CX671828
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX671828 vs. ExPASy Swiss-Prot
Match: PP428_ARATH (Pentatricopeptide repeat-containing protein At5g50990 OS=Arabidopsis thaliana GN=PCMP-H59 PE=2 SV=2) HSP 1 Score: 69.3218 bits (168), Expect = 2.847e-11 Identity = 39/145 (26.90%), Postives = 74/145 (51.03%), Query Frame = 2 Query: 314 VFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIR-EEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMPERSNVS 745 V + N WN ++ GY +N ++ E ++ + P+K++F + AC+ + + + + +I G++ + + ++L+D+Y K +I +R+VF + +V W AMI G+A+ G EA VF M E +VS Sbjct: 120 VLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEM-EAEHVS 263
BLAST of CX671828 vs. ExPASy Swiss-Prot
Match: PP448_ARATH (Pentatricopeptide repeat-containing protein At5g66500, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E38 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.718e-11 Identity = 57/225 (25.33%), Postives = 106/225 (47.11%), Query Frame = 2 Query: 164 TLIKKC---KLQTHLHQVHSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTAVFNRI-VNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMPER------SNVSWNALIGGLVKIGDLRSARQLF 808 +++K C K+ QVH+ ++ G +D ++ + +S ++ + V+N + V+ + + N+L+ G +N + E F L+ P+ + CS + G I +R G D + L+D+YGK +I AR +F +P ++VVSWT+MI YA GD V+A +F M E ++V++ +I G ++ ++ F Sbjct: 190 SVVKTCASLKILQQGKQVHAMVVVTG--RDLVVLGTAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGCIRNRNYKEAF-----LLMSRQRPNVRVLSSSLAGCSDNSDLWIGKQIHCVALRNGFVSDSKLCNGLMDMYGKCGQIVQARTIFRAIPSKSVVSWTSMIDAYAVNGDGVKALEIFREMCEEGSGVLPNSVTFLVVISACAHAGLVKEGKECF 407
BLAST of CX671828 vs. ExPASy Swiss-Prot
Match: PP215_ARATH (Pentatricopeptide repeat-containing protein At3g05340 OS=Arabidopsis thaliana GN=PCMP-E83 PE=2 SV=2) HSP 1 Score: 67.781 bits (164), Expect = 8.284e-11 Identity = 53/232 (22.84%), Postives = 102/232 (43.97%), Query Frame = 2 Query: 134 PKPSCLLSALTLIKKCKLQTHLHQVHSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVG------DLVEAKTVFDLMPERSNVSWNALIGGLVKIGDLRSARQLFD 811 P LSAL + Q+H+ + K G+E + + + + + +S + + +F + +L G +QN E F+R+++ D V+ S+ G + + VI+ + FV LI++Y K +++ ++ VF MP+RN VSW +MI +A G L E T ++ P ++V++ +L+ +G + R+L + Sbjct: 254 PNSVTYLSALAACSGSQRIVEGQQIHALLWKYGIESELCIESALMDM-YSKCGSIEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMTTLEVKP--TDVTFLSLLHACSHVGLIDKGRELLN 482 The following BLAST results are available for this feature:
BLAST of CX671828 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 193
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX671828 ID=CX671828; Name=CX671828; organism=Citrus sinensis; type=EST; length=813bpback to top |