CX671832

Overview
NameCX671832
Unique NameCX671832
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length878
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671832 vs. ExPASy Swiss-Prot
Match: Y5169_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g16900 OS=Arabidopsis thaliana GN=At5g16900 PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.260e-23
Identity = 59/175 (33.71%), Postives = 95/175 (54.29%), Query Frame = 1
Query:    1 LDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNCVVGTYGYMAPEYASDWQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHAWKLWNEGMPSQLIDPCIQDSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSVI 525
            L W  R  I   TA G+ YLH   +  ++HRD+K+ N+LLD+    K++DFGL+R+F   E    +  VVGT GY+ PEY   ++ + KSDV+SFGI+LLEII+ +       ++   ++      +      S ++DP +   ++   V + + + + CV   P  RP M  V+
Sbjct:  667 LKWENRLSIAVETALGLEYLHSGCKPLMVHRDVKSMNILLDEHFQAKLADFGLSRSFSVGEESHVSTGVVGTPGYLDPEYYRTYRLTEKSDVYSFGIVLLEIITNQP--VLEQANENRHIAERVRTMLTRSDISTIVDPNLIGEYDSGSVRKALKLAMSCVDPSPVARPDMSHVV 839          
BLAST of CX671832 vs. ExPASy Swiss-Prot
Match: Y1341_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g34110 OS=Arabidopsis thaliana GN=At1g34110 PE=2 SV=2)

HSP 1 Score: 110.538 bits (275), Expect = 1.260e-23
Identity = 64/191 (33.51%), Postives = 102/191 (53.40%), Query Frame = 1
Query:    1 LDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNT-NCVVGTYGYMAPEYASDWQFSVKSDVFSFGILLLEIISGKK------NRGFYHSD---NKLNLIGHAWKLWN---EGMPSQLIDPCIQDSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSVILML 534
            LDW  R+ I  G A+G+ YLH D    I+HRD+K +N+LLD      ++DFGLA+         N  + V G+YGY+APEY      + KSDV+S+G++LLEI+SG+         G +  +    K+     A  + +   +G+P Q++           E+++ + I + CV   P +RP+M  V+ +L
Sbjct:  869 LDWETRYKIAIGAAQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAILADFGLAKLMMNSPNYHNAMSRVAGSYGYIAPEYGYTMNITEKSDVYSYGVVLLEILSGRSAVEPQIGDGLHIVEWVKKKMGTFEPALSVLDVKLQGLPDQIVQ----------EMLQTLGIAMFCVNPSPVERPTMKEVVTLL 1049          
BLAST of CX671832 vs. ExPASy Swiss-Prot
Match: WAKLC_ARATH (Wall-associated receptor kinase-like 3 OS=Arabidopsis thaliana GN=WAKL3 PE=2 SV=2)

HSP 1 Score: 110.538 bits (275), Expect = 1.260e-23
Identity = 64/188 (34.04%), Postives = 99/188 (52.66%), Query Frame = 1
Query:    1 LDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNCVVGTYGYMAPEYASDWQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHAWKLWNEGMPSQLIDPCIQDSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSVILMLGSETVLPQPK 564
            + W  R  I    A  + Y+H  +   I HRD+K +N+LLD+    KISDFG +R+   D+T   T  V GT+GYM PEY    Q++ KSDV+SFG++L+E+I+G+K      S+  + L  +  +   E     +ID  I+D     +V+    +   C+ +    RP+M  V + L  E +   PK
Sbjct:  522 MTWEVRLRIAVEIAGALSYMHSAASFPIFHRDIKTTNILLDEKYRAKISDFGTSRSVATDQTH-LTTLVAGTFGYMDPEYFLSSQYTHKSDVYSFGVVLVELITGEKPMSRVRSEEGIGLATYFLEAMKENRAVDIIDIRIKDESK--QVMAVAKLARRCLNRKGNKRPNMREVSIKL--ERIRSSPK 704          
BLAST of CX671832 vs. ExPASy Swiss-Prot
Match: Y2899_ARATH (Probable leucine-rich repeat receptor-like protein kinase At2g28990 OS=Arabidopsis thaliana GN=At2g28990 PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.646e-23
Identity = 59/175 (33.71%), Postives = 95/175 (54.29%), Query Frame = 1
Query:    1 LDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNCVVGTYGYMAPEYASDWQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHAWKLWNEGMPSQLIDPCIQDSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSVI 525
            L W  R  I+   A G+ YLH      ++HRD+K +N+LLDQ +  K++DFGL+R+F     +  +  V GT GY+ PEY      + KSD++SFGI+LLEIIS +       S  K +++     +  +G    ++DP +   +++  V + I + + CV      RP+M  V+
Sbjct:  671 LSWESRLKIVLDAALGLEYLHTGCVPPMVHRDIKTTNILLDQHLQAKLADFGLSRSFPIGNEKNVSTVVAGTPGYLDPEYYQTNWLTEKSDIYSFGIVLLEIISNRPI--IQQSREKPHIVEWVSFMITKGDLRSIMDPNLHQDYDIGSVWKAIELAMSCVSLSSARRPNMSRVV 843          
BLAST of CX671832 vs. ExPASy Swiss-Prot
Match: WAK3_ARATH (Wall-associated receptor kinase 3 OS=Arabidopsis thaliana GN=WAK3 PE=2 SV=2)

HSP 1 Score: 110.153 bits (274), Expect = 1.646e-23
Identity = 60/178 (33.71%), Postives = 95/178 (53.37%), Query Frame = 1
Query:    1 LDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNCVVGTYGYMAPEYASDWQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHAWKLWNEGMPSQLIDPCIQDSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSVILML 534
            L W  R  I    A  + YLH  + + IIHRD+K +N+LLD+++  K++DFG ++    D+ E  T  V GT GY+ PEY +    + KSDV+SFG++L+E++SG+K   F       +L+ +      E    ++ID  + +  NL E+     I   C +   ++RP M  V   L
Sbjct:  509 LTWEHRLRIAIEVAGTLAYLHSSASIPIIHRDIKTANILLDENLTAKVADFGASKLIPMDK-EQLTTMVQGTLGYLDPEYYTTGLLNEKSDVYSFGVVLMELLSGQKALCFERPQASKHLVSYFVSATEENRLHEIIDDQVLNEDNLKEIQEAARIAAECTRLMGEERPRMKEVAAKL 685          
BLAST of CX671832 vs. ExPASy Swiss-Prot
Match: Y5597_ARATH (Probable receptor-like protein kinase At5g59700 OS=Arabidopsis thaliana GN=At5g59700 PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 2.149e-23
Identity = 57/175 (32.57%), Postives = 96/175 (54.86%), Query Frame = 1
Query:    1 LDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNCVVGTYGYMAPEYASDWQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHAWKLWNEGMPSQLIDPCIQDSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSVI 525
            L W +R  I  G+ARG+ YLH      +IHRD+K++N+LLD+++  K++DFGL++     +    +  V G++GY+ PEY    Q + KSDV+SFG+++ E++  +       +   +NL   A K   +G    +IDP ++       + +    G  C+  +  DRPSM  V+
Sbjct:  575 LSWKQRLEICIGSARGLHYLHTGDAKPVIHRDVKSANILLDENLMAKVADFGLSKTGPEIDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVMFEVLCARPVIDPTLTREMVNLAEWAMKWQKKGQLEHIIDPSLRGKIRPDSLRKFGETGEKCLADYGVDRPSMGDVL 749          
BLAST of CX671832 vs. ExPASy Swiss-Prot
Match: Y4245_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g20450 OS=Arabidopsis thaliana GN=At4g20450 PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.807e-23
Identity = 74/214 (34.58%), Postives = 116/214 (54.21%), Query Frame = 1
Query:    1 LDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFG-GDETEGNTNCVVGTYGYMAPEYASDWQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGH--AWKLWNEGMPSQLIDPCIQDSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSVILMLGSETVLPQPKQPG--YLAHRKSTGQDYSSSTPE 627
            L W  R  I   TA+G+ YLH   +  +IHRD+K+ N+LLD +   K+ DFGL+R+F  G ET  +TN V G+ GY+ PEY      + KSDVFSFG++LLEII+   ++       + + IG    +KL N G    ++DP +   ++ + + + + + + CV      RP+M  V   L  E +L +  + G  +    KS+ +  +S  PE
Sbjct:  685 LSWENRLRIAAETAQGLEYLHIGCKPPMIHRDIKSMNILLDNNFQAKLGDFGLSRSFPVGSETHVSTN-VAGSPGYLDPEYYRTNWLTEKSDVFSFGVVLLEIIT---SQPVIDQTREKSHIGEWVGFKLTN-GDIKNIVDPSMNGDYDSSSLWKALELAMSCVSPSSSGRPNMSQVANEL-QECLLTENSRKGGRHDVDSKSSLEQSTSFGPE 892          
BLAST of CX671832 vs. ExPASy Swiss-Prot
Match: SRF7_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 7 OS=Arabidopsis thaliana GN=SRF7 PE=1 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 3.666e-23
Identity = 62/179 (34.64%), Postives = 103/179 (57.54%), Query Frame = 1
Query:    1 LDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNCVVGTYGYMAPEYASDWQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHAW-KLWNEGMPSQLIDPCIQDSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSVILML 534
            L W+ R  I  GTAR + YLH+     I+H+++K++N+LLD ++NP +SD GLA          N N      GY APE +   Q+S+KSDV+SFG+++LE+++G+K      S ++ +L+  A  +L +     +++DP ++  + +  + R   +  LCVQ  P+ RP M  V+  L
Sbjct:  516 LIWNPRVKIALGTARALEYLHEVCSPSIVHKNIKSANILLDSELNPHLSDSGLASFLPTANELLNQN----DEGYSAPETSMSGQYSLKSDVYSFGVVMLELLTGRKPFDSTRSRSEQSLVRWATPQLHDIDALGKMVDPALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQAL 690          
BLAST of CX671832 vs. ExPASy Swiss-Prot
Match: APK2B_ARATH (Protein kinase 2B, chloroplastic OS=Arabidopsis thaliana GN=APK2B PE=1 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 3.666e-23
Identity = 64/180 (35.56%), Postives = 106/180 (58.89%), Query Frame = 1
Query:    1 LDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFG-GDETEGNTNCVVGTYGYMAPEYASDWQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHAWK-LWNEGMPSQLIDPCIQDSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSVILML 534
            L W+ R  +  G A+G+ +LH D++ ++I+RD KA+N+LLD + N K+SDFGLA+A   GD+T  +T  V+GT+GY APEY +  + + KSDV+SFG++LLE++SG++         + +L+  A   L ++    +++D  +   +          + L C+    K RP M  V+  L
Sbjct:  186 LTWAIRMKVAIGAAKGLTFLH-DAKSQVIYRDFKAANILLDAEFNSKLSDFGLAKAGPTGDKTHVSTQ-VMGTHGYAAPEYVATGRLTAKSDVYSFGVVLLELLSGRRAVDKSKVGMEQSLVDWATPYLGDKRKLFRIMDTRLGGQYPQKGAYTAASLALQCLNPDAKLRPKMSEVLAKL 363          
BLAST of CX671832 vs. ExPASy Swiss-Prot
Match: Y4885_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g08850 OS=Arabidopsis thaliana GN=At4g08850 PE=1 SV=3)

HSP 1 Score: 108.612 bits (270), Expect = 4.788e-23
Identity = 62/178 (34.83%), Postives = 98/178 (55.06%), Query Frame = 1
Query:    1 LDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNCVVGTYGYMAPEYASDWQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHAWKLWNEGMPS----QLIDPCIQDSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSV 522
            LDW KR +++ G A  + Y+H D    I+HRD+ + N+LL +D   KISDFG A+    D +  N + V GTYGY+APE A   + + K DV+SFG+L LE+I G+      H  + ++ +  +       + S    +L +P  +      EV+  + + LLC+   P+ RP+M S+
Sbjct:  874 LDWGKRINVVKGVAHALSYMHHDRSPAIVHRDISSGNILLGEDYEAKISDFGTAKLLKPDSS--NWSAVAGTYGYVAPELAYAMKVTEKCDVYSFGVLTLEVIKGE------HPGDLVSTLSSSPPDATLSLKSISDHRLPEPTPEIK---EEVLEILKVALLCLHSDPQARPTMLSI 1040          
The following BLAST results are available for this feature:
BLAST of CX671832 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 367
Match NameE-valueIdentityDescription
Y5169_ARATH1.260e-2333.71Probable LRR receptor-like serine/threonine-protei... [more]
Y1341_ARATH1.260e-2333.51Probable LRR receptor-like serine/threonine-protei... [more]
WAKLC_ARATH1.260e-2334.04Wall-associated receptor kinase-like 3 OS=Arabidop... [more]
Y2899_ARATH1.646e-2333.71Probable leucine-rich repeat receptor-like protein... [more]
WAK3_ARATH1.646e-2333.71Wall-associated receptor kinase 3 OS=Arabidopsis t... [more]
Y5597_ARATH2.149e-2332.57Probable receptor-like protein kinase At5g59700 OS... [more]
Y4245_ARATH2.807e-2334.58Probable LRR receptor-like serine/threonine-protei... [more]
SRF7_ARATH3.666e-2334.64Protein STRUBBELIG-RECEPTOR FAMILY 7 OS=Arabidopsi... [more]
APK2B_ARATH3.666e-2335.56Protein kinase 2B, chloroplastic OS=Arabidopsis th... [more]
Y4885_ARATH4.788e-2334.83Probable LRR receptor-like serine/threonine-protei... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_13D07_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-13D07-G13-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671832 ID=CX671832; Name=CX671832; organism=Citrus sinensis; type=EST; length=878bp
TTGGATTGGTCCAAGCGTTTCCACATTATTTGTGGGACTGCTAGGGGTGT
TATGTACCTTCATCAAGATTCTAGATTGAGGATTATACATCGAGATCTCA
AAGCAAGTAATGTGCTACTCGATCAAGATATGAACCCAAAAATTTCGGAT
TTTGGTTTGGCAAGAGCTTTTGGTGGAGACGAGACAGAAGGAAATACAAA
CTGCGTAGTTGGAACATACGGTTATATGGCACCGGAATATGCTAGTGATT
GGCAATTCTCAGTAAAATCCGATGTCTTCAGCTTTGGAATTTTATTGCTG
GAGATAATAAGTGGAAAGAAAAATAGAGGATTTTATCATTCCGACAACAA
GCTTAACCTTATAGGACATGCATGGAAGTTGTGGAACGAAGGCATGCCTT
CACAATTAATCGATCCATGTATTCAAGACTCATTCAATCTTGCTGAAGTG
ATACGATGCATCCACATCGGTTTGTTATGCGTGCAACAGCATCCAAAGGA
CAGGCCAAGCATGCCCTCAGTGATTTTGATGTTGGGCAGCGAGACTGTGT
TGCCTCAGCCAAAGCAACCCGGTTACTTGGCGCACAGGAAATCTACCGGA
CAAGATTATTCATCAAGCACGCCTGAATCATGTTCAACTAATACAATTAC
GATCTCTGAGTTGGAGGGTCGGTAGAGAATCTATTTGTGGTATCATGCCT
TGTTCTACATTGTCAAGTGCAAAAGCAGTAATATGTCAACCAAATGGAAA
GTTAAGATAAATGATTGGATAAAAAATGATGAGGATCATCCAGTGAATGC
ATGTTGTGGATCTAAAAGTTCAGAGGACATGCCAATTTTGCAGCTGACTA
CTTGGCTAAAATGCAGGCTCTATACCTC
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