CX671832

Overview
NameCX671832
Unique NameCX671832
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length878
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5100 contig Csv1_Contig5100:1..878. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX671832 vs. ExPASy Swiss-Prot
Match: LRKA2_ARATH (Lectin-domain containing receptor kinase A4.2 OS=Arabidopsis thaliana GN=LECRKA4.2 PE=2 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 2.291e-33
Identity = 91/238 (38.24%), Postives = 132/238 (55.46%), Query Frame = 1
Query:    1 LDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNCVVGTYGYMAPEYASDWQFSVKSDVFSFGILLLEIISGKK---NRGFYHSDNKLNLIGHAWKLWNEGMPSQLIDPCIQDSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSVILMLGSETVLPQ-PKQPGYL-AHRKSTGQDY---------SSSTPESCSTNTITISELEGR 672
            L W+ RF I  G A G++YLH++    +IHRD+K SNVL++ DMNP++ DFGLAR +    ++ NT  VVGT GYMAPE A + + S  SDVF+FG+LLLEI+SG++   +  F+ +D  + L  HA      G     +DP +   ++  E    + +GLLC  Q P  RPSM +V+  L  +  +P+     GY  + R   G ++         SSS P    T   + S + GR
Sbjct:  459 LSWNARFKIAKGIASGLLYLHEEWEKVVIHRDIKPSNVLIEDDMNPRLGDFGLARLYERG-SQSNTTVVVGTIGYMAPELARNGKSSSASDVFAFGVLLLEIVSGRRPTDSGTFFLADWVMEL--HA-----RGEILHAVDPRLGFGYDGVEARLALVVGLLCCHQRPTSRPSMRTVLRYLNGDDDVPEIDNDWGYSDSSRSDLGSNFEGYVSSDRASSSVPSFSVTRVSSSSVISGR 688          
BLAST of CX671832 vs. ExPASy Swiss-Prot
Match: EXS_ARATH (Leucine-rich repeat receptor protein kinase EXS OS=Arabidopsis thaliana GN=EXS PE=1 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 6.666e-33
Identity = 76/180 (42.22%), Postives = 109/180 (60.56%), Query Frame = 1
Query:    1 LDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNCVVGTYGYMAPEYASDWQFSVKSDVFSFGILLLEIISGKKNRG--FYHSDNKLNLIGHAWKLWNEGMPSQLIDPCIQDSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSVILML 534
            LDWSKR  I  G ARG+ +LH      IIHRD+KASN+LLD D  PK++DFGLAR     E+  +T  + GT+GY+ PEY    + + K DV+SFG++LLE+++GK+  G  F  S+   NL+G A +  N+G    +IDP +         +R + I +LC+ + P  RP+M  V+  L
Sbjct: 1012 LDWSKRLKIAVGAARGLAFLHHGFIPHIIHRDIKASNILLDGDFEPKVADFGLARLISACESHVST-VIAGTFGYIPPEYGQSARATTKGDVYSFGVILLELVTGKEPTGPDFKESEGG-NLVGWAIQKINQGKAVDVIDPLLVSVALKNSQLRLLQIAMLCLAETPAKRPNMLDVLKAL 1189          
BLAST of CX671832 vs. ExPASy Swiss-Prot
Match: RLCK7_ARATH (Probable serine/threonine-protein kinase RLCKVII OS=Arabidopsis thaliana GN=At1g07870 PE=2 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 8.706e-33
Identity = 75/180 (41.67%), Postives = 112/180 (62.22%), Query Frame = 1
Query:    1 LDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF-GGDETEGNTNCVVGTYGYMAPEYASDWQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHAWKLWNEGMP-SQLIDPCIQDSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSVILML 534
            LDW+ R  I  G ARG+ YLH      +I+RDLK SN+LL +D  PK+SDFGLA+    GD+T  +T  V+GTYGY AP+YA   Q + KSD++SFG++LLE+I+G+K      +    NL+G A  L+ +     +++DP +Q  + +  + + + I  +CVQ+ P  RP +  V+L L
Sbjct:  199 LDWNTRMKIAAGAARGLEYLHDRMTPPVIYRDLKCSNILLGEDYQPKLSDFGLAKVGPSGDKTHVSTR-VMGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELITGRKAIDNTKTRKDQNLVGWARPLFKDRRNFPKMVDPLLQGQYPVRGLYQALAISAMCVQEQPTMRPVVSDVVLAL 377          
BLAST of CX671832 vs. ExPASy Swiss-Prot
Match: FEI2_ARATH (LRR receptor-like serine/threonine-protein kinase FEI 2 OS=Arabidopsis thaliana GN=FEI2 PE=1 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 5.643e-32
Identity = 74/188 (39.36%), Postives = 110/188 (58.51%), Query Frame = 1
Query:    1 LDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNCVVGTYGYMAPEYASDWQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHAWKLWNEGMPSQLID-PCIQDSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSVILMLGSETVLPQP 561
            LDW  R +II G A+G+ YLH D   RIIHRD+K+SN+LLD ++  ++SDFGLA+    DE    T  V GT+GY+APEY    + + K+DV+SFG+L+LE++SGK        +   N++G    L +E    +++D  C  +      +   + I   CV   P +RP+M  V+ +L SE + P P
Sbjct:  396 LDWDSRVNIIIGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLL-EDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKLPTDASFIEKGFNIVGWLNFLISENRAKEIVDLSC--EGVERESLDALLSIATKCVSSSPDERPTMHRVVQLLESEVMTPCP 580          
BLAST of CX671832 vs. ExPASy Swiss-Prot
Match: LRKA1_ARATH (Lectin-domain containing receptor kinase A4.1 OS=Arabidopsis thaliana GN=LECRKA4.1 PE=2 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 9.625e-32
Identity = 84/218 (38.53%), Postives = 118/218 (54.13%), Query Frame = 1
Query:    1 LDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNCVVGTYGYMAPEYASDWQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHAWKLWNEGMPSQLIDPCIQDSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSVILMLGSETVLPQ-PKQPGYLAHRKSTGQDYSSSTPESCSTNTIT 651
            L W+ RF I  G A G++YLH++    +IHRD+K SNVL+D  MNP++ DFGLAR +    T   T  +VGT GYMAPE + +   S  SDVF+FG+LLLEI+ G+K            L+    +L   G     IDP +   ++  E    + +GLLC  Q P  RPSM  V+  L  E  +P+   + GY    KS+  ++ S      S+ +IT
Sbjct:  463 LSWNARFQIAKGIASGLLYLHEEWEKIVIHRDVKPSNVLIDSKMNPRLGDFGLARLYERG-TLSETTALVGTIGYMAPELSRNGNPSSASDVFAFGVLLLEIVCGRKPT----DSGTFFLVDWVMELHANGEILSAIDPRLGSGYDGGEARLALAVGLLCCHQKPASRPSMRIVLRYLNGEENVPEIDDEWGY---SKSSRSEFGSKLVGYVSSTSIT 672          
BLAST of CX671832 vs. ExPASy Swiss-Prot
Match: Y1154_ARATH (Probable serine/threonine-protein kinase At1g01540 OS=Arabidopsis thaliana GN=At1g01540 PE=1 SV=2)

HSP 1 Score: 136.732 bits (343), Expect = 1.642e-31
Identity = 69/184 (37.50%), Postives = 109/184 (59.24%), Query Frame = 1
Query:    1 LDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNCVVGTYGYMAPEYASDWQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHAWKLWNEGMPSQLIDPCIQDSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSVILMLGSETVL 552
            L W  R +II G A+G+ YLH+    +++HRD+K+SN+LLD+  N K+SDFGLA+  G + +   T  V+GT+GY+APEYA     + KSD++SFGIL++EII+G+    +     + NL+     +       +++DP I +  +   + R + + L CV      RP M  +I ML +E +L
Sbjct:  249 LTWDIRMNIILGMAKGLAYLHEGLEPKVVHRDIKSSNILLDRQWNAKVSDFGLAKLLGSESSYVTTR-VMGTFGYVAPEYACTGMLNEKSDIYSFGILIMEIITGRNPVDYSRPQGETNLVDWLKSMVGNRRSEEVVDPKIPEPPSSKALKRVLLVALRCVDPDANKRPKMGHIIHMLEAEDLL 431          
BLAST of CX671832 vs. ExPASy Swiss-Prot
Match: LRKA3_ARATH (Lectin-domain containing receptor kinase A4.3 OS=Arabidopsis thaliana GN=LECRKA4.3 PE=2 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 4.777e-31
Identity = 75/186 (40.32%), Postives = 105/186 (56.45%), Query Frame = 1
Query:    1 LDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNCVVGTYGYMAPEYASDWQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHAWKLWNEGMPSQLIDPCIQDSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSVILMLGSETVLPQ 558
            L W+ RF I  G A G++YLH++    +IHRD+K SNVL+D DMNP++ DFGLAR +    ++  T  VVGT GYMAPE A +   S  SDVF+FG+LLLEI+SG+K            +     +L   G     IDP +   ++  E    + +GLLC    P+ RP M  V+  L  +  +P+
Sbjct:  460 LSWNARFQIAKGIASGLLYLHEEWEQIVIHRDVKPSNVLIDSDMNPRLGDFGLARLYERG-SQSCTTVVVGTIGYMAPELARNGNSSSASDVFAFGVLLLEIVSGRKPT----DSGTFFIADWVMELQASGEILSAIDPRLGSGYDEGEARLALAVGLLCCHHKPESRPLMRMVLRYLNRDEDVPE 640          
BLAST of CX671832 vs. ExPASy Swiss-Prot
Match: SERK2_ARATH (Somatic embryogenesis receptor kinase 2 OS=Arabidopsis thaliana GN=SERK2 PE=1 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 8.148e-31
Identity = 75/180 (41.67%), Postives = 108/180 (60.00%), Query Frame = 1
Query:    1 LDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNCVVGTYGYMAPEYASDWQFSVKSDVFSFGILLLEIISGKK--NRGFYHSDNKLNLIGHAWKLWNEGMPSQLIDPCIQDSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSVILML 534
            L WS R  I  G+ARG+ YLH     +IIHRD+KA+N+LLD++    + DFGLAR     +T   T  V GT G++APEY S  + S K+DVF +GI+LLE+I+G++  +     +D+ + L+     L  E     L+DP +Q ++  AEV + I + LLC Q  P +RP M  V+ ML
Sbjct:  401 LAWSIRQQIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLARLMDYKDTH-VTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEMLVDPDLQSNYTEAEVEQLIQVALLCTQSSPMERPKMSEVVRML 579          
BLAST of CX671832 vs. ExPASy Swiss-Prot
Match: Y2296_ARATH (Probable receptor-like protein kinase At2g42960 OS=Arabidopsis thaliana GN=At2g42960 PE=2 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 1.390e-30
Identity = 68/181 (37.57%), Postives = 108/181 (59.67%), Query Frame = 1
Query:    1 LDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNCVVGTYGYMAPEYASDWQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHAWKLWNEGMPSQLIDPCIQDSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSVILMLGSE 543
            L W  R  II GTA+ + YLH+    +++HRD+KASN+L+D + N K+SDFGLA+     E+   T  V+GT+GY+APEYA+    + KSD++SFG+LLLE I+G+    +    N++NL+     +       +++DP ++   + + + R + + L CV    + RP M  V  ML S+
Sbjct:  278 LTWEARMKIITGTAQALAYLHEAIEPKVVHRDIKASNILIDDEFNAKLSDFGLAKLLDSGESHITTR-VMGTFGYVAPEYANTGLLNEKSDIYSFGVLLLEAITGRDPVDYGRPANEVNLVEWLKMMVGTRRAEEVVDPRLEPRPSKSALKRALLVSLRCVDPEAEKRPRMSQVARMLESD 457          
BLAST of CX671832 vs. ExPASy Swiss-Prot
Match: HSL2_ARATH (LRR receptor-like serine/threonine-protein kinase HSL2 OS=Arabidopsis thaliana GN=HSL2 PE=2 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.815e-30
Identity = 73/202 (36.14%), Postives = 119/202 (58.91%), Query Frame = 1
Query:    1 LDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEG----NTNCVVGTYGYMAPEYASDWQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHAWK-------------------LWNEGMPSQLIDPCIQ-DSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSVILML 534
            LDW+ RF I  G A+G+ YLH DS   I+HRD+K++N+LLD +M P+++DFGLA+    ++ +G    + +CV G+YGY+APEY    + + KSDV+SFG++LLE+I+GK+       +NK +++  A +                   L N    S+L+DP ++  +    E+ + + + LLC    P +RP+M  V+ +L
Sbjct:  786 LDWTTRFSIAVGAAQGLSYLHHDSVPPIVHRDVKSNNILLDHEMKPRVADFGLAKPLKREDNDGVSDVSMSCVAGSYGYIAPEYGYTSKVNEKSDVYSFGVVLLELITGKRPNDSSFGENK-DIVKFAMEAALCYPSPSAEDGAMNQDSLGNYRDLSKLVDPKMKLSTREYEEIEKVLDVALLCTSSFPINRPTMRKVVELL 986          
The following BLAST results are available for this feature:
BLAST of CX671832 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 367
Match NameE-valueIdentityDescription
LRKA2_ARATH2.291e-3338.24Lectin-domain containing receptor kinase A4.2 OS=A... [more]
EXS_ARATH6.666e-3342.22Leucine-rich repeat receptor protein kinase EXS OS... [more]
RLCK7_ARATH8.706e-3341.67Probable serine/threonine-protein kinase RLCKVII O... [more]
FEI2_ARATH5.643e-3239.36LRR receptor-like serine/threonine-protein kinase ... [more]
LRKA1_ARATH9.625e-3238.53Lectin-domain containing receptor kinase A4.1 OS=A... [more]
Y1154_ARATH1.642e-3137.50Probable serine/threonine-protein kinase At1g01540... [more]
LRKA3_ARATH4.777e-3140.32Lectin-domain containing receptor kinase A4.3 OS=A... [more]
SERK2_ARATH8.148e-3141.67Somatic embryogenesis receptor kinase 2 OS=Arabido... [more]
Y2296_ARATH1.390e-3037.57Probable receptor-like protein kinase At2g42960 OS... [more]
HSL2_ARATH1.815e-3036.14LRR receptor-like serine/threonine-protein kinase ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_13D07_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-13D07-G13-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671832 ID=CX671832; Name=CX671832; organism=Citrus sinensis; type=EST; length=878bp
TTGGATTGGTCCAAGCGTTTCCACATTATTTGTGGGACTGCTAGGGGTGT
TATGTACCTTCATCAAGATTCTAGATTGAGGATTATACATCGAGATCTCA
AAGCAAGTAATGTGCTACTCGATCAAGATATGAACCCAAAAATTTCGGAT
TTTGGTTTGGCAAGAGCTTTTGGTGGAGACGAGACAGAAGGAAATACAAA
CTGCGTAGTTGGAACATACGGTTATATGGCACCGGAATATGCTAGTGATT
GGCAATTCTCAGTAAAATCCGATGTCTTCAGCTTTGGAATTTTATTGCTG
GAGATAATAAGTGGAAAGAAAAATAGAGGATTTTATCATTCCGACAACAA
GCTTAACCTTATAGGACATGCATGGAAGTTGTGGAACGAAGGCATGCCTT
CACAATTAATCGATCCATGTATTCAAGACTCATTCAATCTTGCTGAAGTG
ATACGATGCATCCACATCGGTTTGTTATGCGTGCAACAGCATCCAAAGGA
CAGGCCAAGCATGCCCTCAGTGATTTTGATGTTGGGCAGCGAGACTGTGT
TGCCTCAGCCAAAGCAACCCGGTTACTTGGCGCACAGGAAATCTACCGGA
CAAGATTATTCATCAAGCACGCCTGAATCATGTTCAACTAATACAATTAC
GATCTCTGAGTTGGAGGGTCGGTAGAGAATCTATTTGTGGTATCATGCCT
TGTTCTACATTGTCAAGTGCAAAAGCAGTAATATGTCAACCAAATGGAAA
GTTAAGATAAATGATTGGATAAAAAATGATGAGGATCATCCAGTGAATGC
ATGTTGTGGATCTAAAAGTTCAGAGGACATGCCAATTTTGCAGCTGACTA
CTTGGCTAAAATGCAGGCTCTATACCTC
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