CX671832

Overview
NameCX671832
Unique NameCX671832
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length878
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5100 contig Csv1_Contig5100:1..878. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX671832 vs. ExPASy Swiss-Prot
Match: MEE39_ARATH (Probable LRR receptor-like serine/threonine-protein kinase MEE39 OS=Arabidopsis thaliana GN=MEE39 PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 4.185e-27
Identity = 68/180 (37.78%), Postives = 106/180 (58.89%), Query Frame = 1
Query:    1 LDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF--GGDETEGNTNCVVGTYGYMAPEYASDWQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHAWKLWNEGMPSQLIDPCIQDSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSVILML 534
            L+W  R  I    A G+ YLH   +  ++HRD+K++N+LLD++   KI+DFGL+R+F  GGD+++ +T  V GT GY+ PEY    + S KSDV+SFGILLLEII+ +  R    +    N+      +  +G  SQ++DP +  +++   V R + + + C       RP+M  VI+ L
Sbjct:  660 LNWGTRLQIAIEAALGLEYLHTGCKPAMVHRDVKSTNILLDEEFKAKIADFGLSRSFQVGGDQSQVST-VVAGTLGYLDPEYYLTSELSEKSDVYSFGILLLEIITNQ--RVIDQTRENPNIAEWVTFVIKKGDTSQIVDPKLHGNYDTHSVWRALEVAMSCANPSSVKRPNMSQVIINL 836          
BLAST of CX671832 vs. ExPASy Swiss-Prot
Match: Y2393_ARATH (Probable receptor-like protein kinase At2g39360 OS=Arabidopsis thaliana GN=At2g39360 PE=1 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 5.466e-27
Identity = 64/175 (36.57%), Postives = 101/175 (57.71%), Query Frame = 1
Query:    1 LDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNCVVGTYGYMAPEYASDWQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHAWKLWNEGMPSQLIDPCIQDSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSVI 525
            L W +R  I  G ARG+ YLH  S   IIHRD+K++N+LLD +   K++DFGL++     +    +  V G++GY+ PEY +  Q + KSDV+SFG+++LE++ G+          K+NLI  A KL  +G    +IDP +     L EV +   +   C+ Q+  +RP+M  ++
Sbjct:  581 LSWRQRLEICVGAARGLHYLHTGSTRAIIHRDVKSANILLDDNFMAKVADFGLSKTGPDLDQTHVSTAVKGSFGYLDPEYLTRQQLTEKSDVYSFGVVMLEVVCGRPVIDPSLPREKVNLIEWAMKLVKKGKLEDIIDPFLVGKVKLEEVKKYCEVTEKCLSQNGIERPAMGDLL 755          
BLAST of CX671832 vs. ExPASy Swiss-Prot
Match: RLK5_ARATH (Receptor-like protein kinase 5 OS=Arabidopsis thaliana GN=RLK5 PE=1 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 5.466e-27
Identity = 67/180 (37.22%), Postives = 103/180 (57.22%), Query Frame = 1
Query:    1 LDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARA--FGGDETEGNTNCVVGTYGYMAPEYASDWQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHAWKLWNEGMPSQLIDPCIQDSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSVILML 534
            L W +R  I    A G+ YLH D    I+HRD+K+SN+LLD D   K++DFG+A+     G +T    + + G+ GY+APEY    + + KSD++SFG++LLE+++GK+       D   ++        ++     +IDP +   F   E+ + IHIGLLC    P +RPSM  V++ML
Sbjct:  788 LGWPERLRIALDAAEGLSYLHHDCVPPIVHRDVKSSNILLDSDYGAKVADFGIAKVGQMSGSKTPEAMSGIAGSCGYIAPEYVYTLRVNEKSDIYSFGVVLLELVTGKQPTDSELGDK--DMAKWVCTALDKCGLEPVIDPKLDLKFK-EEISKVIHIGLLCTSPLPLNRPSMRKVVIML 964          
BLAST of CX671832 vs. ExPASy Swiss-Prot
Match: BRL2_ARATH (Serine/threonine-protein kinase BRI1-like 2 OS=Arabidopsis thaliana GN=BRL1 PE=1 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 5.466e-27
Identity = 70/193 (36.27%), Postives = 106/193 (54.92%), Query Frame = 1
Query:    1 LDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNCVVGTYGYMAPEYASDWQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHAWKLWNEGMPSQLIDPCI-----QDSFN----------LAEVIRCIHIGLLCVQQHPKDRPSMPSVILML 534
            L W +R  I  G A+G+ +LH +    IIHRD+K+SNVLLDQDM  ++SDFG+AR     +T  + + + GT GY+ PEY   ++ + K DV+S G+++LEI+SGK+           NL+G +     EG   ++ID  +      +S N          + E++R + I L CV   P  RP+M  V+  L
Sbjct:  935 LGWEERKKIAKGAAKGLCFLHHNCIPHIIHRDMKSSNVLLDQDMEARVSDFGMARLISALDTHLSVSTLAGTPGYVPPEYYQSFRCTAKGDVYSIGVVMLEILSGKRPTD-KEEFGDTNLVGWSKMKAREGKHMEVIDEDLLKEGSSESLNEKEGFEGGVIVKEMLRYLEIALRCVDDFPSKRPNMLQVVASL 1126          
BLAST of CX671832 vs. ExPASy Swiss-Prot
Match: Y3804_ARATH (Probably inactive leucine-rich repeat receptor-like protein kinase At3g28040 OS=Arabidopsis thaliana GN=At3g28040 PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 7.138e-27
Identity = 66/180 (36.67%), Postives = 105/180 (58.33%), Query Frame = 1
Query:    1 LDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF-GGDETEGNTNCVVGTYGYMAPEY-ASDWQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHAWKLWNEGMPSQLIDPCIQDSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSVILML 534
            L W  R+ II GTA+G+ YLH   R   IH +LK +N+LLD+  NPKISDFGL+R     D    N N      GY+APE    + + + K DV+ FG+L+LE+++G++    Y  D+ + L  H   +  +G   + IDP +++ ++  EV+  + + L+C  Q P +RP+M  ++ +L
Sbjct:  823 LSWDVRYKIILGTAKGLAYLHHTFRPTTIHFNLKPTNILLDEKNNPKISDFGLSRLLTTQDGNTMNNNRFQNALGYVAPELECQNLRVNEKCDVYGFGVLILELVTGRRPVE-YGEDSFVILSDHVRVMLEQGNVLECIDPVMEEQYSEDEVLPVLKLALVCTSQIPSNRPTMAEIVQIL 1001          
BLAST of CX671832 vs. ExPASy Swiss-Prot
Match: PEPR1_ARATH (Leucine-rich repeat receptor-like protein kinase PEPR1 OS=Arabidopsis thaliana GN=PEPR1 PE=1 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 7.138e-27
Identity = 69/187 (36.90%), Postives = 108/187 (57.75%), Query Frame = 1
Query:    1 LDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNCVVGTYGYMAPEYASDWQFSVKSDVFSFGILLLEIISGKK--NRGFYHSDNKLNLIGHAWKLWN---EGMPSQLIDPC----IQDSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSVILML 534
            LDWS R+++  G A G+ YLH D    I+HRD+K  N+L+D D+ P I DFGLAR    D++  +T  V GT GY+APE A       +SDV+S+G++LLE+++ K+  ++ F  S + ++ +  A    N   E M + ++DP     + DS    +V++   + L C QQ P  RP+M   + +L
Sbjct:  923 LDWSARYNVALGVAHGLAYLHYDCHPPIVHRDIKPENILMDSDLEPHIGDFGLARLL--DDSTVSTATVTGTTGYIAPENAFKTVRGRESDVYSYGVVLLELVTRKRAVDKSFPESTDIVSWVRSALSSSNNNVEDMVTTIVDPILVDELLDSSLREQVMQVTELALSCTQQDPAMRPTMRDAVKLL 1107          
BLAST of CX671832 vs. ExPASy Swiss-Prot
Match: NAK_ARATH (Probable serine/threonine-protein kinase NAK OS=Arabidopsis thaliana GN=NAK PE=2 SV=2)

HSP 1 Score: 121.324 bits (303), Expect = 7.138e-27
Identity = 69/177 (38.98%), Postives = 109/177 (61.58%), Query Frame = 1
Query:    1 LDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFG-GDETEGNTNCVVGTYGYMAPEYASDWQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHAWK-LWNEGMPSQLIDPCIQDSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSVI 525
            L W+ R  +  G ARG+ +LH +++ ++I+RD KASN+LLD + N K+SDFGLAR    GD +  +T  V+GT GY APEY +    SVKSDV+SFG++LLE++SG++         + NL+  A   L N+    +++DP +Q  ++L   ++   + L C+    K RP+M  ++
Sbjct:  173 LSWNTRVRMALGAARGLAFLH-NAQPQVIYRDFKASNILLDSNYNAKLSDFGLARDGPMGDNSHVSTR-VMGTQGYAAPEYLATGHLSVKSDVYSFGVVLLELLSGRRAIDKNQPVGEHNLVDWARPYLTNKRRLLRVMDPRLQGQYSLTRALKIAVLALDCISIDAKSRPTMNEIV 347          
BLAST of CX671832 vs. ExPASy Swiss-Prot
Match: WAKLR_ARATH (Wall-associated receptor kinase-like 21 OS=Arabidopsis thaliana GN=WAKL21 PE=1 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 9.323e-27
Identity = 73/213 (34.27%), Postives = 104/213 (48.83%), Query Frame = 1
Query:    1 LDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGN--TNCVVGTYGYMAPEYASDWQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHAWKLWNEGMPSQLIDPCIQDSFN---LAEVIRCIHIGLLCVQQHPKDRPSMPSVILMLGSETVLPQPKQPGYLAHRKSTGQDYSSSTP 624
            L W  R  I C TA  + +LH      I HRD+K+SN+LLD + N KISDFGL+R     + E +  +    GT GY+ P+Y  D+Q S KSDV+SFG++L+EIISG K   F    +++NL   A      G    +IDPC+    N    A +     +   C+  H   RP+M  +   L    ++    + G   +R         S P
Sbjct:  406 LSWQLRLAIACQTANAIAHLHSSVNPPIYHRDIKSSNILLDHEFNSKISDFGLSRLGMSTDFEASHISTAPQGTPGYLDPQYHQDFQLSDKSDVYSFGVVLVEIISGFKVIDFTRPYSEVNLASLAVDRIGRGRVVDIIDPCLNKEINPKMFASIHNLAELAFRCLSFHRNMRPTMVEITEDLHRIKLMHYGTESGKFKNRSEIDMKRQQSFP 618          
BLAST of CX671832 vs. ExPASy Swiss-Prot
Match: SRF8_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 8 OS=Arabidopsis thaliana GN=SRF8 PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 1.218e-26
Identity = 68/210 (32.38%), Postives = 120/210 (57.14%), Query Frame = 1
Query:    1 LDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNCVVGTYGYMAPEYASDWQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHAW-KLWNEGMPSQLIDPCIQDSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSVILMLGSETVLPQPKQPGYLAHRKSTGQDYSSSTPE 627
            L W+ R  +  GTA+ + YLH+     I+HR+ K++N+LLD+++NP +SD GLA      E + +T  VVG++GY APE+A    ++VKSDV++FG+++LE+++G+K      +  + +L+  A  +L +    S+++DP +   +    + R   I  LC+Q  P+ RP M  V+     + ++   ++   +  R S    +S  TPE
Sbjct:  492 LTWNARVKVALGTAKALEYLHEVCLPSIVHRNFKSANILLDEELNPHLSDSGLAALTPNTERQVSTQ-VVGSFGYSAPEFALSGIYTVKSDVYTFGVVMLELLTGRKPLDSSRTRAEQSLVRWATPQLHDIDALSKMVDPSLNGMYPAKSLSRFADIIALCIQPEPEFRPPMSEVV-----QQLVRLVQRASVVKRRSSDDTGFSYRTPE 695          
BLAST of CX671832 vs. ExPASy Swiss-Prot
Match: RCH2_ARATH (Receptor-like protein kinase 2 OS=Arabidopsis thaliana GN=RCH2 PE=1 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 1.218e-26
Identity = 66/186 (35.48%), Postives = 104/186 (55.91%), Query Frame = 1
Query:    1 LDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNCVVGTYGYMAPEYASDWQFSVKSDVFSFGILLLEIISGKK------NRGFYHSDNKLNLIGHAWKLWNEGMPSQLIDPCIQD--SFNLAEVIRCIHIGLLCVQQHPKDRPSMPSVILML 534
            LDW  R+ I+ G A+G+ YLH D    I+HRD+KA+N+L+  D  P I+DFGLA+     +    +N V G+YGY+APEY    + + KSDV+S+G+++LE+++GK+        G +  D         W   N G   +++D  ++        E+++ +   LLCV   P +RP+M  V  ML
Sbjct:  888 LDWDLRYRILLGAAQGLAYLHHDCLPPIVHRDIKANNILIGLDFEPYIADFGLAKLVDEGDIGRCSNTVAGSYGYIAPEYGYSMKITEKSDVYSYGVVVLEVLTGKQPIDPTVPEGIHLVD---------WVRQNRG-SLEVLDSTLRSRTEAEADEMMQVLGTALLCVNSSPDERPTMKDVAAML 1063          
The following BLAST results are available for this feature:
BLAST of CX671832 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 367
Match NameE-valueIdentityDescription
MEE39_ARATH4.185e-2737.78Probable LRR receptor-like serine/threonine-protei... [more]
Y2393_ARATH5.466e-2736.57Probable receptor-like protein kinase At2g39360 OS... [more]
RLK5_ARATH5.466e-2737.22Receptor-like protein kinase 5 OS=Arabidopsis thal... [more]
BRL2_ARATH5.466e-2736.27Serine/threonine-protein kinase BRI1-like 2 OS=Ara... [more]
Y3804_ARATH7.138e-2736.67Probably inactive leucine-rich repeat receptor-lik... [more]
PEPR1_ARATH7.138e-2736.90Leucine-rich repeat receptor-like protein kinase P... [more]
NAK_ARATH7.138e-2738.98Probable serine/threonine-protein kinase NAK OS=Ar... [more]
WAKLR_ARATH9.323e-2734.27Wall-associated receptor kinase-like 21 OS=Arabido... [more]
SRF8_ARATH1.218e-2632.38Protein STRUBBELIG-RECEPTOR FAMILY 8 OS=Arabidopsi... [more]
RCH2_ARATH1.218e-2635.48Receptor-like protein kinase 2 OS=Arabidopsis thal... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_13D07_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-13D07-G13-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671832 ID=CX671832; Name=CX671832; organism=Citrus sinensis; type=EST; length=878bp
TTGGATTGGTCCAAGCGTTTCCACATTATTTGTGGGACTGCTAGGGGTGT
TATGTACCTTCATCAAGATTCTAGATTGAGGATTATACATCGAGATCTCA
AAGCAAGTAATGTGCTACTCGATCAAGATATGAACCCAAAAATTTCGGAT
TTTGGTTTGGCAAGAGCTTTTGGTGGAGACGAGACAGAAGGAAATACAAA
CTGCGTAGTTGGAACATACGGTTATATGGCACCGGAATATGCTAGTGATT
GGCAATTCTCAGTAAAATCCGATGTCTTCAGCTTTGGAATTTTATTGCTG
GAGATAATAAGTGGAAAGAAAAATAGAGGATTTTATCATTCCGACAACAA
GCTTAACCTTATAGGACATGCATGGAAGTTGTGGAACGAAGGCATGCCTT
CACAATTAATCGATCCATGTATTCAAGACTCATTCAATCTTGCTGAAGTG
ATACGATGCATCCACATCGGTTTGTTATGCGTGCAACAGCATCCAAAGGA
CAGGCCAAGCATGCCCTCAGTGATTTTGATGTTGGGCAGCGAGACTGTGT
TGCCTCAGCCAAAGCAACCCGGTTACTTGGCGCACAGGAAATCTACCGGA
CAAGATTATTCATCAAGCACGCCTGAATCATGTTCAACTAATACAATTAC
GATCTCTGAGTTGGAGGGTCGGTAGAGAATCTATTTGTGGTATCATGCCT
TGTTCTACATTGTCAAGTGCAAAAGCAGTAATATGTCAACCAAATGGAAA
GTTAAGATAAATGATTGGATAAAAAATGATGAGGATCATCCAGTGAATGC
ATGTTGTGGATCTAAAAGTTCAGAGGACATGCCAATTTTGCAGCTGACTA
CTTGGCTAAAATGCAGGCTCTATACCTC
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