CX671828
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX671828 vs. ExPASy Swiss-Prot
Match: PP354_ARATH (Pentatricopeptide repeat-containing protein At4g37380, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H48 PE=2 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 9.740e-28 Identity = 76/233 (32.62%), Postives = 126/233 (54.08%), Query Frame = 2 Query: 116 SAPINFPKPSCLLSALTLIKKCKLQTHLHQVHSHIIKKGLEQDHSLVAHFISLCHSLAT--PLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMPERSNVSWNALIGGLVKIGDLRSARQLF 808 +A P P L LI K + + Q+H+ I++ L + L + A+ + +S A+F++ ++P+ FL+ + S N + F ++V+L+ E P+++TF ++K+CS + G I V+++G+ D +V T L+D+Y K ++ A+KVFD MPER++VS TAMI YA G++ A+ +FD M ER VSWN +I G + G A LF Sbjct: 21 TARFRLPPPEKLA---VLIDKSQSVDEVLQIHAAILRHNLLLHPRYPVLNLKLHRAYASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCS----TKSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLF 246 HSP 2 Score: 75.0998 bits (183), Expect = 5.188e-13 Identity = 53/218 (24.31%), Postives = 99/218 (45.41%), Query Frame = 2 Query: 164 TLIKKCKLQTHLHQVHSHIIKKGLEQDHSLVAHFISL------------------------------CHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIRE-EAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLM 724 +L+K C ++ +H+H++K GL D + + + C++ + + A+F+ + + WN ++ GY+Q+ + +F +L+ E + PD+ T + ACS + ++ G I V + +V V T LID+Y K + A VF++ P +++V+W AMI GYA G +A +F+ M Sbjct: 135 SLLKSCSTKSG-KLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEM 351
BLAST of CX671828 vs. ExPASy Swiss-Prot
Match: PP433_ARATH (Pentatricopeptide repeat-containing protein At5g56310 OS=Arabidopsis thaliana GN=PCMP-E13 PE=2 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.834e-27 Identity = 78/210 (37.14%), Postives = 115/210 (54.76%), Query Frame = 2 Query: 197 LHQVHSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYS----QNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMP--ERSNVSWNALIGGLVKIGDLRSARQLF 808 L Q H ++I GL +D+ VA FI C S A L Y+ +VF PNT+L NT+++ S N+ I + T++ +L A PD +TFP V+K V V G I V+ +G D V V T LI +Y + ARK+FDEM ++V W A++ GY VG++ EA+++ ++MP R+ VSW +I G K G A ++F Sbjct: 31 LKQSHCYMIITGLNRDNLNVAKFIEAC-SNAGHLRYAYSVFTHQPCPNTYLHNTMIRALSLLDEPNAHSIAI-TVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVF 238 HSP 2 Score: 85.5001 bits (210), Expect = 3.839e-16 Identity = 49/162 (30.25%), Postives = 89/162 (54.94%), Query Frame = 2 Query: 338 NTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMPER----SNVSWNALIGGLVKIGDLRSARQLFD 811 N W ++ GY+++ R E +F R++ E PD+ T V+ AC+ + S+ G I + V G++ V + ++ID+Y K I+ A VF+ + ERNVV+WT +I G A+ G EA +F+ M + ++V++ A++ +G + ++LF+ Sbjct: 214 NEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFN 375
BLAST of CX671828 vs. ExPASy Swiss-Prot
Match: PP385_ARATH (Pentatricopeptide repeat-containing protein At5g15300 OS=Arabidopsis thaliana GN=PCMP-E40 PE=2 SV=2) HSP 1 Score: 121.709 bits (304), Expect = 4.834e-27 Identity = 68/216 (31.48%), Postives = 119/216 (55.09%), Query Frame = 2 Query: 167 LIKKCKLQTHLHQVHSHIIKKGLEQDHSLVAHFI-SLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMPERSNVSWNALIGGLVKIGDLRSARQLFD 811 L + CK L Q+H+ ++ GL + S+V I S S+ L Y+ +F+ I P+ + N +L+G +Q+ + + +++ + + PD+YTF V+KACS + G A V+R G + +V +LI + ++ A ++FD+ + + V+W++M GYA G + EA +FD MP + V+WN +I G +K ++ SAR+LFD Sbjct: 18 LWQNCKNIRTLKQIHASMVVNGLMSNLSVVGELIYSASLSVPGALKYAHKLFDEIPKPDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRLFDEMPYKDQVAWNVMITGCLKCKEMDSARELFD 233
BLAST of CX671828 vs. ExPASy Swiss-Prot
Match: PPR70_ARATH (Pentatricopeptide repeat-containing protein At1g33350 OS=Arabidopsis thaliana GN=PCMP-E57 PE=2 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 6.313e-27 Identity = 76/218 (34.86%), Postives = 111/218 (50.92%), Query Frame = 2 Query: 167 LIKKCKLQTHLHQVHSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRF--IEVFTIFVRLI-REEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKR-KEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMPERSNVSWNALIGGLVKIGDLRSARQLF 808 +I K + HL QV S +I GL H L + C LSY+ +F+R PNT L+ +L YS + F+ F ++ R P+ + +PLV+K+ ++ S + + + G V V T+L+ Y I+ AR++FDEM ERNVVSWTAM+ GYA GD+ A +F+ MPER SWNA++ + G A LF Sbjct: 30 VISKSRHLNHLKQVQSFMIVSGLSHSHFLCFKLLRFCTLRLCNLSYARFIFDRFSFPNTHLYAAVLTAYSSSLPLHASSAFSFFRLMVNRSVPRPNHFIYPLVLKSTPYLSSAFSTPLVHTHLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDEMSERNVVSWTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLF 247 HSP 2 Score: 82.0333 bits (201), Expect = 4.244e-15 Identity = 59/208 (28.37%), Postives = 94/208 (45.19%), Query Frame = 2 Query: 206 VHSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTA---VFNRIVNPNTFLWNTLLKGYS-------------------------------QNSRFIEVFTIFVRLIREEAV-PDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLM 724 VH+H+ K G H V +L HS A+ +S+ T +F+ + N W +L GY+ QN F+E ++F R+I E ++ P++ T V+ AC+ +++ I A R + DVFV SL+DLYGK + A VF ++++ +W +MI +A G EA VF+ M Sbjct: 148 VHTHLFKSGF---HLYVVVQTALLHSYASSVSHITLARQLFDEMSERNVVSWTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEM 352
BLAST of CX671828 vs. ExPASy Swiss-Prot
Match: PP256_ARATH (Pentatricopeptide repeat-containing protein At3g26540 OS=Arabidopsis thaliana GN=PCMP-A5 PE=2 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 8.245e-27 Identity = 65/192 (33.85%), Postives = 105/192 (54.69%), Query Frame = 2 Query: 197 LHQVHSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMPERSNVSWNALIGGLV 772 L Q+H ++K G + L + + + +S + VF+ IVNP+ WN +++ Y + E +F +++ P +T V+ ACS L++ G I A ++ V D V TS+ D+Y K + AR+VFD+ +++ SWT+ + GYA G EA+ +FDLMPER+ VSWNA++GG V Sbjct: 181 LRQLHCAVVKYGYSGNVDLETSIVDV-YGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMPERNIVSWNAMLGGYV 371 HSP 2 Score: 77.7962 bits (190), Expect = 8.005e-14 Identity = 43/127 (33.86%), Postives = 73/127 (57.48%), Query Frame = 2 Query: 350 WNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMPE 730 WN ++ +QN EVF +F R+ R+ + +F V+K+C +L +R + AV+++G +V + TS++D+YGK + +S AR+VFDE+ + VSW ++ Y +G EA +F M E Sbjct: 130 WNAVITACAQNGVSDEVFRMFRRMNRDGVRATETSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLE 256 HSP 3 Score: 68.5514 bits (166), Expect = 4.856e-11 Identity = 44/139 (31.65%), Postives = 69/139 (49.64%), Query Frame = 2 Query: 314 VFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVP-DKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPE-RNVVSWTAMIVGYASVGDLVEAKTVFDLM 724 +F+ + N WN +L GY + E F+ L+R+E D T ++ CS + V+ G + R G D +V V +L+D+YGK + A F +M E R+ VSW A++ G A VG +A + F+ M Sbjct: 351 LFDLMPERNIVSWNAMLGGYVHAHEWDEALD-FLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVARVGRSEQALSFFEGM 488
BLAST of CX671828 vs. ExPASy Swiss-Prot
Match: PP210_ARATH (Pentatricopeptide repeat-containing protein At3g03580 OS=Arabidopsis thaliana GN=PCMP-H23 PE=2 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 8.245e-27 Identity = 63/175 (36.00%), Postives = 101/175 (57.71%), Query Frame = 2 Query: 197 LHQVHSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTAVFNRIVNP--NTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVF 715 L ++H+ +I GL+ I P S S +VF R V+P N +LWN++++ +S+N F E + +L + PDKYTFP VIKAC+ + G + ++ G + D+FVG +L+D+Y + ++ AR+VFDEMP R++VSW ++I GY+S G EA ++ Sbjct: 23 LRRIHALVISLGLDSSDFFSGKLIDKYSHFREPAS-SLSVFRR-VSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIY 195 HSP 2 Score: 82.4185 bits (202), Expect = 3.250e-15 Identity = 49/179 (27.37%), Postives = 93/179 (51.96%), Query Frame = 2 Query: 206 VHSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMPERSNV 742 +HS+ IK G+ D S+ I + ++ + S +F+ + +T WNT++ + F + ++ + E VPD TF + + C+ + + R G I ++R+G + ++ +G +LI++Y K + + +VF+ M R+VV+WT MI Y G+ +A F M E+S + Sbjct: 430 LHSNGIKSGICIDLSVSNALIDM-YAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADM-EKSGI 606 HSP 3 Score: 82.0333 bits (201), Expect = 4.244e-15 Identity = 51/170 (30.00%), Postives = 87/170 (51.18%), Query Frame = 2 Query: 206 VHSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVF 715 V+ I+ G E D V + + +S L+ + VF+ + + WN+L+ GYS + + E I+ L VPD +T V+ A ++L V++G + ++ GV+ V V L+ +Y K + + AR+VFDEM R+ VS+ MI GY + + E+ +F Sbjct: 128 VYEQILDMGFESD-LFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMF 296 HSP 4 Score: 70.4774 bits (171), Expect = 1.278e-11 Identity = 46/168 (27.38%), Postives = 87/168 (51.79%), Query Frame = 2 Query: 314 VFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLM----PERSNVSWNALIGGLVKIGDLRSARQL 805 VF+ + ++ +NT++ GY + E +F+ + ++ PD T V++AC H+ + I +++ G + V LID+Y K ++ AR VF+ M ++ VSW ++I GY GDL+EA +F +M + ++++ LI ++ DL+ + L Sbjct: 264 VFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENL-DQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGL 430 HSP 5 Score: 68.5514 bits (166), Expect = 4.856e-11 Identity = 38/162 (23.46%), Postives = 81/162 (50.00%), Query Frame = 2 Query: 206 VHSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGD 691 ++++++K G + S V + + ++ + + VFN + +T WN+++ GY Q+ +E +F ++ E D T+ ++I + + ++ G + + I+ G+ D+ V +LID+Y K E+ + K+F M + V+W +I GD Sbjct: 329 IYNYMLKAGFVLE-STVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGD 489
BLAST of CX671828 vs. ExPASy Swiss-Prot
Match: PP188_ARATH (Pentatricopeptide repeat-containing protein At2g36730 OS=Arabidopsis thaliana GN=PCMP-E44 PE=2 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 8.245e-27 Identity = 65/179 (36.31%), Postives = 97/179 (54.19%), Query Frame = 2 Query: 161 LTLIKKCKLQTHLHQVHSHIIKKGLEQDHSLVAHFISLCH-SLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDL 694 L +K C HL Q+H I L+ D +++ + + SLA L+++ + + WN L +GYS + +E ++ + R P+K TFP ++KAC+ L + G IQ V++ G D DV+VG +LI LYG K+ S ARKVFDEM ERNVVSW +++ G L Sbjct: 17 LIFLKLCSSIKHLLQIHGQIHLSSLQNDSFIISELVRVSSLSLAKDLAFARTLLLHSSDSTPSTWNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQIQVEVLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKL 195 HSP 2 Score: 87.8113 bits (216), Expect = 7.735e-17 Identity = 54/183 (29.51%), Postives = 95/183 (51.91%), Query Frame = 2 Query: 203 QVHSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMPERSNVSWN 751 Q+ ++K G + D + + I L + S + VF+ + N WN+++ +N + VF F +I + PD+ T +++ AC LS+ G + + V+ ++ + +GT+L+D+Y K + AR VF+ M ++NV +W+AMIVG A G EA +F M + S+V N Sbjct: 134 QIQVEVLKHGFDFDVYVGNNLIHL-YGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKLNLVFECFCEMIGKRFCPDETTMVVLLSACGGNLSL--GKLVHSQVMVRELELNCRLGTALVDMYAKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPN 313
BLAST of CX671828 vs. ExPASy Swiss-Prot
Match: PP169_ARATH (Pentatricopeptide repeat-containing protein At2g22410, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E28 PE=2 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 8.245e-27 Identity = 79/268 (29.48%), Postives = 134/268 (50.00%), Query Frame = 2 Query: 59 PNTPCKHKSCSSMLPNCSRSAPINFPKPSCLLSA---------LTLIKKCKLQTHLHQVHSHIIKKGLEQDHSLVAHFISLCH-SLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIRE---EAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMPER----SNVSWNALIGGLVKIGDLRSARQLFD 811 P TP ++S S +RS P + KP S L+L++KCKL HL Q+ + +I GL D + I+ C S + L YS + I NPN F WN ++G+S++ E F ++ +++R E+ PD +T+P++ K C+ + G I V++ ++ V + I ++ ++ ARKVFDE P R++VSW +I GY +G+ +A V+ LM +V+ L+ +GDL ++ ++ Sbjct: 14 PLTPKLNRSLYSHSQRRTRSLPHHRDKPINWNSTHSFVLHNPLLSLLEKCKLLLHLKQIQAQMIINGLILDPFASSRLIAFCALSESRYLDYSVKILKGIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYE 281 HSP 2 Score: 97.4413 bits (241), Expect = 9.762e-20 Identity = 68/240 (28.33%), Postives = 111/240 (46.25%), Query Frame = 2 Query: 107 CSRSAPINFPKPSCLLSALTLIKKC---KLQTHLHQVHSHIIKKGLE---QDHSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMPERSNVSWNALIGGLVKIGDLRSARQLF 808 C S P +F P L K C +L + H + H++K LE H+ H + C + + VF+ + WN L+ GY + + ++ + E PD T ++ +CS + + G V G+ + + +L+D++ K +I AR++FD + +R +VSWT MI GYA G L ++ +FD M E+ V WNA+IGG V+ + A LF Sbjct: 149 CCESRPDHFTYP-------VLFKVCADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMEN----ARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALF 377 HSP 3 Score: 70.0922 bits (170), Expect = 1.669e-11 Identity = 47/175 (26.86%), Postives = 84/175 (48.00%), Query Frame = 2 Query: 296 LSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMPER----SNVSWNALIGGLVKIGDLRSARQLF 808 L S +F+ + + LWN ++ G Q R + +F + PD+ T + ACS + ++ G I + ++ + +V +GTSL+D+Y K IS A VF + RN +++TA+I G A GD A + F+ M + +++ L+ G +++ R F Sbjct: 339 LDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYF 513
BLAST of CX671828 vs. ExPASy Swiss-Prot
Match: PP212_ARATH (Pentatricopeptide repeat-containing protein At3g04750, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E81 PE=2 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 1.077e-26 Identity = 68/224 (30.36%), Postives = 121/224 (54.02%), Query Frame = 2 Query: 161 LTLIKKCKLQTHLHQVHSHIIKKGLEQD-----HSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWG--VDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMPERSNVSWNALIGGLVKIG-DLRSARQLF 808 L L+K + + Q+H HII G +SLV ++ L + + VF R+ +P+ +N ++ GY++ +E ++ +++ + PD+YT ++ C H+ +R G + + R G ++ + +L+D+Y K KE A++ FD M ++++ SW M+VG+ +GD+ A+ VFD MP+R VSWN+L+ G K G D R+ R+LF Sbjct: 137 LYLMKASSFLSEVKQIHCHIIVSGCLSLGNYLWNSLVKFYMELGN-----FGVAEKVFARMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELF 355 HSP 2 Score: 70.8626 bits (172), Expect = 9.785e-12 Identity = 61/219 (27.85%), Postives = 101/219 (46.12%), Query Frame = 2 Query: 158 ALTLIKKCKLQTHLHQVHSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTA---VFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWG-VDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEA-KTVFDLMPERSNVSWNALIGGLVKIGDLRSAR 799 +L L++ C + QV + I++ L D ++ I ++ P + A N NPN F++NT++ S + E F ++ +IR PD+ TF ++KA S + V++ I +I G + ++ SL+ Y + A KVF MP +V S+ MIVGYA G +EA K F ++ + ++ LV G L R Sbjct: 37 SLVLLENCNSRNQFKQVLAQIMRFNLICDTFPMSRLIFFS-AITYPENLDLAKLLFLNFTPNPNVFVYNTMISAVSSSKN--ECFGLYSSMIRHRVSPDRQTFLYLMKASSFLSEVKQ---IHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIR 249 HSP 3 Score: 70.0922 bits (170), Expect = 1.669e-11 Identity = 63/220 (28.64%), Postives = 106/220 (48.18%), Query Frame = 2 Query: 161 LTLIKKCKLQTHLHQVHSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQ---NSRFI-EVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMPER----SNVSWNALI-----GGLVKIG 781 L + KCK + + KK + +++V F+ L + + AVF+++ + WN+LL GYS+ + R + E+F + I E+ PD+ T +I ++ + G + VIR + D F+ ++LID+Y K I A VF E++V WT+MI G A G+ +A +F M E +NV+ A++ GLV+ G Sbjct: 276 LDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRL-----GDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELF--YEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEG 488
BLAST of CX671828 vs. ExPASy Swiss-Prot
Match: PP441_ARATH (Pentatricopeptide repeat-containing protein At5g61800 OS=Arabidopsis thaliana GN=PCMP-E8 PE=2 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.406e-26 Identity = 74/232 (31.90%), Postives = 122/232 (52.59%), Query Frame = 2 Query: 167 LIKKCKLQTHLHQVHSHIIKKG-LEQDHSLVAHFISLCHSLAT----------PLSYSTAVFNRIVNPNTFLWNTLLKGYSQNS-RFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGT-----AIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMPERSNVSWNALIGGLVKIGDLRSARQLFD 811 L+K C+ HLHQ H+ I G + D + F ++ ++ + +SY+T+VF I NP+TF +NT+++ + + + FV + R PD +TFP V KAC+ + + G + +R+G+ D+F +LI +Y I A ++FDE P+R+VV++ +I G ++V A+ +FD MP R VSWN+LI G ++ R A +LFD Sbjct: 10 LLKLCRTLKHLHQFHAQFITSGRISNDFKQNSVFANVLFAITSISPSASASKEVVSYATSVFRFITNPSTFCFNTIIRICTLHEPSSLSSKRFFVEMRRRSVPPDFHTFPFVFKACA---AKKNGDLTLVKTLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQLFDENPQRDVVTYNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFD 238 The following BLAST results are available for this feature:
BLAST of CX671828 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 193
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Sequences
The
following sequences are available for this feature:
EST sequence >CX671828 ID=CX671828; Name=CX671828; organism=Citrus sinensis; type=EST; length=813bpback to top |