prot
Match: Y2242_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g24230 OS=Arabidopsis thaliana GN=At2g24230 PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 6.681e-25
Identity = 67/179 (37.43%), Postives = 99/179 (55.31%), Query Frame = 1
Query:    7 WSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNCVVGTYGYMAPEYASDWQF--SVKSDVFSFGILLLEIISGKKN-RGFYHSDNKLNLIGHAWKLWNEGMPSQLIDPCIQDSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSVILML 534
            W  R  I  GTAR + +LH      IIHRD+KAS+V LDQ+  P++SDFGLA+ FG    +     + G+ GY+ PE+        + KSDV+ FG++L E+++GKK     Y  +   NL+     L  +   S+ IDP IQ++ +  ++   + IG LC    P  RPSM  V+ +L
Sbjct:  669 WRFRHKIALGTARALAFLHHGCSPPIIHRDVKASSVYLDQNWEPRLSDFGLAKVFGNGLDD---EIIHGSPGYLPPEFLQPEHELPTPKSDVYCFGVVLFELMTGKKPIEDDYLDEKDTNLVSWVRSLVRKNQASKAIDPKIQETGSEEQMEEALKIGYLCTADLPSKRPSMQQVVGLL 844          
BLAST of CX671832 vs. ExPASy Swiss-Prot
Match: WAKLP_ARATH (Wall-associated receptor kinase-like 15 OS=Arabidopsis thaliana GN=WAKL15 PE=2 SV=2)

HSP 1 Score: 114.775 bits (286), Expect = 6.681e-25
Identity = 65/170 (38.24%), Postives = 100/170 (58.82%), Query Frame = 1
Query:   13 KRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNCVVGTYGYMAPEYASDWQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHAWKLWNEGMPSQLIDPCIQDSFNLAEVIRCIHIGL---LCVQQHPKDRPSM 513
            +R  I   TA+G+ YLH  S   I HRD+K+SN+LLD++++ K++DFGL+R  G  +    T C  GT GY+ PEY  ++Q + KSDV+SFG++L E+++ KK   F   +  +NL+    K   EG    +IDP I       E+     +G+   LCV++  + RP+M
Sbjct:  457 RRLMIAHQTAQGLDYLHSSSSPPIYHRDVKSSNILLDENLDVKVADFGLSR-LGVSDVSHVTTCAQGTLGYLDPEYYLNFQLTDKSDVYSFGVVLFELLTCKKAIDFNREEEDVNLVVFVRKALKEGRLMDVIDPVIGIGATEKEIESMKALGVLAELCVKETRQCRPTM 625          
BLAST of CX671832 vs. ExPASy Swiss-Prot
Match: APK1B_ARATH (Protein kinase APK1B, chloroplastic OS=Arabidopsis thaliana GN=APK1B PE=2 SV=2)

HSP 1 Score: 114.775 bits (286), Expect = 6.681e-25
Identity = 64/177 (36.16%), Postives = 106/177 (59.89%), Query Frame = 1
Query:    1 LDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR-AFGGDETEGNTNCVVGTYGYMAPEYASDWQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHAWKLW-NEGMPSQLIDPCIQDSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSVI 525
            L W+ R  +  G A+G+ +LH ++   +I+RD K SN+LLD + N K+SDFGLA+    GD++  +T  ++GTYGY APEY +    + KSDV+S+G++LLE++SG++         +  L+  A  L  N+    ++ID  +QD +++ E  +   + L C+    K RP+M  V+
Sbjct:  174 LSWTLRLKVALGAAKGLAFLH-NAETSVIYRDFKTSNILLDSEYNAKLSDFGLAKDGPTGDKSHVSTR-IMGTYGYAAPEYLATGHLTTKSDVYSYGVVLLEVLSGRRAVDKNRPPGEQKLVEWARPLLANKRKLFRVIDNRLQDQYSMEEACKVATLALRCLTFEIKLRPNMNEVV 348          
BLAST of CX671832 vs. ExPASy Swiss-Prot
Match: Y5389_ARATH (Probable receptor-like protein kinase At5g38990 OS=Arabidopsis thaliana GN=At5g38990 PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 1.140e-24
Identity = 63/179 (35.20%), Postives = 98/179 (54.75%), Query Frame = 1
Query:    1 LDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNCVV-GTYGYMAPEYASDWQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHAWKLWNEGMPSQLIDPCIQDSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSVILML 534
            L W +R  I  G ARG+ YLH  ++  IIHRD+K +N+LLD++   K+SDFGL+R      ++ + + VV GT+GY+ PEY      + KSDV+SFG++LLE++  +  R       + +LI      +N+    Q+ID  +        + +   I + CVQ    +RP M  V+  L
Sbjct:  622 LSWKRRLEICIGAARGLQYLHTGAKYTIIHRDIKTTNILLDENFVAKVSDFGLSRVGPTSASQTHVSTVVKGTFGYLDPEYYRRQILTEKSDVYSFGVVLLEVLCCRPIRMQSVPPEQADLIRWVKSNFNKRTVDQIIDSDLTADITSTSMEKFCEIAIRCVQDRGMERPPMNDVVWAL 800          
The following BLAST results are available for this feature:
BLAST of CX671832 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 367
Match NameE-valueIdentityDescription
WAKLD_ARATH2.296e-2535.39Wall-associated receptor kinase-like 4 OS=Arabidop... [more]
Y2706_ARATH3.917e-2537.08Probable receptor-like protein kinase At2g47060 OS... [more]
WAKLA_ARATH3.917e-2535.63Wall-associated receptor kinase-like 1 OS=Arabidop... [more]
Y5900_ARATH5.116e-2535.20Putative receptor-like protein kinase At5g39000 OS... [more]
WAKLJ_ARATH5.116e-2536.17Wall-associated receptor kinase-like 10 OS=Arabido... [more]
CLV1_ARATH5.116e-2534.43Receptor protein kinase CLAVATA1 OS=Arabidopsis th... [more]
Y2242_ARATH6.681e-2537.43Probable LRR receptor-like serine/threonine-protei... [more]
WAKLP_ARATH6.681e-2538.24Wall-associated receptor kinase-like 15 OS=Arabido... [more]
APK1B_ARATH6.681e-2536.16Protein kinase APK1B, chloroplastic OS=Arabidopsis... [more]
Y5389_ARATH1.140e-2435.20Probable receptor-like protein kinase At5g38990 OS... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_13D07_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-13D07-G13-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671832 ID=CX671832; Name=CX671832; organism=Citrus sinensis; type=EST; length=878bp
TTGGATTGGTCCAAGCGTTTCCACATTATTTGTGGGACTGCTAGGGGTGT
TATGTACCTTCATCAAGATTCTAGATTGAGGATTATACATCGAGATCTCA
AAGCAAGTAATGTGCTACTCGATCAAGATATGAACCCAAAAATTTCGGAT
TTTGGTTTGGCAAGAGCTTTTGGTGGAGACGAGACAGAAGGAAATACAAA
CTGCGTAGTTGGAACATACGGTTATATGGCACCGGAATATGCTAGTGATT
GGCAATTCTCAGTAAAATCCGATGTCTTCAGCTTTGGAATTTTATTGCTG
GAGATAATAAGTGGAAAGAAAAATAGAGGATTTTATCATTCCGACAACAA
GCTTAACCTTATAGGACATGCATGGAAGTTGTGGAACGAAGGCATGCCTT
CACAATTAATCGATCCATGTATTCAAGACTCATTCAATCTTGCTGAAGTG
ATACGATGCATCCACATCGGTTTGTTATGCGTGCAACAGCATCCAAAGGA
CAGGCCAAGCATGCCCTCAGTGATTTTGATGTTGGGCAGCGAGACTGTGT
TGCCTCAGCCAAAGCAACCCGGTTACTTGGCGCACAGGAAATCTACCGGA
CAAGATTATTCATCAAGCACGCCTGAATCATGTTCAACTAATACAATTAC
GATCTCTGAGTTGGAGGGTCGGTAGAGAATCTATTTGTGGTATCATGCCT
TGTTCTACATTGTCAAGTGCAAAAGCAGTAATATGTCAACCAAATGGAAA
GTTAAGATAAATGATTGGATAAAAAATGATGAGGATCATCCAGTGAATGC
ATGTTGTGGATCTAAAAGTTCAGAGGACATGCCAATTTTGCAGCTGACTA
CTTGGCTAAAATGCAGGCTCTATACCTC
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