CX671830
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX671830 vs. ExPASy Swiss-Prot
Match: MDH_SHELP (Malate dehydrogenase OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=mdh PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 4.763e-30 Identity = 72/144 (50.00%), Postives = 94/144 (65.28%), Query Frame = -1 Query: 268 VDVPVVEGHAGVTILPLLSQVKPSCSLTPTEIDYLTDRIQNGGTEVVEAKAGAGSATLSMAYAAAKFADACLRGLRGDASVIECAYVASTVTELPFFASKVRLGRAGIEEIYSLGPLNEYERAGLEKAKKELAGSIQKGVSFVR 699 V V V+ GH+GVTILPLLSQ++ S + E+ LT RIQN GTEVVEAKAG GSATLSM AA +F + +RGL+G+A+V+ECAYV FFA V LG+ GIE++ + G ++E+E + L I GV FV+ Sbjct: 169 VKVNVIGGHSGVTILPLLSQIE-GVSFSDEEVAALTTRIQNAGTEVVEAKAGGGSATLSMGQAACRFGLSLVRGLQGEANVVECAYVDGGSEHADFFAQPVLLGKNGIEQVLAYGEVSEFEANARDAMLDTLKADITLGVDFVK 311
BLAST of CX671830 vs. ExPASy Swiss-Prot
Match: MDH_SHEDO (Malate dehydrogenase OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) GN=mdh PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 4.763e-30 Identity = 71/144 (49.31%), Postives = 94/144 (65.28%), Query Frame = -1 Query: 268 VDVPVVEGHAGVTILPLLSQVKPSCSLTPTEIDYLTDRIQNGGTEVVEAKAGAGSATLSMAYAAAKFADACLRGLRGDASVIECAYVASTVTELPFFASKVRLGRAGIEEIYSLGPLNEYERAGLEKAKKELAGSIQKGVSFVR 699 V++ V+ GH+GVTILPLLSQVK S T E+ LT RIQN GTEVVEAKAG GSATLSM AA +F + +RGL+G+A+V+ECAYV FFA + LG+ G+E++ G ++ +E + L I+ GV FV+ Sbjct: 169 VNINVIGGHSGVTILPLLSQVK-GVSFTDEEVAALTKRIQNAGTEVVEAKAGGGSATLSMGQAACRFGLSLVRGLQGEANVVECAYVDGGSEHAQFFAQPILLGKNGVEKVMPYGEVSAFEANARDAMLDTLNADIKLGVEFVK 311
BLAST of CX671830 vs. ExPASy Swiss-Prot
Match: MDH_PROMH (Malate dehydrogenase OS=Proteus mirabilis (strain HI4320) GN=mdh PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 6.221e-30 Identity = 73/144 (50.69%), Postives = 89/144 (61.81%), Query Frame = -1 Query: 265 DVPVVEGHAGVTILPLLSQVKPSCSLTPTEIDYLTDRIQNGGTEVVEAKAGAGSATLSMAYAAAKFADACLRGLRGDASVIECAYVASTVTELPFFASKVRLGRAGIEEIYSLGPLNEYERAGLEKAKKELAGSIQKGVSFVRK 696 +VPV+ GH+GVTILPLLSQV S T E+ LT RIQN GTEVVEAKAG GSATLSM AAA+F + +R L G+ VIEC Y FFA VRLG+ G+EE +G L+++E+ L L I G F+ K Sbjct: 170 NVPVIGGHSGVTILPLLSQVA-GVSFTDEEVAALTKRIQNAGTEVVEAKAGGGSATLSMGQAAARFGLSLIRALNGEKDVIECTYTEGDGEHARFFAQPVRLGKNGVEEYLPIGQLSDFEKQSLNGMLDVLKKDIILGEEFINK 312
BLAST of CX671830 vs. ExPASy Swiss-Prot
Match: MDHM_RAT (Malate dehydrogenase, mitochondrial OS=Rattus norvegicus GN=Mdh2 PE=1 SV=2) HSP 1 Score: 130.954 bits (328), Expect = 6.221e-30 Identity = 67/144 (46.53%), Postives = 94/144 (65.28%), Query Frame = -1 Query: 268 VDVPVVEGHAGVTILPLLSQVKPSCSLTPTEIDYLTDRIQNGGTEVVEAKAGAGSATLSMAYAAAKFADACLRGLRGDASVIECAYVASTVTELPFFASKVRLGRAGIEEIYSLGPLNEYERAGLEKAKKELAGSIQKGVSFVR 699 V+VPV+ GHAG TI+PL+SQ P ++ LT RIQ GTEVV+AKAGAGSATLSMAYA A+F + + + G VIEC++V S TE +F++ + LG+ G+E+ +G + +E + +A EL SI+KG FV+ Sbjct: 192 VNVPVIGGHAGKTIIPLISQCTPKVDFPQDQLATLTGRIQEAGTEVVKAKAGAGSATLSMAYAGARFVFSLVDAMNGKEGVIECSFVQSKETECTYFSTPLLLGKKGLEKNLGIGKITPFEEKMIAEAIPELKASIKKGEDFVK 335
BLAST of CX671830 vs. ExPASy Swiss-Prot
Match: MDHM_MACFA (Malate dehydrogenase, mitochondrial OS=Macaca fascicularis GN=MDH2 PE=2 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 6.221e-30 Identity = 67/144 (46.53%), Postives = 93/144 (64.58%), Query Frame = -1 Query: 268 VDVPVVEGHAGVTILPLLSQVKPSCSLTPTEIDYLTDRIQNGGTEVVEAKAGAGSATLSMAYAAAKFADACLRGLRGDASVIECAYVASTVTELPFFASKVRLGRAGIEEIYSLGPLNEYERAGLEKAKKELAGSIQKGVSFVR 699 V+VPV+ GHAG TI+PL+SQ P ++ LT RIQ GTEVV+AKAGAGSATLSMAYA A+F + + + G V+EC++V S TE +F++ + LG+ GIE+ +G + +E + A EL SI+KG FV+ Sbjct: 192 VNVPVIGGHAGKTIIPLISQCTPKVDFPQDQLTALTGRIQEAGTEVVKAKAGAGSATLSMAYAGARFVFSLVDAMNGKEGVVECSFVKSQETECTYFSTPLLLGKKGIEKNLGIGQIPSFEEKMISDAIPELKASIKKGEDFVK 335
BLAST of CX671830 vs. ExPASy Swiss-Prot
Match: MDH_SHESW (Malate dehydrogenase OS=Shewanella sp. (strain W3-18-1) GN=mdh PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 8.124e-30 Identity = 71/144 (49.31%), Postives = 94/144 (65.28%), Query Frame = -1 Query: 268 VDVPVVEGHAGVTILPLLSQVKPSCSLTPTEIDYLTDRIQNGGTEVVEAKAGAGSATLSMAYAAAKFADACLRGLRGDASVIECAYVASTVTELPFFASKVRLGRAGIEEIYSLGPLNEYERAGLEKAKKELAGSIQKGVSFVR 699 V + V+ GH+GVTILPLLSQV+ + + E+ LT RIQN GTEVVEAKAG GSATLSM AA +F + +RGL+G+A+V+ECAYV FFA V LG+ GIE++ G ++ +E + L G I+ GV FV+ Sbjct: 169 VKINVIGGHSGVTILPLLSQVE-GVTFSDEEVASLTKRIQNAGTEVVEAKAGGGSATLSMGQAACRFGMSLVRGLQGEANVVECAYVDGGSEHAEFFAQPVLLGKNGIEKVLPYGEVSAFEANARDSMLDTLKGDIKLGVDFVK 311
BLAST of CX671830 vs. ExPASy Swiss-Prot
Match: MDH_SHESR (Malate dehydrogenase OS=Shewanella sp. (strain MR-7) GN=mdh PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 8.124e-30 Identity = 71/144 (49.31%), Postives = 94/144 (65.28%), Query Frame = -1 Query: 268 VDVPVVEGHAGVTILPLLSQVKPSCSLTPTEIDYLTDRIQNGGTEVVEAKAGAGSATLSMAYAAAKFADACLRGLRGDASVIECAYVASTVTELPFFASKVRLGRAGIEEIYSLGPLNEYERAGLEKAKKELAGSIQKGVSFVR 699 V V V+ GH+GVTILPLLSQV+ + + E+ LT RIQN GTEVVEAKAG GSATLSM AA +F + +RGL+G+A+++ECAYV FFA V LG+ GIE++ G ++ +E + L G I+ GV FV+ Sbjct: 169 VKVNVIGGHSGVTILPLLSQVE-GVTFSDEEVASLTKRIQNAGTEVVEAKAGGGSATLSMGQAACRFGMSLVRGLQGEANIVECAYVDGGSEHAEFFAQPVLLGKNGIEKVLPYGEVSAFEANARDSMLDTLKGDIKLGVDFVK 311
BLAST of CX671830 vs. ExPASy Swiss-Prot
Match: MDH_SHESM (Malate dehydrogenase OS=Shewanella sp. (strain MR-4) GN=mdh PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 8.124e-30 Identity = 71/144 (49.31%), Postives = 94/144 (65.28%), Query Frame = -1 Query: 268 VDVPVVEGHAGVTILPLLSQVKPSCSLTPTEIDYLTDRIQNGGTEVVEAKAGAGSATLSMAYAAAKFADACLRGLRGDASVIECAYVASTVTELPFFASKVRLGRAGIEEIYSLGPLNEYERAGLEKAKKELAGSIQKGVSFVR 699 V V V+ GH+GVTILPLLSQV+ + + E+ LT RIQN GTEVVEAKAG GSATLSM AA +F + +RGL+G+A+++ECAYV FFA V LG+ GIE++ G ++ +E + L G I+ GV FV+ Sbjct: 169 VKVNVIGGHSGVTILPLLSQVE-GVTFSDEEVASLTKRIQNAGTEVVEAKAGGGSATLSMGQAACRFGMSLVRGLQGEANIVECAYVDGGSEHAEFFAQPVLLGKNGIEKVLPYGEVSAFEANARDSMLDTLKGDIKLGVDFVK 311
BLAST of CX671830 vs. ExPASy Swiss-Prot
Match: MDH_SHESA (Malate dehydrogenase OS=Shewanella sp. (strain ANA-3) GN=mdh PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 8.124e-30 Identity = 71/144 (49.31%), Postives = 94/144 (65.28%), Query Frame = -1 Query: 268 VDVPVVEGHAGVTILPLLSQVKPSCSLTPTEIDYLTDRIQNGGTEVVEAKAGAGSATLSMAYAAAKFADACLRGLRGDASVIECAYVASTVTELPFFASKVRLGRAGIEEIYSLGPLNEYERAGLEKAKKELAGSIQKGVSFVR 699 V V V+ GH+GVTILPLLSQV+ + + E+ LT RIQN GTEVVEAKAG GSATLSM AA +F + +RGL+G+A+++ECAYV FFA V LG+ GIE++ G ++ +E + L G I+ GV FV+ Sbjct: 169 VKVNVIGGHSGVTILPLLSQVE-GVTFSDEEVASLTKRIQNAGTEVVEAKAGGGSATLSMGQAACRFGMSLVRGLQGEANIVECAYVDGGSEHAEFFAQPVLLGKNGIEKVLPYGEVSAFEANARDSMLDTLKGDIKLGVDFVK 311
BLAST of CX671830 vs. ExPASy Swiss-Prot
Match: MDH_SHEPC (Malate dehydrogenase OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) GN=mdh PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 8.124e-30 Identity = 71/144 (49.31%), Postives = 94/144 (65.28%), Query Frame = -1 Query: 268 VDVPVVEGHAGVTILPLLSQVKPSCSLTPTEIDYLTDRIQNGGTEVVEAKAGAGSATLSMAYAAAKFADACLRGLRGDASVIECAYVASTVTELPFFASKVRLGRAGIEEIYSLGPLNEYERAGLEKAKKELAGSIQKGVSFVR 699 V + V+ GH+GVTILPLLSQV+ + + E+ LT RIQN GTEVVEAKAG GSATLSM AA +F + +RGL+G+A+V+ECAYV FFA V LG+ GIE++ G ++ +E + L G I+ GV FV+ Sbjct: 169 VKINVIGGHSGVTILPLLSQVE-GVTFSDEEVASLTKRIQNAGTEVVEAKAGGGSATLSMGQAACRFGMSLVRGLQGEANVVECAYVDGGSEHAEFFAQPVLLGKNGIEKVLPYGEVSAFEANARDSMLDTLKGDIKLGVDFVK 311 The following BLAST results are available for this feature:
BLAST of CX671830 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 154
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Sequences
The
following sequences are available for this feature:
EST sequence >CX671830 ID=CX671830; Name=CX671830; organism=Citrus sinensis; type=EST; length=699bpback to top |