CX671828

Overview
NameCX671828
Unique NameCX671828
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length813
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5099 contig Csv1_Contig5099:1..813. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX671828 vs. ExPASy Swiss-Prot
Match: PPR10_ARATH (Pentatricopeptide repeat-containing protein At1g04840 OS=Arabidopsis thaliana GN=PCMP-H64 PE=2 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 1.112e-31
Identity = 80/221 (36.20%), Postives = 125/221 (56.56%), Query Frame = 2
Query:  161 LTLIKKCKLQTHLHQVHSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPER----NVVSWTAMIVGYASVGDLVEAKTVFDLMPERSNVSWNALIGGLVKIGDLRSARQLFD 811
            ++LI  CK    L  VH+ I+++G+    S VA  +  C SL     YS ++F      N F+ N L++G ++N+RF      F+ ++R    PD+ TFP V+K+ S +     G A+ AA ++  VD D FV  SL+D+Y K  ++  A +VF+E P+R    +++ W  +I GY    D+  A T+F  MPER++ SW+ LI G V  G+L  A+QLF+
Sbjct:   33 ISLIHACKDTASLRHVHAQILRRGVLS--SRVAAQLVSCSSLLKSPDYSLSIFRNSEERNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLGFRWLGRALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLINGYCRAKDMHMATTLFRSMPERNSGSWSTLIKGYVDSGELNRAKQLFE 251          

HSP 2 Score: 87.4261 bits (215), Expect = 1.010e-16
Identity = 44/143 (30.77%), Postives = 75/143 (52.45%), Query Frame = 2
Query:  296 LSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLM 724
            L+ +  +F  +   N   W TL+ G+SQ   +    + +  ++ +   P++YT   V+ ACS   ++  G  I   ++  G+  D  +GT+L+D+Y K  E+ CA  VF  M  ++++SWTAMI G+A  G   +A   F  M
Sbjct:  243 LNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQM 385          
BLAST of CX671828 vs. ExPASy Swiss-Prot
Match: PP200_ARATH (Pentatricopeptide repeat-containing protein At2g42920, chloroplastic OS=Arabidopsis thaliana GN=PCMP-E75 PE=2 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 4.671e-30
Identity = 66/213 (30.99%), Postives = 123/213 (57.75%), Query Frame = 2
Query:  176 KCKLQTHLHQVHSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLI--REEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMPERSNVSWNALIGGLVKIGDLRSARQLF 808
            +C     L Q+H+ +IK GL  D    +  ++ C +  + ++Y+  VF RI + N F+WNT+++G+S++S      +IF+ ++       P + T+P V KA   +   R+G  +   VI+ G+++D F+  +++ +Y     +  A ++F  M   +VV+W +MI+G+A  G + +A+ +FD MP+R+ VSWN++I G V+ G  + A  +F
Sbjct:   34 QCSTMRELKQIHASLIKTGLISDTVTASRVLAFCCASPSDMNYAYLVFTRINHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMF 246          

HSP 2 Score: 72.4034 bits (176), Expect = 3.363e-12
Identity = 53/236 (22.46%), Postives = 103/236 (43.64%), Query Frame = 2
Query:  203 QVHSHIIKKGLEQD---HSLVAHFISLCHSLATP---------------------------LSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMP----ERSNVSWNALIGGLVKIGDLRSARQLF 808
            Q+H  +IK+GLE D    + + H    C  L                              +  +  +F+ +   N   WN+++ G+ +N RF +   +F  +  ++  PD +T   ++ AC+++ +  +G  I   ++R   + +  V T+LID+Y K   I     VF+  P++ +  W +MI+G A+ G    A  +F  +     E  +VS+  ++      G++  A + F
Sbjct:  147 QLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFF 382          
BLAST of CX671828 vs. ExPASy Swiss-Prot
Match: PPR15_ARATH (Pentatricopeptide repeat-containing protein At1g06145 OS=Arabidopsis thaliana GN=EMB1444 PE=2 SV=2)

HSP 1 Score: 131.339 bits (329), Expect = 6.101e-30
Identity = 74/215 (34.42%), Postives = 118/215 (54.88%), Query Frame = 2
Query:  167 LIKKCKLQTHLHQVHSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMPERSNVSWNALIGGLVKIGDLRSARQLFD 811
            +IK+C     L    + +IK  L QD  L+  FI+ C S    L  + +   ++  PN F++N L KG+   S  I    ++VR++R+   P  YT+  ++KA S   + R G ++QA + ++G    V + T+LID Y     I  ARKVFDEMPER+ ++WT M+  Y  V D+  A ++ + M E++  + N LI G + +G+L  A  LF+
Sbjct:   34 IIKQCSTPKLLESALAAMIKTSLNQDCRLMNQFITACTSFKR-LDLAVSTMTQMQEPNVFVYNALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVKASS--FASRFGESLQAHIWKFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMPERDDIAWTTMVSAYRRVLDMDSANSLANQMSEKNEATSNCLINGYMGLGNLEQAESLFN 245          

HSP 2 Score: 97.8265 bits (242), Expect = 7.475e-20
Identity = 50/154 (32.47%), Postives = 88/154 (57.14%), Query Frame = 2
Query:  296 LSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMPERSNVSWNAL 757
            L  + ++FN++   +   W T++KGYSQN R+ E   +F +++ E  +PD+ T   VI AC+H+  +  G  +    ++ G   DV++G++L+D+Y K   +  A  VF  +P++N+  W ++I G A+ G   EA  +F  M E  +V  NA+
Sbjct:  237 LEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKM-EMESVKPNAV 389          
BLAST of CX671828 vs. ExPASy Swiss-Prot
Match: PP367_ARATH (Pentatricopeptide repeat-containing protein At5g06540 OS=Arabidopsis thaliana GN=PCMP-H88 PE=2 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 7.968e-30
Identity = 68/223 (30.49%), Postives = 120/223 (53.81%), Query Frame = 2
Query:  161 LTLIKKCKLQTHLHQVHSHIIKKGLEQDHSLVAHFISLCHSLAT------PLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMPERSNVSWNALIGGLVKIGDLRSARQLFD 811
            L L++ C   + L  +H  +++  L  D  + +  ++LC   +T       L Y+  +F++I NPN F++N L++ +S  +   + F  + ++++    PD  TFP +IKA S +  V  G    + ++R+G   DV+V  SL+ +Y     I+ A ++F +M  R+VVSWT+M+ GY   G +  A+ +FD MP R+  +W+ +I G  K      A  LF+
Sbjct:   16 LALLQSCSSFSDLKIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGIFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFE 238          

HSP 2 Score: 72.7886 bits (177), Expect = 2.575e-12
Identity = 44/165 (26.67%), Postives = 90/165 (54.55%), Query Frame = 2
Query:  314 VFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMPERS----NVSWNALI-----GGLVKIG 781
            +F+ + + N F W+ ++ GY++N+ F +   +F  + RE  V ++     VI +C+H+ ++  G      V++  +  ++ +GT+L+D++ +  +I  A  VF+ +PE + +SW+++I G A  G   +A   F  M        +V++ A++     GGLV+ G
Sbjct:  205 MFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKG 369          
BLAST of CX671828 vs. ExPASy Swiss-Prot
Match: PP249_ARATH (Pentatricopeptide repeat-containing protein At3g22690 OS=Arabidopsis thaliana GN=PCMP-H56 PE=2 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 1.041e-29
Identity = 77/246 (31.30%), Postives = 126/246 (51.22%), Query Frame = 2
Query:   95 MLPNCSRSAPINFPKPSCLLSALTLIKKCKLQTHLHQVHSHIIKKGLEQDHSLVAHFISLCHSLAT--PLSYSTAVFNRIVNPNT-FLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMPERSNVSWNA-----LIGGLVKIGDLRSARQLF 808
            +L   + + P    +  C  +  + +K CK    L   H  + K+GL+ D S +   ++    L T   LS++  VF    +  T F++N+L++GY+ +    E   +F+R++     PDKYTFP  + AC+   +   G  I   +++ G  +D+FV  SL+  Y +  E+  ARKVFDEM ERNVVSWT+MI GYA      +A  +F  M     V+ N+     +I    K+ DL +  +++
Sbjct:   14 VLATTTTTKPSLLNQSKCTKATPSSLKNCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVY 259          

HSP 2 Score: 88.1965 bits (217), Expect = 5.923e-17
Identity = 56/221 (25.34%), Postives = 108/221 (48.87%), Query Frame = 2
Query:  146 CLLSALTLIKKCKLQTHLHQVHSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMPERSNVSWNALIGGLVKIGDLRSARQLF 808
            C++SA   ++   L+T   +V++ I   G+E +  +V+  + + +     +  +  +F+     N  L N +   Y +     E   +F  ++     PD+ +    I +CS + ++  G +    V+R G +    +  +LID+Y K      A ++FD M  + VV+W +++ GY   G++  A   F+ MPE++ VSWN +I GLV+      A ++F
Sbjct:  241 CVISACAKLED--LETG-EKVYAFIRNSGIEVNDLMVSALVDM-YMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVF 457          

HSP 3 Score: 79.337 bits (194), Expect = 2.751e-14
Identity = 53/179 (29.61%), Postives = 91/179 (50.84%), Query Frame = 2
Query:  203 QVHSHIIKKGLEQD----HSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAV-PDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLM 724
            Q+H  I+K G  +D    +SLV HF + C  L +    +  VF+ +   N   W +++ GY++     +   +F R++R+E V P+  T   VI AC+ +  +  G  + A +   G++ +  + ++L+D+Y K   I  A+++FDE    N+    AM   Y   G   EA  VF+LM
Sbjct:  155 QIHGLIVKMGYAKDLFVQNSLV-HFYAECGELDS----ARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLM 328          

HSP 4 Score: 72.4034 bits (176), Expect = 3.363e-12
Identity = 50/192 (26.04%), Postives = 90/192 (46.88%), Query Frame = 2
Query:  161 LTLIKKCKLQTHLHQVHSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAV-PDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMPER 733
            + +  KC  Q    ++   +  K +   +S+VA ++      A   ++ T     IV+     WNT++ G  Q S F E   +F  +  +E V  D  T   +  AC H+ ++     I   + + G+  DV +GT+L+D++ +  +   A  +F+ +  R+V +WTA I   A  G+   A  +FD M E+
Sbjct:  379 IDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVS-----WNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQ 565          
BLAST of CX671828 vs. ExPASy Swiss-Prot
Match: PP261_ARATH (Pentatricopeptide repeat-containing protein At3g29230 OS=Arabidopsis thaliana GN=PCMP-E27 PE=2 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.359e-29
Identity = 73/247 (29.55%), Postives = 125/247 (50.61%), Query Frame = 2
Query:  170 IKKCKLQTHLHQVHSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYG---------------------------------KRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMPERSNVSWNALIGGLVKIGDLRSARQLFD 811
            + KC     + Q+H+ II++ L +D  +    IS   SL    + +  VFN++  PN  L N+L++ ++QNS+  + F +F  + R     D +T+P ++KACS    +     +   + + G+  D++V  +LID Y                                  K  E+  AR++FDEMP+R+++SW  M+ GYA   ++ +A  +F+ MPER+ VSW+ ++ G  K GD+  AR +FD
Sbjct:   26 LPKCANLNQVKQLHAQIIRRNLHEDLHIAPKLISAL-SLCRQTNLAVRVFNQVQEPNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARRLFDEMPQRDLISWNTMLDGYARCREMSKAFELFEKMPERNTVSWSTMVMGYSKAGDMEMARVMFD 271          

HSP 2 Score: 79.337 bits (194), Expect = 2.751e-14
Identity = 62/222 (27.93%), Postives = 104/222 (46.85%), Query Frame = 2
Query:  167 LIKKCKLQTHLHQV---HSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTAV--FNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLM--PERSNVSWNALIGGLVKIGDLRSARQLFD 811
            L+K C  Q+ L  V   H+HI K GL  D   V + +  C+S    L    A+  F ++   +T  WN++L G  +     +   +F      + +P                        Q  +I W          +++D Y + +E+S A ++F++MPERN VSW+ M++GY+  GD+  A+ +FD M  P ++ V+W  +I G  + G L+ A +L D
Sbjct:  123 LLKACSGQSWLPVVKMMHNHIEKLGLSSD-IYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARRLF------DEMP------------------------QRDLISWN---------TMLDGYARCREMSKAFELFEKMPERNTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVD 304          
BLAST of CX671828 vs. ExPASy Swiss-Prot
Match: PP201_ARATH (Pentatricopeptide repeat-containing protein At2g44880 OS=Arabidopsis thaliana GN=PCMP-E9 PE=2 SV=2)

HSP 1 Score: 129.413 bits (324), Expect = 2.318e-29
Identity = 70/201 (34.83%), Postives = 120/201 (59.70%), Query Frame = 2
Query:  218 IIKKGLEQDHSLVAHFISLCHSLATPLSYSTAVFN-RIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEA-VPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMPE-RSNVSWNALIGGLVKIGDLRSARQLFD 811
            +++  +E +  +   F+ +  S A  + Y+  +F+ R    ++FL N+++K Y +  ++ + F ++  L +E    PD +TF  + K+CS  + V +G  + + + R+G   D++V T ++D+Y K  ++ CAR  FDEMP R+ VSWTA+I GY   G+L  A  +FD MP  +  V +NA++ G VK GD+ SAR+LFD
Sbjct:    1 MLRHAIETNVQIFTKFLVISAS-AVGIGYARKLFDQRPQRDDSFLSNSMIKAYLETRQYPDSFALYRDLRKETCFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYAKFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMPHVKDVVIYNAMMDGFVKSGDMTSARRLFD 200          

HSP 2 Score: 82.4185 bits (202), Expect = 3.250e-15
Identity = 61/193 (31.61%), Postives = 94/193 (48.70%), Query Frame = 2
Query:  236 EQDHSLVAHFISLCHSLATPLSYSTA--VFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAV-PDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLM---PERSNVSWNALI-----GGLVKIG 781
            E  H  V  + ++ H          A  +F+ +   N   WNT++ GY QN +  E   +F  +    ++ PD  T   V+ A S   ++  G      V R  +D+ V V T+++D+Y K  EI  A+++FDEMPE+ V SW AMI GYA  G+   A  +F  M    +   ++  A+I     GGLV+ G
Sbjct:  201 EMTHKTVITWTTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAALDLFVTMMIEEKPDEITMLAVITACNHGGLVEEG 393          

HSP 3 Score: 75.8702 bits (185), Expect = 3.042e-13
Identity = 32/74 (43.24%), Postives = 53/74 (71.62%), Query Frame = 2
Query:  545 EDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMPERSNVSWNALIGG 766
            +DV +  +++D + K  +++ AR++FDEM  + V++WT MI GY ++ D+  A+ +FD MPER+ VSWN +IGG
Sbjct:  174 KDVVIYNAMMDGFVKSGDMTSARRLFDEMTHKTVITWTTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMIGG 247          
BLAST of CX671828 vs. ExPASy Swiss-Prot
Match: PPR43_ARATH (Pentatricopeptide repeat-containing protein At1g14470 OS=Arabidopsis thaliana GN=PCMP-A4 PE=2 SV=2)

HSP 1 Score: 127.487 bits (319), Expect = 8.809e-29
Identity = 70/206 (33.98%), Postives = 112/206 (54.37%), Query Frame = 2
Query:  197 LHQVHSHIIK-KGLEQDHSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMPERSNVSWNALIGGLVKIGDLRSARQLFD 811
            L+Q+H+ +I    L +     +  IS C  L  P  Y+  +F+ +  PN F+ N++ K +S+     +V  ++ +  R   +PD ++FP+VIK+       R G   QA V + G  +D +V   ++D+Y K + +  ARKVFD++ +R    W  MI GY   G+  EA  +FD+MPE   VSW  +I G  K+ DL +AR+ FD
Sbjct:   22 LNQIHAQLIVFNSLPRQSYWASRIISCCTRLRAPSYYTRLIFDSVTFPNVFVVNSMFKYFSKMDMANDVLRLYEQRSRCGIMPDAFSFPVVIKSAG-----RFGILFQALVEKLGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVMISGYWKWGNKEEACKLFDMMPENDVVSWTVMITGFAKVKDLENARKYFD 222          

HSP 2 Score: 109.768 bits (273), Expect = 1.901e-23
Identity = 57/166 (34.34%), Postives = 96/166 (57.83%), Query Frame = 2
Query:  317 FNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEM-PERNVVSWTAMIVGYASVGDLVEAKTVFDLMPERSNVSWNALIGGLVKIGDLRSARQLFD 811
            F+R+   +   WN +L GY+QN    +   +F  ++R    P++ T+ +VI ACS         ++   +    V  + FV T+L+D++ K ++I  AR++F+E+  +RN+V+W AMI GY  +GD+  A+ +FD MP+R+ VSWN+LI G    G    A + F+
Sbjct:  221 FDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFE 386          

HSP 3 Score: 70.4774 bits (171), Expect = 1.278e-11
Identity = 46/176 (26.14%), Postives = 87/176 (49.43%), Query Frame = 2
Query:  296 LSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIRE-EAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMP----ERSNVSWNALIGGLVKIGDLRSARQLF 808
            +S +  +F+ +   N   WN+L+ GY+ N +       F  +I   ++ PD+ T   V+ AC H+  +  G  I   + +  +  +     SLI +Y +   +  A++VFDEM ER+VVS+  +   +A+ GD VE   +   M     E   V++ +++    + G L+  +++F
Sbjct:  347 MSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKERDVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRVTYTSVLTACNRAGLLKEGQRIF 522          
BLAST of CX671828 vs. ExPASy Swiss-Prot
Match: PP435_ARATH (Putative pentatricopeptide repeat-containing protein At5g59200, chloroplastic OS=Arabidopsis thaliana GN=PCMP-E41 PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.563e-28
Identity = 67/216 (31.02%), Postives = 122/216 (56.48%), Query Frame = 2
Query:  161 LTLIKKCKLQTHLHQVHSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMPERSNVSWNALIGGLVKIGDLRSARQLF 808
            +++++ CK   H+  +H+ II+   +QD  +V   I +C +L + + Y+  VF+ + NPN +L+  ++ G+  + R  +  +++ R+I    +PD Y    V+KAC     ++    I A V++ G      VG  ++++YGK  E+  A+K+FDEMP+R+ V+ T MI  Y+  G + EA  +F  +  +  V W A+I GLV+  ++  A +LF
Sbjct:   33 ISVLRSCKNIAHVPSIHAKIIRTFHDQDAFVVFELIRVCSTLDS-VDYAYDVFSYVSNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKACD----LKVCREIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELF 243          

HSP 2 Score: 70.4774 bits (171), Expect = 1.278e-11
Identity = 52/191 (27.23%), Postives = 94/191 (49.21%), Query Frame = 2
Query:  236 EQDHSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMPER----SNVSWNALI-----GGLVKIG 781
            ++DH      I+ C+S    +  +  +F  +   +T  W  ++ G  +N    +   +F  +  E    +++T   V+ ACS + ++  G  + + V    ++   FVG +LI++Y +  +I+ AR+VF  M +++V+S+  MI G A  G  VEA   F  M  R    + V+  AL+     GGL+ IG
Sbjct:  186 DRDHVAATVMIN-CYSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIG 375          
BLAST of CX671828 vs. ExPASy Swiss-Prot
Match: PP224_ARATH (Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 5.710e-28
Identity = 70/216 (32.41%), Postives = 114/216 (52.78%), Query Frame = 2
Query:  164 TLIKKCKLQTHLHQVHSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFD--EMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMPERS-NVSWNALIGGLVKIGDLRSARQ 802
            +LI     +  L Q+H+ ++  GL+    L+   I    S    ++++  VF+ +  P  F WN +++GYS+N+ F +   ++  +      PD +TFP ++KACS +  ++ G  + A V R G D DVFV   LI LY K + +  AR VF+   +PER +VSWTA++  YA  G+ +EA  +F  M +      W AL+  L     L+  +Q
Sbjct:   26 SLIDSATHKAQLKQIHARLLVLGLQFSGFLITKLIHASSSFGD-ITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQ 240          

HSP 2 Score: 103.605 bits (257), Expect = 1.362e-21
Identity = 64/204 (31.37%), Postives = 110/204 (53.92%), Query Frame = 2
Query:  149 LLSALTLIKKCKLQTHLHQVHSHIIKKGLEQDHSLVAHFISL---CHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMPERSNVSWN 751
            +L+A T ++  K       +H+ ++K GLE +  L+    ++   C  +AT    +  +F+++ +PN  LWN ++ GY++N    E   +F  +I ++  PD  +    I AC+ V S+ +  ++   V R    +DVF+ ++LID++ K   +  AR VFD   +R+VV W+AMIVGY   G   EA +++  M ER  V  N
Sbjct:  228 VLNAFTCLQDLKQG---RSIHASVVKMGLEIEPDLLISLNTMYAKCGQVAT----AKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAM-ERGGVHPN 423          

HSP 3 Score: 88.9669 bits (219), Expect = 3.472e-17
Identity = 58/224 (25.89%), Postives = 111/224 (49.55%), Query Frame = 2
Query:  167 LIKKCKLQTHLHQ---VHSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFL--WNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMPER----SNVSWNALIGGLVKIGDLRSARQLFD 811
            L+K C   +HL     VH+ + + G + D  +    I+L ++    L  +  VF  +  P   +  W  ++  Y+QN   +E   IF ++ + +  PD      V+ A + +  +++G +I A+V++ G++ +  +  SL  +Y K  +++ A+ +FD+M   N++ W AMI GYA  G   EA  +F  M  +      +S  + I    ++G L  AR +++
Sbjct:  125 LLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIAL-YAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYE 347          
The following BLAST results are available for this feature:
BLAST of CX671828 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 193
Match NameE-valueIdentityDescription
PPR10_ARATH1.112e-3136.20Pentatricopeptide repeat-containing protein At1g04... [more]
PP200_ARATH4.671e-3030.99Pentatricopeptide repeat-containing protein At2g42... [more]
PPR15_ARATH6.101e-3034.42Pentatricopeptide repeat-containing protein At1g06... [more]
PP367_ARATH7.968e-3030.49Pentatricopeptide repeat-containing protein At5g06... [more]
PP249_ARATH1.041e-2931.30Pentatricopeptide repeat-containing protein At3g22... [more]
PP261_ARATH1.359e-2929.55Pentatricopeptide repeat-containing protein At3g29... [more]
PP201_ARATH2.318e-2934.83Pentatricopeptide repeat-containing protein At2g44... [more]
PPR43_ARATH8.809e-2933.98Pentatricopeptide repeat-containing protein At1g14... [more]
PP435_ARATH2.563e-2831.02Putative pentatricopeptide repeat-containing prote... [more]
PP224_ARATH5.710e-2832.41Pentatricopeptide repeat-containing protein At3g12... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_13D05_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-13D05-G9-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671828 ID=CX671828; Name=CX671828; organism=Citrus sinensis; type=EST; length=813bp
GGACAGTGGGCAACTATCCCGCGAGGGAGAGCTAACTCCAATGCCCAAAA
TTGACGAACCAAACACGCCATGCAAGCACAAGTCCTGCTCTTCGATGCTA
CCTAACTGCTCACGATCAGCGCCCATCAACTTCCCAAAACCATCGTGTCT
CCTTTCCGCTTTAACCCTGATAAAGAAGTGCAAACTCCAAACTCACCTCC
ACCAGGTTCACTCTCACATCATCAAAAAGGGCCTCGAGCAAGATCACTCT
CTCGTTGCCCACTTCATCTCGCTGTGTCACTCCCTCGCCACTCCCTTATC
TTACTCTACCGCCGTCTTCAACCGCATTGTCAATCCCAATACTTTTCTTT
GGAACACCCTCTTAAAAGGGTACTCTCAGAATTCTCGTTTTATTGAGGTT
TTTACGATTTTTGTTCGATTGATTAGAGAGGAAGCGGTGCCTGATAAGTA
TACGTTCCCATTGGTAATTAAGGCGTGTTCGCATGTGCTTAGTGTGAGGG
AAGGAACGGCGATTCAAGCTGCTGTAATTAGGTGGGGGGTTGATGAGGAT
GTGTTTGTGGGAACTAGTTTGATTGACTTATATGGGAAACGTAAAGAGAT
TTCTTGCGCCCGTAAAGTGTTCGATGAAATGCCTGAGAGAAATGTTGTTT
CATGGACAGCGATGATTGTTGGATATGCGAGTGTTGGGGATTTGGTGGAA
GCGAAGACGGTTTTTGATTTAATGCCGGAGAGGAGTAATGTTTCATGGAA
TGCTTTGATTGGGGGGTTAGTGAAGATAGGAGATTTGAGAAGTGCTAGGC
AGTTGTTTGATGA
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