CX671830

Overview
NameCX671830
Unique NameCX671830
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length699
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX671830 vs. ExPASy Swiss-Prot
Match: MDH_YERPY (Malate dehydrogenase OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=mdh PE=3 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 2.792e-30
Identity = 71/145 (48.97%), Postives = 95/145 (65.52%), Query Frame = -1 
Query:  265 VDVPVVEGHAGVTILPLLSQVKPSCSLTPTEIDYLTDRIQNGGTEVVEAKAGAGSATLSMAYAAAKFADACLRGLRGDASVIECAYVASTVTELPFFASKVRLGRAGIEEIYSLGPLNEYERAGLEKAKKELAGSIQKGVSFVRK 699
            ++VPV+ GH+GVTILPLLSQ+ P  S T  E+  LT RIQN GTEVVEAKAG GSATLSM  AAA+F  + +R L+G+++V+EC+YV        FFA  + LG+ G+ E   +G L+ +E+  LE     L   I+ G  FV +
Sbjct:  169 IEVPVIGGHSGVTILPLLSQI-PGVSFTEQEVADLTKRIQNAGTEVVEAKAGGGSATLSMGQAAARFGLSLVRALQGESNVVECSYVEGDGKYARFFAQPILLGKNGVAERKDIGKLSAFEQQALENMLDVLHKDIELGEKFVNQ 312
[Close]
BLAST of CX671830 vs. ExPASy Swiss-Prot
Match: MDH_YERPS (Malate dehydrogenase OS=Yersinia pseudotuberculosis GN=mdh PE=3 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 2.792e-30
Identity = 71/145 (48.97%), Postives = 95/145 (65.52%), Query Frame = -1 
Query:  265 VDVPVVEGHAGVTILPLLSQVKPSCSLTPTEIDYLTDRIQNGGTEVVEAKAGAGSATLSMAYAAAKFADACLRGLRGDASVIECAYVASTVTELPFFASKVRLGRAGIEEIYSLGPLNEYERAGLEKAKKELAGSIQKGVSFVRK 699
            ++VPV+ GH+GVTILPLLSQ+ P  S T  E+  LT RIQN GTEVVEAKAG GSATLSM  AAA+F  + +R L+G+++V+EC+YV        FFA  + LG+ G+ E   +G L+ +E+  LE     L   I+ G  FV +
Sbjct:  169 IEVPVIGGHSGVTILPLLSQI-PGVSFTEQEVADLTKRIQNAGTEVVEAKAGGGSATLSMGQAAARFGLSLVRALQGESNVVECSYVEGDGKYARFFAQPILLGKNGVAERKDIGKLSAFEQQALENMLDVLHKDIELGEKFVNQ 312
[Close]
BLAST of CX671830 vs. ExPASy Swiss-Prot
Match: MDH_YERPP (Malate dehydrogenase OS=Yersinia pestis (strain Pestoides F) GN=mdh PE=3 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 2.792e-30
Identity = 71/145 (48.97%), Postives = 95/145 (65.52%), Query Frame = -1 
Query:  265 VDVPVVEGHAGVTILPLLSQVKPSCSLTPTEIDYLTDRIQNGGTEVVEAKAGAGSATLSMAYAAAKFADACLRGLRGDASVIECAYVASTVTELPFFASKVRLGRAGIEEIYSLGPLNEYERAGLEKAKKELAGSIQKGVSFVRK 699
            ++VPV+ GH+GVTILPLLSQ+ P  S T  E+  LT RIQN GTEVVEAKAG GSATLSM  AAA+F  + +R L+G+++V+EC+YV        FFA  + LG+ G+ E   +G L+ +E+  LE     L   I+ G  FV +
Sbjct:  169 IEVPVIGGHSGVTILPLLSQI-PGVSFTEQEVADLTKRIQNAGTEVVEAKAGGGSATLSMGQAAARFGLSLVRALQGESNVVECSYVEGDGKYARFFAQPILLGKNGVAERKDIGKLSAFEQQALENMLDVLHKDIELGEKFVNQ 312
[Close]
BLAST of CX671830 vs. ExPASy Swiss-Prot
Match: MDH_YERPN (Malate dehydrogenase OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=mdh PE=3 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 2.792e-30
Identity = 71/145 (48.97%), Postives = 95/145 (65.52%), Query Frame = -1 
Query:  265 VDVPVVEGHAGVTILPLLSQVKPSCSLTPTEIDYLTDRIQNGGTEVVEAKAGAGSATLSMAYAAAKFADACLRGLRGDASVIECAYVASTVTELPFFASKVRLGRAGIEEIYSLGPLNEYERAGLEKAKKELAGSIQKGVSFVRK 699
            ++VPV+ GH+GVTILPLLSQ+ P  S T  E+  LT RIQN GTEVVEAKAG GSATLSM  AAA+F  + +R L+G+++V+EC+YV        FFA  + LG+ G+ E   +G L+ +E+  LE     L   I+ G  FV +
Sbjct:  169 IEVPVIGGHSGVTILPLLSQI-PGVSFTEQEVADLTKRIQNAGTEVVEAKAGGGSATLSMGQAAARFGLSLVRALQGESNVVECSYVEGDGKYARFFAQPILLGKNGVAERKDIGKLSAFEQQALENMLDVLHKDIELGEKFVNQ 312
[Close]
BLAST of CX671830 vs. ExPASy Swiss-Prot
Match: MDH_YERPG (Malate dehydrogenase OS=Yersinia pestis bv. Antiqua (strain Angola) GN=mdh PE=3 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 2.792e-30
Identity = 71/145 (48.97%), Postives = 95/145 (65.52%), Query Frame = -1 
Query:  265 VDVPVVEGHAGVTILPLLSQVKPSCSLTPTEIDYLTDRIQNGGTEVVEAKAGAGSATLSMAYAAAKFADACLRGLRGDASVIECAYVASTVTELPFFASKVRLGRAGIEEIYSLGPLNEYERAGLEKAKKELAGSIQKGVSFVRK 699
            ++VPV+ GH+GVTILPLLSQ+ P  S T  E+  LT RIQN GTEVVEAKAG GSATLSM  AAA+F  + +R L+G+++V+EC+YV        FFA  + LG+ G+ E   +G L+ +E+  LE     L   I+ G  FV +
Sbjct:  169 IEVPVIGGHSGVTILPLLSQI-PGVSFTEQEVADLTKRIQNAGTEVVEAKAGGGSATLSMGQAAARFGLSLVRALQGESNVVECSYVEGDGKYARFFAQPILLGKNGVAERKDIGKLSAFEQQALENMLDVLHKDIELGEKFVNQ 312
[Close]
BLAST of CX671830 vs. ExPASy Swiss-Prot
Match: MDH_YERPE (Malate dehydrogenase OS=Yersinia pestis GN=mdh PE=3 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 2.792e-30
Identity = 71/145 (48.97%), Postives = 95/145 (65.52%), Query Frame = -1 
Query:  265 VDVPVVEGHAGVTILPLLSQVKPSCSLTPTEIDYLTDRIQNGGTEVVEAKAGAGSATLSMAYAAAKFADACLRGLRGDASVIECAYVASTVTELPFFASKVRLGRAGIEEIYSLGPLNEYERAGLEKAKKELAGSIQKGVSFVRK 699
            ++VPV+ GH+GVTILPLLSQ+ P  S T  E+  LT RIQN GTEVVEAKAG GSATLSM  AAA+F  + +R L+G+++V+EC+YV        FFA  + LG+ G+ E   +G L+ +E+  LE     L   I+ G  FV +
Sbjct:  169 IEVPVIGGHSGVTILPLLSQI-PGVSFTEQEVADLTKRIQNAGTEVVEAKAGGGSATLSMGQAAARFGLSLVRALQGESNVVECSYVEGDGKYARFFAQPILLGKNGVAERKDIGKLSAFEQQALENMLDVLHKDIELGEKFVNQ 312
[Close]
BLAST of CX671830 vs. ExPASy Swiss-Prot
Match: MDH_YERPB (Malate dehydrogenase OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=mdh PE=3 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 2.792e-30
Identity = 71/145 (48.97%), Postives = 95/145 (65.52%), Query Frame = -1 
Query:  265 VDVPVVEGHAGVTILPLLSQVKPSCSLTPTEIDYLTDRIQNGGTEVVEAKAGAGSATLSMAYAAAKFADACLRGLRGDASVIECAYVASTVTELPFFASKVRLGRAGIEEIYSLGPLNEYERAGLEKAKKELAGSIQKGVSFVRK 699
            ++VPV+ GH+GVTILPLLSQ+ P  S T  E+  LT RIQN GTEVVEAKAG GSATLSM  AAA+F  + +R L+G+++V+EC+YV        FFA  + LG+ G+ E   +G L+ +E+  LE     L   I+ G  FV +
Sbjct:  169 IEVPVIGGHSGVTILPLLSQI-PGVSFTEQEVADLTKRIQNAGTEVVEAKAGGGSATLSMGQAAARFGLSLVRALQGESNVVECSYVEGDGKYARFFAQPILLGKNGVAERKDIGKLSAFEQQALENMLDVLHKDIELGEKFVNQ 312
[Close]
BLAST of CX671830 vs. ExPASy Swiss-Prot
Match: MDH_YERPA (Malate dehydrogenase OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=mdh PE=3 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 2.792e-30
Identity = 71/145 (48.97%), Postives = 95/145 (65.52%), Query Frame = -1 
Query:  265 VDVPVVEGHAGVTILPLLSQVKPSCSLTPTEIDYLTDRIQNGGTEVVEAKAGAGSATLSMAYAAAKFADACLRGLRGDASVIECAYVASTVTELPFFASKVRLGRAGIEEIYSLGPLNEYERAGLEKAKKELAGSIQKGVSFVRK 699
            ++VPV+ GH+GVTILPLLSQ+ P  S T  E+  LT RIQN GTEVVEAKAG GSATLSM  AAA+F  + +R L+G+++V+EC+YV        FFA  + LG+ G+ E   +G L+ +E+  LE     L   I+ G  FV +
Sbjct:  169 IEVPVIGGHSGVTILPLLSQI-PGVSFTEQEVADLTKRIQNAGTEVVEAKAGGGSATLSMGQAAARFGLSLVRALQGESNVVECSYVEGDGKYARFFAQPILLGKNGVAERKDIGKLSAFEQQALENMLDVLHKDIELGEKFVNQ 312
[Close]
BLAST of CX671830 vs. ExPASy Swiss-Prot
Match: MDH_YERP3 (Malate dehydrogenase OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=mdh PE=3 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 2.792e-30
Identity = 71/145 (48.97%), Postives = 95/145 (65.52%), Query Frame = -1 
Query:  265 VDVPVVEGHAGVTILPLLSQVKPSCSLTPTEIDYLTDRIQNGGTEVVEAKAGAGSATLSMAYAAAKFADACLRGLRGDASVIECAYVASTVTELPFFASKVRLGRAGIEEIYSLGPLNEYERAGLEKAKKELAGSIQKGVSFVRK 699
            ++VPV+ GH+GVTILPLLSQ+ P  S T  E+  LT RIQN GTEVVEAKAG GSATLSM  AAA+F  + +R L+G+++V+EC+YV        FFA  + LG+ G+ E   +G L+ +E+  LE     L   I+ G  FV +
Sbjct:  169 IEVPVIGGHSGVTILPLLSQI-PGVSFTEQEVADLTKRIQNAGTEVVEAKAGGGSATLSMGQAAARFGLSLVRALQGESNVVECSYVEGDGKYARFFAQPILLGKNGVAERKDIGKLSAFEQQALENMLDVLHKDIELGEKFVNQ 312
[Close]
BLAST of CX671830 vs. ExPASy Swiss-Prot
Match: MDH_YERE8 (Malate dehydrogenase OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=mdh PE=3 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 2.792e-30
Identity = 71/144 (49.31%), Postives = 95/144 (65.97%), Query Frame = -1 
Query:  268 VDVPVVEGHAGVTILPLLSQVKPSCSLTPTEIDYLTDRIQNGGTEVVEAKAGAGSATLSMAYAAAKFADACLRGLRGDASVIECAYVASTVTELPFFASKVRLGRAGIEEIYSLGPLNEYERAGLEKAKKELAGSIQKGVSFVR 699
            ++VPV+ GH+GVTILPLLSQ+ P  S T  E+  LT RIQN GTEVVEAKAG GSATLSM  AAA+F  + +R L+G+++V+EC+YV        FFA  + LG+ G+ E   +G L+ +E+  LE     L   I+ G  FV+
Sbjct:  169 IEVPVIGGHSGVTILPLLSQI-PGISFTEQEVIDLTKRIQNAGTEVVEAKAGGGSATLSMGQAAARFGLSLVRALQGESNVVECSYVEGDGKYARFFAQPILLGKDGVAERKDIGKLSAFEQQALENMLDVLHKDIELGEQFVK 311
The following BLAST results are available for this feature:
BLAST of CX671830 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 154
Match NameE-valueIdentityDescription
MDH_YERPY2.792e-3048.97Malate dehydrogenase OS=Yersinia pseudotuberculosi... [more]
MDH_YERPS2.792e-3048.97Malate dehydrogenase OS=Yersinia pseudotuberculosi... [more]
MDH_YERPP2.792e-3048.97Malate dehydrogenase OS=Yersinia pestis (strain Pe... [more]
MDH_YERPN2.792e-3048.97Malate dehydrogenase OS=Yersinia pestis bv. Antiqu... [more]
MDH_YERPG2.792e-3048.97Malate dehydrogenase OS=Yersinia pestis bv. Antiqu... [more]
MDH_YERPE2.792e-3048.97Malate dehydrogenase OS=Yersinia pestis GN=mdh PE=... [more]
MDH_YERPB2.792e-3048.97Malate dehydrogenase OS=Yersinia pseudotuberculosi... [more]
MDH_YERPA2.792e-3048.97Malate dehydrogenase OS=Yersinia pestis bv. Antiqu... [more]
MDH_YERP32.792e-3048.97Malate dehydrogenase OS=Yersinia pseudotuberculosi... [more]
MDH_YERE82.792e-3049.31Malate dehydrogenase OS=Yersinia enterocolitica se... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_13D06_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-13D06-G11-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671830 ID=CX671830; Name=CX671830; organism=Citrus sinensis; type=EST; length=699bp
ATTTTGAATTGATTAAAATGATAAGACAGGCGGCAGTTCGTCATCTACAT
ATTCTTTATCCATTCATTACAAGAATATCAAAAGAACCAAACCAACCCCA
CAAAGATGAATCTTTTGCTTCTTCTTTGTACCTAACTTAATTCCATCTGA
TTATGGAAAAACGAAAACCCTACCTCTTATTCTGGGGAAAGTAATCTTGA
GATATTTGAGGCAAACAACAAAAGCACAACCATTATCATTAGTCACCATG
TGATTGGTTACTCATTTCCTGACAAAACTGACTCCCTTCTGAATGCTTCC
CGCTAACTCTTTCTTTGCCTTCTCCAAACCAGCCCTCTCATACTCATTCA
ATGGGCCAAGTGAGTAAATTTCCTCAATTCCAGCACGGCCAAGCCGTACC
TTGGATGCAAAGAAAGGGAGTTCAGTCACCGTAGAAGCCACGTATGCACA
CTCAATAACACTGGCATCCCCCCTCAAACCTCGGAGACAAGCATCTGCAA
ACTTGGCAGCAGCATATGCCATGGATAGAGTGGCCGAACCAGCTCCAGCT
TTTGCCTCAACTACTTCTGTACCACCATTCTGGATACGATCTGTCAAGTA
GTCAATTTCTGTAGGGGTGAGAGAGCATGATGGTTTAACCTGAGATAAAA
GAGGTAAAATAGTAACCCCAGCATGACCCTCCACAACTGGAACATCAAC
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