CX671832

Overview
NameCX671832
Unique NameCX671832
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length878
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671832 vs. ExPASy Swiss-Prot
Match: Y9956_DICDI (Probable serine/threonine-protein kinase DDB_G0268876 OS=Dictyostelium discoideum GN=DDB_G0268876 PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.912e-12
Identity = 58/176 (32.95%), Postives = 81/176 (46.02%), Query Frame = 1
Query:   22 HIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNCVVGTYGYMAPEYASD-WQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHAWKLWNEGMPSQLIDPCIQDSFNLAEVIRCI----HIGLLCVQQHPKDRPSMPSVILML 534
            H+    A+G+ YLH    L IIHRDLK  N+L+DQD N +ISDFGL+R      T+      VGT  YMA E       +S ++DV+SF  +L E IS +                     + +    Q I   ++DSF       C+     +  +C   +P DRPS   +I  L
Sbjct:  857 HLALQVAKGMNYLHS---LGIIHRDLKPGNLLIDQDWNIRISDFGLSRVVDNRMTK-----TVGTPCYMAVEVLKGLTDYSQQADVYSFAFVLWECISRQIP-------------------YKDFAQIQWISMVLEDSFRPPIPDSCLPEFRDLITMCWTSNPDDRPSFQQIITYL 1005          
BLAST of CX671832 vs. ExPASy Swiss-Prot
Match: M3K9_MOUSE (Mitogen-activated protein kinase kinase kinase 9 OS=Mus musculus GN=Map3k9 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.912e-12
Identity = 44/101 (43.56%), Postives = 63/101 (62.38%), Query Frame = 1
Query:   40 ARGVMYLHQDSRLRIIHRDLKASNVLLDQ-----DMNPKI---SDFGLARAFGGDETEGNTNCVVGTYGYMAPEYASDWQFSVKSDVFSFGILLLEIISGK 318
            ARG+ YLH ++ + IIHRDLK+SN+L+ Q     D++ KI   +DFGLAR +             GTY +MAPE      FS  SDV+S+G+LL E+++G+
Sbjct:  243 ARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILEITDFGLAREWH----RTTKMSAAGTYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGE 339          
BLAST of CX671832 vs. ExPASy Swiss-Prot
Match: PKNA2_BIFLO (Probable serine/threonine-protein kinase pknA2 OS=Bifidobacterium longum GN=pknA2 PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.803e-12
Identity = 59/220 (26.82%), Postives = 104/220 (47.27%), Query Frame = 1
Query:   25 IICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNCVVGTYGYMAPEYASDWQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHAWKLWNEGMPS-----QLIDPCIQDSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSVILMLGSETVLPQPKQPGYLAHRKSTGQDYSSSTPESCSTNTITISELEG 669
            ++  T  G+   H   R  ++HRD+K  N+L++   + +I+DFGLA+A     T  +T  ++GT  Y+APE   + Q + + D++S GI+  E+++GK     + SDN + L+   +K  +E +PS     Q IDP +             H+    V   P D  +    +  L ++  L   +   Y  H +  G D++ +T  +   N    + L G
Sbjct:  120 VVAETLDGLASAH---RAGVVHRDIKPENILINDRGHVQITDFGLAKA-ASQATLSSTGMLLGTAAYLAPEMIENNQATAQGDLYSVGIMAWEMLTGKVP---FDSDNPVTLV---FKHVHEDVPSVATVCQGIDPSV--------AAFIAHLTARQVDARPTDGAAAAEELSQLAAKLPLEAWQ---YRLHAEPIGGDHTDATAAALVGNIAEQAPLTG 318          
BLAST of CX671832 vs. ExPASy Swiss-Prot
Match: RIPK3_RAT (Receptor-interacting serine/threonine-protein kinase 3 OS=Rattus norvegicus GN=Ripk3 PE=2 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 4.966e-12
Identity = 60/194 (30.93%), Postives = 93/194 (47.94%), Query Frame = 1
Query:   46 GVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNC--VVGTYGYMAPEYA-SDWQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHAWKLWNEGMPSQLIDPCIQDSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSVILMLGSETVLPQPKQPGYLAHRKSTGQDYSSS 618
            G+ YLH  +   ++HRDLK SNVLLD +++ K++DFGL+   GG ++   +      GT  Y+APE   +D + S  SDV+SFG+L+  +++G++        +K +LI  A        P   + P   DS     +     +   C    PKDRPS         +  +L Q K    ++  K     Y SS
Sbjct:  128 GMCYLHSLNP-SLLHRDLKPSNVLLDLELHAKLADFGLSTFQGGSQSGSGSGSRDSGGTLAYLAPELLDNDGKASKASDVYSFGVLVWTVLAGREAEVV----DKTSLIRGAVCNRQRRPPLTELPP---DSPETPGLEGLKELMTHCWSSEPKDRPSFQDCESKTNNVYILVQDKVDAAVSKVKHYLSQYRSS 313          
BLAST of CX671832 vs. ExPASy Swiss-Prot
Match: M2K1_ORYSJ (Mitogen-activated protein kinase kinase 1 OS=Oryza sativa subsp. japonica GN=MEK1 PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.966e-12
Identity = 36/91 (39.56%), Postives = 57/91 (62.64%), Query Frame = 1
Query:   46 GVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNCVVGTYGYMAPEYASDWQFSVKSDVFSFGILLLEIISGK 318
            G++YLH +    +IHRD+K SN+L+++    KI+DFG++       + G  +  VGTY YMAPE  S   +  KSD++S G+++LE   G+
Sbjct:  179 GLLYLHHERH--VIHRDIKPSNLLVNRKGEVKITDFGVSAVLAS--SMGQRDTFVGTYNYMAPERISGSSYDYKSDIWSLGLVILECAIGR 265          
BLAST of CX671832 vs. ExPASy Swiss-Prot
Match: DRKC_DICDI (Probable serine/threonine-protein kinase drkC OS=Dictyostelium discoideum GN=drkC PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.966e-12
Identity = 41/104 (39.42%), Postives = 61/104 (58.65%), Query Frame = 1
Query:    1 LDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNCVVGTYGYMAPEYASDWQFSVKSDVFSFGILLLEIIS 312
            LDW +   +    A+G+ YLH    + +IHRDLK+ N+L+D+    KISDFGL+  F     +      VGT  + APE   +  ++ K+DVFSF I+L EI++
Sbjct:  585 LDWPRMKSMALDIAKGMNYLHCCDPI-VIHRDLKSHNLLVDEHYRVKISDFGLSTRFKKHLDKKTAMTPVGTPCWTAPEVLRNDPYTEKADVFSFAIVLWEIVT 687          
BLAST of CX671832 vs. ExPASy Swiss-Prot
Match: 7TMK1_DICDI (Seven transmembrane domain-containing tyrosine-protein kinase 1 OS=Dictyostelium discoideum GN=7tmk1 PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.966e-12
Identity = 53/163 (32.52%), Postives = 87/163 (53.37%), Query Frame = 1
Query:   40 ARGVMYLHQDSRLRIIHRDLKASNVLLDQDMN-PKISDFGLARAFGGDETEGNTNCVVGTYGYMAPEYASDWQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHAWKLWNEGMPSQLIDPCIQDSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSVI 525
            ARG+ YLH      I+HRDL   N+LLD+ +   K++DFGL++  G + T       VG   Y APE      ++ K+DV+SFG+L+  II+G++           +L   A++ +   MP Q +DP  +   NL ++I       +C ++ P++RPS   ++
Sbjct:  475 ARGMFYLHDWKPNPILHRDLSTKNILLDESLTIAKVADFGLSKEQGFEMTS-----TVGHLCYQAPEVFIGELYTPKADVYSFGLLVWCIITGEQPNQNLQPLKMAHLA--AYENYRPPMP-QPMDPMWE---NLGKLIE------MCWKKSPEERPSFSFIL 620          
BLAST of CX671832 vs. ExPASy Swiss-Prot
Match: SHKC_DICDI (Dual specificity protein kinase shkC OS=Dictyostelium discoideum GN=shkC PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.486e-12
Identity = 53/173 (30.64%), Postives = 86/173 (49.71%), Query Frame = 1
Query:   16 RFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNCVVGTYGYMAPEYASDWQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHAWKLWNEGMPSQLIDPCIQDSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSVILML 534
            R  +    A G+ +LH+ + +  +HRD+K+SN+L+D++M  KI DFGL+      +   + +   GT  YMAPE     +F+  SDV+SFGI+L EI++ K+    +    +L     A  + +E  P  + + C+     L E          C  + P  RPS   +I  L
Sbjct:  122 RMRMARDAALGINWLHESNPV-FVHRDIKSSNLLVDENMRVKICDFGLSALKQKHKMLKDQSSAKGTPLYMAPEVMMFKEFNESSDVYSFGIVLWEILTRKEP---FSHHRELEKFREAVCVKHERPP--IPNDCLDSLRRLIE---------KCWDKEPISRPSFKEIISAL 279          
BLAST of CX671832 vs. ExPASy Swiss-Prot
Match: Y9853_DICDI (Probable serine/threonine-protein kinase DDB_G0271538 OS=Dictyostelium discoideum GN=DDB_G0271538 PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 8.471e-12
Identity = 53/179 (29.61%), Postives = 82/179 (45.81%), Query Frame = 1
Query:    1 LDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQD----MNPKISDFGLARAFGGDETEGNTNCVVGTYGYMAPEYASDWQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHAWKLWNEGMPSQLIDPCIQDSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSVI 525
            + W+ R  +    A    YLH     ++I RDLKA N+L+D+        K+ DFG AR F G +T   T C  G+   M+PE      ++   DV+S+G+LLLE+I G +          +N    A+ +  E       + C +   +LA+          C   +PKDRP+   V+
Sbjct:  128 ISWTLRMKLALDIASAFSYLHSK---KVIFRDLKAKNILVDEIGDGLYRAKVIDFGFARIFDGKDTNNLTIC--GSENTMSPEVIVGSSYNDSCDVYSYGVLLLELICGSRVVKTQLKRTPMN----AFDMNLEKAEHLAPESCPRAFMDLAK---------WCCSYNPKDRPTFKIVV 288          
BLAST of CX671832 vs. ExPASy Swiss-Prot
Match: PLK4_NEMVE (Serine/threonine-protein kinase PLK4 OS=Nematostella vectensis GN=v1g246408 PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 8.471e-12
Identity = 40/98 (40.82%), Postives = 57/98 (58.16%), Query Frame = 1
Query:   25 IICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNCVVGTYGYMAPEYASDWQFSVKSDVFSFGILLLEIISGK 318
            I+    +GV+YLH      IIHRDL   N+LL  DM+ KI+DFGLA      + +  T C  GT  Y++PE A+     ++SDV+S G +L  ++ GK
Sbjct:  117 IMLQVVKGVLYLHSHG---IIHRDLSLGNILLSSDMDAKIADFGLATRLSLPDEKHYTMC--GTPNYISPEIATRDPHGLESDVWSIGCMLFTLLVGK 209          
The following BLAST results are available for this feature:
BLAST of CX671832 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 367
Match NameE-valueIdentityDescription
Y9956_DICDI2.912e-1232.95Probable serine/threonine-protein kinase DDB_G0268... [more]
M3K9_MOUSE2.912e-1243.56Mitogen-activated protein kinase kinase kinase 9 O... [more]
PKNA2_BIFLO3.803e-1226.82Probable serine/threonine-protein kinase pknA2 OS=... [more]
RIPK3_RAT4.966e-1230.93Receptor-interacting serine/threonine-protein kina... [more]
M2K1_ORYSJ4.966e-1239.56Mitogen-activated protein kinase kinase 1 OS=Oryza... [more]
DRKC_DICDI4.966e-1239.42Probable serine/threonine-protein kinase drkC OS=D... [more]
7TMK1_DICDI4.966e-1232.52Seven transmembrane domain-containing tyrosine-pro... [more]
SHKC_DICDI6.486e-1230.64Dual specificity protein kinase shkC OS=Dictyostel... [more]
Y9853_DICDI8.471e-1229.61Probable serine/threonine-protein kinase DDB_G0271... [more]
PLK4_NEMVE8.471e-1240.82Serine/threonine-protein kinase PLK4 OS=Nematostel... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_13D07_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-13D07-G13-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671832 ID=CX671832; Name=CX671832; organism=Citrus sinensis; type=EST; length=878bp
TTGGATTGGTCCAAGCGTTTCCACATTATTTGTGGGACTGCTAGGGGTGT
TATGTACCTTCATCAAGATTCTAGATTGAGGATTATACATCGAGATCTCA
AAGCAAGTAATGTGCTACTCGATCAAGATATGAACCCAAAAATTTCGGAT
TTTGGTTTGGCAAGAGCTTTTGGTGGAGACGAGACAGAAGGAAATACAAA
CTGCGTAGTTGGAACATACGGTTATATGGCACCGGAATATGCTAGTGATT
GGCAATTCTCAGTAAAATCCGATGTCTTCAGCTTTGGAATTTTATTGCTG
GAGATAATAAGTGGAAAGAAAAATAGAGGATTTTATCATTCCGACAACAA
GCTTAACCTTATAGGACATGCATGGAAGTTGTGGAACGAAGGCATGCCTT
CACAATTAATCGATCCATGTATTCAAGACTCATTCAATCTTGCTGAAGTG
ATACGATGCATCCACATCGGTTTGTTATGCGTGCAACAGCATCCAAAGGA
CAGGCCAAGCATGCCCTCAGTGATTTTGATGTTGGGCAGCGAGACTGTGT
TGCCTCAGCCAAAGCAACCCGGTTACTTGGCGCACAGGAAATCTACCGGA
CAAGATTATTCATCAAGCACGCCTGAATCATGTTCAACTAATACAATTAC
GATCTCTGAGTTGGAGGGTCGGTAGAGAATCTATTTGTGGTATCATGCCT
TGTTCTACATTGTCAAGTGCAAAAGCAGTAATATGTCAACCAAATGGAAA
GTTAAGATAAATGATTGGATAAAAAATGATGAGGATCATCCAGTGAATGC
ATGTTGTGGATCTAAAAGTTCAGAGGACATGCCAATTTTGCAGCTGACTA
CTTGGCTAAAATGCAGGCTCTATACCTC
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