CX671828
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX671828 vs. ExPASy Swiss-Prot
Match: PPR10_ARATH (Pentatricopeptide repeat-containing protein At1g04840 OS=Arabidopsis thaliana GN=PCMP-H64 PE=2 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 1.112e-31 Identity = 80/221 (36.20%), Postives = 125/221 (56.56%), Query Frame = 2 Query: 161 LTLIKKCKLQTHLHQVHSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPER----NVVSWTAMIVGYASVGDLVEAKTVFDLMPERSNVSWNALIGGLVKIGDLRSARQLFD 811 ++LI CK L VH+ I+++G+ S VA + C SL YS ++F N F+ N L++G ++N+RF F+ ++R PD+ TFP V+K+ S + G A+ AA ++ VD D FV SL+D+Y K ++ A +VF+E P+R +++ W +I GY D+ A T+F MPER++ SW+ LI G V G+L A+QLF+ Sbjct: 33 ISLIHACKDTASLRHVHAQILRRGVLS--SRVAAQLVSCSSLLKSPDYSLSIFRNSEERNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLGFRWLGRALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLINGYCRAKDMHMATTLFRSMPERNSGSWSTLIKGYVDSGELNRAKQLFE 251 HSP 2 Score: 87.4261 bits (215), Expect = 1.010e-16 Identity = 44/143 (30.77%), Postives = 75/143 (52.45%), Query Frame = 2 Query: 296 LSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLM 724 L+ + +F + N W TL+ G+SQ + + + ++ + P++YT V+ ACS ++ G I ++ G+ D +GT+L+D+Y K E+ CA VF M ++++SWTAMI G+A G +A F M Sbjct: 243 LNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQM 385
BLAST of CX671828 vs. ExPASy Swiss-Prot
Match: PP200_ARATH (Pentatricopeptide repeat-containing protein At2g42920, chloroplastic OS=Arabidopsis thaliana GN=PCMP-E75 PE=2 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 4.671e-30 Identity = 66/213 (30.99%), Postives = 123/213 (57.75%), Query Frame = 2 Query: 176 KCKLQTHLHQVHSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLI--REEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMPERSNVSWNALIGGLVKIGDLRSARQLF 808 +C L Q+H+ +IK GL D + ++ C + + ++Y+ VF RI + N F+WNT+++G+S++S +IF+ ++ P + T+P V KA + R+G + VI+ G+++D F+ +++ +Y + A ++F M +VV+W +MI+G+A G + +A+ +FD MP+R+ VSWN++I G V+ G + A +F Sbjct: 34 QCSTMRELKQIHASLIKTGLISDTVTASRVLAFCCASPSDMNYAYLVFTRINHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMF 246 HSP 2 Score: 72.4034 bits (176), Expect = 3.363e-12 Identity = 53/236 (22.46%), Postives = 103/236 (43.64%), Query Frame = 2 Query: 203 QVHSHIIKKGLEQD---HSLVAHFISLCHSLATP---------------------------LSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMP----ERSNVSWNALIGGLVKIGDLRSARQLF 808 Q+H +IK+GLE D + + H C L + + +F+ + N WN+++ G+ +N RF + +F + ++ PD +T ++ AC+++ + +G I ++R + + V T+LID+Y K I VF+ P++ + W +MI+G A+ G A +F + E +VS+ ++ G++ A + F Sbjct: 147 QLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFF 382
BLAST of CX671828 vs. ExPASy Swiss-Prot
Match: PPR15_ARATH (Pentatricopeptide repeat-containing protein At1g06145 OS=Arabidopsis thaliana GN=EMB1444 PE=2 SV=2) HSP 1 Score: 131.339 bits (329), Expect = 6.101e-30 Identity = 74/215 (34.42%), Postives = 118/215 (54.88%), Query Frame = 2 Query: 167 LIKKCKLQTHLHQVHSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMPERSNVSWNALIGGLVKIGDLRSARQLFD 811 +IK+C L + +IK L QD L+ FI+ C S L + + ++ PN F++N L KG+ S I ++VR++R+ P YT+ ++KA S + R G ++QA + ++G V + T+LID Y I ARKVFDEMPER+ ++WT M+ Y V D+ A ++ + M E++ + N LI G + +G+L A LF+ Sbjct: 34 IIKQCSTPKLLESALAAMIKTSLNQDCRLMNQFITACTSFKR-LDLAVSTMTQMQEPNVFVYNALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVKASS--FASRFGESLQAHIWKFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMPERDDIAWTTMVSAYRRVLDMDSANSLANQMSEKNEATSNCLINGYMGLGNLEQAESLFN 245 HSP 2 Score: 97.8265 bits (242), Expect = 7.475e-20 Identity = 50/154 (32.47%), Postives = 88/154 (57.14%), Query Frame = 2 Query: 296 LSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMPERSNVSWNAL 757 L + ++FN++ + W T++KGYSQN R+ E +F +++ E +PD+ T VI AC+H+ + G + ++ G DV++G++L+D+Y K + A VF +P++N+ W ++I G A+ G EA +F M E +V NA+ Sbjct: 237 LEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKM-EMESVKPNAV 389
BLAST of CX671828 vs. ExPASy Swiss-Prot
Match: PP367_ARATH (Pentatricopeptide repeat-containing protein At5g06540 OS=Arabidopsis thaliana GN=PCMP-H88 PE=2 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 7.968e-30 Identity = 68/223 (30.49%), Postives = 120/223 (53.81%), Query Frame = 2 Query: 161 LTLIKKCKLQTHLHQVHSHIIKKGLEQDHSLVAHFISLCHSLAT------PLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMPERSNVSWNALIGGLVKIGDLRSARQLFD 811 L L++ C + L +H +++ L D + + ++LC +T L Y+ +F++I NPN F++N L++ +S + + F + ++++ PD TFP +IKA S + V G + ++R+G DV+V SL+ +Y I+ A ++F +M R+VVSWT+M+ GY G + A+ +FD MP R+ +W+ +I G K A LF+ Sbjct: 16 LALLQSCSSFSDLKIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGIFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFE 238 HSP 2 Score: 72.7886 bits (177), Expect = 2.575e-12 Identity = 44/165 (26.67%), Postives = 90/165 (54.55%), Query Frame = 2 Query: 314 VFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMPERS----NVSWNALI-----GGLVKIG 781 +F+ + + N F W+ ++ GY++N+ F + +F + RE V ++ VI +C+H+ ++ G V++ + ++ +GT+L+D++ + +I A VF+ +PE + +SW+++I G A G +A F M +V++ A++ GGLV+ G Sbjct: 205 MFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKG 369
BLAST of CX671828 vs. ExPASy Swiss-Prot
Match: PP249_ARATH (Pentatricopeptide repeat-containing protein At3g22690 OS=Arabidopsis thaliana GN=PCMP-H56 PE=2 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 1.041e-29 Identity = 77/246 (31.30%), Postives = 126/246 (51.22%), Query Frame = 2 Query: 95 MLPNCSRSAPINFPKPSCLLSALTLIKKCKLQTHLHQVHSHIIKKGLEQDHSLVAHFISLCHSLAT--PLSYSTAVFNRIVNPNT-FLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMPERSNVSWNA-----LIGGLVKIGDLRSARQLF 808 +L + + P + C + + +K CK L H + K+GL+ D S + ++ L T LS++ VF + T F++N+L++GY+ + E +F+R++ PDKYTFP + AC+ + G I +++ G +D+FV SL+ Y + E+ ARKVFDEM ERNVVSWT+MI GYA +A +F M V+ N+ +I K+ DL + +++ Sbjct: 14 VLATTTTTKPSLLNQSKCTKATPSSLKNCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVY 259 HSP 2 Score: 88.1965 bits (217), Expect = 5.923e-17 Identity = 56/221 (25.34%), Postives = 108/221 (48.87%), Query Frame = 2 Query: 146 CLLSALTLIKKCKLQTHLHQVHSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMPERSNVSWNALIGGLVKIGDLRSARQLF 808 C++SA ++ L+T +V++ I G+E + +V+ + + + + + +F+ N L N + Y + E +F ++ PD+ + I +CS + ++ G + V+R G + + +LID+Y K A ++FD M + VV+W +++ GY G++ A F+ MPE++ VSWN +I GLV+ A ++F Sbjct: 241 CVISACAKLED--LETG-EKVYAFIRNSGIEVNDLMVSALVDM-YMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVF 457 HSP 3 Score: 79.337 bits (194), Expect = 2.751e-14 Identity = 53/179 (29.61%), Postives = 91/179 (50.84%), Query Frame = 2 Query: 203 QVHSHIIKKGLEQD----HSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAV-PDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLM 724 Q+H I+K G +D +SLV HF + C L + + VF+ + N W +++ GY++ + +F R++R+E V P+ T VI AC+ + + G + A + G++ + + ++L+D+Y K I A+++FDE N+ AM Y G EA VF+LM Sbjct: 155 QIHGLIVKMGYAKDLFVQNSLV-HFYAECGELDS----ARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLM 328 HSP 4 Score: 72.4034 bits (176), Expect = 3.363e-12 Identity = 50/192 (26.04%), Postives = 90/192 (46.88%), Query Frame = 2 Query: 161 LTLIKKCKLQTHLHQVHSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAV-PDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMPER 733 + + KC Q ++ + K + +S+VA ++ A ++ T IV+ WNT++ G Q S F E +F + +E V D T + AC H+ ++ I + + G+ DV +GT+L+D++ + + A +F+ + R+V +WTA I A G+ A +FD M E+ Sbjct: 379 IDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVS-----WNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQ 565
BLAST of CX671828 vs. ExPASy Swiss-Prot
Match: PP261_ARATH (Pentatricopeptide repeat-containing protein At3g29230 OS=Arabidopsis thaliana GN=PCMP-E27 PE=2 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 1.359e-29 Identity = 73/247 (29.55%), Postives = 125/247 (50.61%), Query Frame = 2 Query: 170 IKKCKLQTHLHQVHSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYG---------------------------------KRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMPERSNVSWNALIGGLVKIGDLRSARQLFD 811 + KC + Q+H+ II++ L +D + IS SL + + VFN++ PN L N+L++ ++QNS+ + F +F + R D +T+P ++KACS + + + + G+ D++V +LID Y K E+ AR++FDEMP+R+++SW M+ GYA ++ +A +F+ MPER+ VSW+ ++ G K GD+ AR +FD Sbjct: 26 LPKCANLNQVKQLHAQIIRRNLHEDLHIAPKLISAL-SLCRQTNLAVRVFNQVQEPNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARRLFDEMPQRDLISWNTMLDGYARCREMSKAFELFEKMPERNTVSWSTMVMGYSKAGDMEMARVMFD 271 HSP 2 Score: 79.337 bits (194), Expect = 2.751e-14 Identity = 62/222 (27.93%), Postives = 104/222 (46.85%), Query Frame = 2 Query: 167 LIKKCKLQTHLHQV---HSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTAV--FNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLM--PERSNVSWNALIGGLVKIGDLRSARQLFD 811 L+K C Q+ L V H+HI K GL D V + + C+S L A+ F ++ +T WN++L G + + +F + +P Q +I W +++D Y + +E+S A ++F++MPERN VSW+ M++GY+ GD+ A+ +FD M P ++ V+W +I G + G L+ A +L D Sbjct: 123 LLKACSGQSWLPVVKMMHNHIEKLGLSSD-IYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARRLF------DEMP------------------------QRDLISWN---------TMLDGYARCREMSKAFELFEKMPERNTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVD 304
BLAST of CX671828 vs. ExPASy Swiss-Prot
Match: PP201_ARATH (Pentatricopeptide repeat-containing protein At2g44880 OS=Arabidopsis thaliana GN=PCMP-E9 PE=2 SV=2) HSP 1 Score: 129.413 bits (324), Expect = 2.318e-29 Identity = 70/201 (34.83%), Postives = 120/201 (59.70%), Query Frame = 2 Query: 218 IIKKGLEQDHSLVAHFISLCHSLATPLSYSTAVFN-RIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEA-VPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMPE-RSNVSWNALIGGLVKIGDLRSARQLFD 811 +++ +E + + F+ + S A + Y+ +F+ R ++FL N+++K Y + ++ + F ++ L +E PD +TF + K+CS + V +G + + + R+G D++V T ++D+Y K ++ CAR FDEMP R+ VSWTA+I GY G+L A +FD MP + V +NA++ G VK GD+ SAR+LFD Sbjct: 1 MLRHAIETNVQIFTKFLVISAS-AVGIGYARKLFDQRPQRDDSFLSNSMIKAYLETRQYPDSFALYRDLRKETCFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYAKFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMPHVKDVVIYNAMMDGFVKSGDMTSARRLFD 200 HSP 2 Score: 82.4185 bits (202), Expect = 3.250e-15 Identity = 61/193 (31.61%), Postives = 94/193 (48.70%), Query Frame = 2 Query: 236 EQDHSLVAHFISLCHSLATPLSYSTA--VFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAV-PDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLM---PERSNVSWNALI-----GGLVKIG 781 E H V + ++ H A +F+ + N WNT++ GY QN + E +F + ++ PD T V+ A S ++ G V R +D+ V V T+++D+Y K EI A+++FDEMPE+ V SW AMI GYA G+ A +F M + ++ A+I GGLV+ G Sbjct: 201 EMTHKTVITWTTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAALDLFVTMMIEEKPDEITMLAVITACNHGGLVEEG 393 HSP 3 Score: 75.8702 bits (185), Expect = 3.042e-13 Identity = 32/74 (43.24%), Postives = 53/74 (71.62%), Query Frame = 2 Query: 545 EDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMPERSNVSWNALIGG 766 +DV + +++D + K +++ AR++FDEM + V++WT MI GY ++ D+ A+ +FD MPER+ VSWN +IGG Sbjct: 174 KDVVIYNAMMDGFVKSGDMTSARRLFDEMTHKTVITWTTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMIGG 247
BLAST of CX671828 vs. ExPASy Swiss-Prot
Match: PPR43_ARATH (Pentatricopeptide repeat-containing protein At1g14470 OS=Arabidopsis thaliana GN=PCMP-A4 PE=2 SV=2) HSP 1 Score: 127.487 bits (319), Expect = 8.809e-29 Identity = 70/206 (33.98%), Postives = 112/206 (54.37%), Query Frame = 2 Query: 197 LHQVHSHIIK-KGLEQDHSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMPERSNVSWNALIGGLVKIGDLRSARQLFD 811 L+Q+H+ +I L + + IS C L P Y+ +F+ + PN F+ N++ K +S+ +V ++ + R +PD ++FP+VIK+ R G QA V + G +D +V ++D+Y K + + ARKVFD++ +R W MI GY G+ EA +FD+MPE VSW +I G K+ DL +AR+ FD Sbjct: 22 LNQIHAQLIVFNSLPRQSYWASRIISCCTRLRAPSYYTRLIFDSVTFPNVFVVNSMFKYFSKMDMANDVLRLYEQRSRCGIMPDAFSFPVVIKSAG-----RFGILFQALVEKLGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVMISGYWKWGNKEEACKLFDMMPENDVVSWTVMITGFAKVKDLENARKYFD 222 HSP 2 Score: 109.768 bits (273), Expect = 1.901e-23 Identity = 57/166 (34.34%), Postives = 96/166 (57.83%), Query Frame = 2 Query: 317 FNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEM-PERNVVSWTAMIVGYASVGDLVEAKTVFDLMPERSNVSWNALIGGLVKIGDLRSARQLFD 811 F+R+ + WN +L GY+QN + +F ++R P++ T+ +VI ACS ++ + V + FV T+L+D++ K ++I AR++F+E+ +RN+V+W AMI GY +GD+ A+ +FD MP+R+ VSWN+LI G G A + F+ Sbjct: 221 FDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFE 386 HSP 3 Score: 70.4774 bits (171), Expect = 1.278e-11 Identity = 46/176 (26.14%), Postives = 87/176 (49.43%), Query Frame = 2 Query: 296 LSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIRE-EAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMP----ERSNVSWNALIGGLVKIGDLRSARQLF 808 +S + +F+ + N WN+L+ GY+ N + F +I ++ PD+ T V+ AC H+ + G I + + + + SLI +Y + + A++VFDEM ER+VVS+ + +A+ GD VE + M E V++ +++ + G L+ +++F Sbjct: 347 MSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKERDVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRVTYTSVLTACNRAGLLKEGQRIF 522
BLAST of CX671828 vs. ExPASy Swiss-Prot
Match: PP435_ARATH (Putative pentatricopeptide repeat-containing protein At5g59200, chloroplastic OS=Arabidopsis thaliana GN=PCMP-E41 PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 2.563e-28 Identity = 67/216 (31.02%), Postives = 122/216 (56.48%), Query Frame = 2 Query: 161 LTLIKKCKLQTHLHQVHSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMPERSNVSWNALIGGLVKIGDLRSARQLF 808 +++++ CK H+ +H+ II+ +QD +V I +C +L + + Y+ VF+ + NPN +L+ ++ G+ + R + +++ R+I +PD Y V+KAC ++ I A V++ G VG ++++YGK E+ A+K+FDEMP+R+ V+ T MI Y+ G + EA +F + + V W A+I GLV+ ++ A +LF Sbjct: 33 ISVLRSCKNIAHVPSIHAKIIRTFHDQDAFVVFELIRVCSTLDS-VDYAYDVFSYVSNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKACD----LKVCREIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELF 243 HSP 2 Score: 70.4774 bits (171), Expect = 1.278e-11 Identity = 52/191 (27.23%), Postives = 94/191 (49.21%), Query Frame = 2 Query: 236 EQDHSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMPER----SNVSWNALI-----GGLVKIG 781 ++DH I+ C+S + + +F + +T W ++ G +N + +F + E +++T V+ ACS + ++ G + + V ++ FVG +LI++Y + +I+ AR+VF M +++V+S+ MI G A G VEA F M R + V+ AL+ GGL+ IG Sbjct: 186 DRDHVAATVMIN-CYSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIG 375
BLAST of CX671828 vs. ExPASy Swiss-Prot
Match: PP224_ARATH (Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 5.710e-28 Identity = 70/216 (32.41%), Postives = 114/216 (52.78%), Query Frame = 2 Query: 164 TLIKKCKLQTHLHQVHSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFD--EMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMPERS-NVSWNALIGGLVKIGDLRSARQ 802 +LI + L Q+H+ ++ GL+ L+ I S ++++ VF+ + P F WN +++GYS+N+ F + ++ + PD +TFP ++KACS + ++ G + A V R G D DVFV LI LY K + + AR VF+ +PER +VSWTA++ YA G+ +EA +F M + W AL+ L L+ +Q Sbjct: 26 SLIDSATHKAQLKQIHARLLVLGLQFSGFLITKLIHASSSFGD-ITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQ 240 HSP 2 Score: 103.605 bits (257), Expect = 1.362e-21 Identity = 64/204 (31.37%), Postives = 110/204 (53.92%), Query Frame = 2 Query: 149 LLSALTLIKKCKLQTHLHQVHSHIIKKGLEQDHSLVAHFISL---CHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMPERSNVSWN 751 +L+A T ++ K +H+ ++K GLE + L+ ++ C +AT + +F+++ +PN LWN ++ GY++N E +F +I ++ PD + I AC+ V S+ + ++ V R +DVF+ ++LID++ K + AR VFD +R+VV W+AMIVGY G EA +++ M ER V N Sbjct: 228 VLNAFTCLQDLKQG---RSIHASVVKMGLEIEPDLLISLNTMYAKCGQVAT----AKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAM-ERGGVHPN 423 HSP 3 Score: 88.9669 bits (219), Expect = 3.472e-17 Identity = 58/224 (25.89%), Postives = 111/224 (49.55%), Query Frame = 2 Query: 167 LIKKCKLQTHLHQ---VHSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFL--WNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMPER----SNVSWNALIGGLVKIGDLRSARQLFD 811 L+K C +HL VH+ + + G + D + I+L ++ L + VF + P + W ++ Y+QN +E IF ++ + + PD V+ A + + +++G +I A+V++ G++ + + SL +Y K +++ A+ +FD+M N++ W AMI GYA G EA +F M + +S + I ++G L AR +++ Sbjct: 125 LLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIAL-YAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYE 347 The following BLAST results are available for this feature:
BLAST of CX671828 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 193
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Sequences
The
following sequences are available for this feature:
EST sequence >CX671828 ID=CX671828; Name=CX671828; organism=Citrus sinensis; type=EST; length=813bpback to top |