CX671828

Overview
NameCX671828
Unique NameCX671828
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length813
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671828 vs. ExPASy Swiss-Prot
Match: PP354_ARATH (Pentatricopeptide repeat-containing protein At4g37380, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H48 PE=2 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 9.740e-28
Identity = 76/233 (32.62%), Postives = 126/233 (54.08%), Query Frame = 2
Query:  116 SAPINFPKPSCLLSALTLIKKCKLQTHLHQVHSHIIKKGLEQDHSLVAHFISLCHSLAT--PLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMPERSNVSWNALIGGLVKIGDLRSARQLF 808
            +A    P P  L     LI K +    + Q+H+ I++  L          + L  + A+   + +S A+F++ ++P+ FL+   +   S N    + F ++V+L+  E  P+++TF  ++K+CS     + G  I   V+++G+  D +V T L+D+Y K  ++  A+KVFD MPER++VS TAMI  YA  G++  A+ +FD M ER  VSWN +I G  + G    A  LF
Sbjct:   21 TARFRLPPPEKLA---VLIDKSQSVDEVLQIHAAILRHNLLLHPRYPVLNLKLHRAYASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCS----TKSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLF 246          

HSP 2 Score: 75.0998 bits (183), Expect = 5.188e-13
Identity = 53/218 (24.31%), Postives = 99/218 (45.41%), Query Frame = 2
Query:  164 TLIKKCKLQTHLHQVHSHIIKKGLEQDHSLVAHFISL------------------------------CHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIRE-EAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLM 724
            +L+K C  ++    +H+H++K GL  D  +    + +                              C++    +  + A+F+ +   +   WN ++ GY+Q+    +   +F +L+ E +  PD+ T    + ACS + ++  G  I   V    +  +V V T LID+Y K   +  A  VF++ P +++V+W AMI GYA  G   +A  +F+ M
Sbjct:  135 SLLKSCSTKSG-KLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEM 351          
BLAST of CX671828 vs. ExPASy Swiss-Prot
Match: PP433_ARATH (Pentatricopeptide repeat-containing protein At5g56310 OS=Arabidopsis thaliana GN=PCMP-E13 PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 2.834e-27
Identity = 78/210 (37.14%), Postives = 115/210 (54.76%), Query Frame = 2
Query:  197 LHQVHSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYS----QNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMP--ERSNVSWNALIGGLVKIGDLRSARQLF 808
            L Q H ++I  GL +D+  VA FI  C S A  L Y+ +VF     PNT+L NT+++  S     N+  I + T++ +L    A PD +TFP V+K    V  V  G  I   V+ +G D  V V T LI +Y     +  ARK+FDEM  ++V  W A++ GY  VG++ EA+++ ++MP   R+ VSW  +I G  K G    A ++F
Sbjct:   31 LKQSHCYMIITGLNRDNLNVAKFIEAC-SNAGHLRYAYSVFTHQPCPNTYLHNTMIRALSLLDEPNAHSIAI-TVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVF 238          

HSP 2 Score: 85.5001 bits (210), Expect = 3.839e-16
Identity = 49/162 (30.25%), Postives = 89/162 (54.94%), Query Frame = 2
Query:  338 NTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMPER----SNVSWNALIGGLVKIGDLRSARQLFD 811
            N   W  ++ GY+++ R  E   +F R++ E   PD+ T   V+ AC+ + S+  G  I + V   G++  V +  ++ID+Y K   I+ A  VF+ + ERNVV+WT +I G A+ G   EA  +F+ M +     ++V++ A++     +G +   ++LF+
Sbjct:  214 NEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFN 375          
BLAST of CX671828 vs. ExPASy Swiss-Prot
Match: PP385_ARATH (Pentatricopeptide repeat-containing protein At5g15300 OS=Arabidopsis thaliana GN=PCMP-E40 PE=2 SV=2)

HSP 1 Score: 121.709 bits (304), Expect = 4.834e-27
Identity = 68/216 (31.48%), Postives = 119/216 (55.09%), Query Frame = 2
Query:  167 LIKKCKLQTHLHQVHSHIIKKGLEQDHSLVAHFI-SLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMPERSNVSWNALIGGLVKIGDLRSARQLFD 811
            L + CK    L Q+H+ ++  GL  + S+V   I S   S+   L Y+  +F+ I  P+  + N +L+G +Q+ +  +  +++  + +    PD+YTF  V+KACS +     G A    V+R G   + +V  +LI  +    ++  A ++FD+  + + V+W++M  GYA  G + EA  +FD MP +  V+WN +I G +K  ++ SAR+LFD
Sbjct:   18 LWQNCKNIRTLKQIHASMVVNGLMSNLSVVGELIYSASLSVPGALKYAHKLFDEIPKPDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRLFDEMPYKDQVAWNVMITGCLKCKEMDSARELFD 233          
BLAST of CX671828 vs. ExPASy Swiss-Prot
Match: PPR70_ARATH (Pentatricopeptide repeat-containing protein At1g33350 OS=Arabidopsis thaliana GN=PCMP-E57 PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 6.313e-27
Identity = 76/218 (34.86%), Postives = 111/218 (50.92%), Query Frame = 2
Query:  167 LIKKCKLQTHLHQVHSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRF--IEVFTIFVRLI-REEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKR-KEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMPERSNVSWNALIGGLVKIGDLRSARQLF 808
            +I K +   HL QV S +I  GL   H L    +  C      LSY+  +F+R   PNT L+  +L  YS +        F+ F  ++ R    P+ + +PLV+K+  ++ S      +   + + G    V V T+L+  Y      I+ AR++FDEM ERNVVSWTAM+ GYA  GD+  A  +F+ MPER   SWNA++    + G    A  LF
Sbjct:   30 VISKSRHLNHLKQVQSFMIVSGLSHSHFLCFKLLRFCTLRLCNLSYARFIFDRFSFPNTHLYAAVLTAYSSSLPLHASSAFSFFRLMVNRSVPRPNHFIYPLVLKSTPYLSSAFSTPLVHTHLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDEMSERNVVSWTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLF 247          

HSP 2 Score: 82.0333 bits (201), Expect = 4.244e-15
Identity = 59/208 (28.37%), Postives = 94/208 (45.19%), Query Frame = 2
Query:  206 VHSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTA---VFNRIVNPNTFLWNTLLKGYS-------------------------------QNSRFIEVFTIFVRLIREEAV-PDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLM 724
            VH+H+ K G    H  V    +L HS A+ +S+ T    +F+ +   N   W  +L GY+                               QN  F+E  ++F R+I E ++ P++ T   V+ AC+   +++    I A   R  +  DVFV  SL+DLYGK   +  A  VF    ++++ +W +MI  +A  G   EA  VF+ M
Sbjct:  148 VHTHLFKSGF---HLYVVVQTALLHSYASSVSHITLARQLFDEMSERNVVSWTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEM 352          
BLAST of CX671828 vs. ExPASy Swiss-Prot
Match: PP256_ARATH (Pentatricopeptide repeat-containing protein At3g26540 OS=Arabidopsis thaliana GN=PCMP-A5 PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 8.245e-27
Identity = 65/192 (33.85%), Postives = 105/192 (54.69%), Query Frame = 2
Query:  197 LHQVHSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMPERSNVSWNALIGGLV 772
            L Q+H  ++K G   +  L    + + +     +S +  VF+ IVNP+   WN +++ Y +     E   +F +++     P  +T   V+ ACS  L++  G  I A  ++  V  D  V TS+ D+Y K   +  AR+VFD+   +++ SWT+ + GYA  G   EA+ +FDLMPER+ VSWNA++GG V
Sbjct:  181 LRQLHCAVVKYGYSGNVDLETSIVDV-YGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMPERNIVSWNAMLGGYV 371          

HSP 2 Score: 77.7962 bits (190), Expect = 8.005e-14
Identity = 43/127 (33.86%), Postives = 73/127 (57.48%), Query Frame = 2
Query:  350 WNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMPE 730
            WN ++   +QN    EVF +F R+ R+     + +F  V+K+C  +L +R    +  AV+++G   +V + TS++D+YGK + +S AR+VFDE+   + VSW  ++  Y  +G   EA  +F  M E
Sbjct:  130 WNAVITACAQNGVSDEVFRMFRRMNRDGVRATETSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLE 256          

HSP 3 Score: 68.5514 bits (166), Expect = 4.856e-11
Identity = 44/139 (31.65%), Postives = 69/139 (49.64%), Query Frame = 2
Query:  314 VFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVP-DKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPE-RNVVSWTAMIVGYASVGDLVEAKTVFDLM 724
            +F+ +   N   WN +L GY     + E    F+ L+R+E    D  T   ++  CS +  V+ G      + R G D +V V  +L+D+YGK   +  A   F +M E R+ VSW A++ G A VG   +A + F+ M
Sbjct:  351 LFDLMPERNIVSWNAMLGGYVHAHEWDEALD-FLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVARVGRSEQALSFFEGM 488          
BLAST of CX671828 vs. ExPASy Swiss-Prot
Match: PP210_ARATH (Pentatricopeptide repeat-containing protein At3g03580 OS=Arabidopsis thaliana GN=PCMP-H23 PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 8.245e-27
Identity = 63/175 (36.00%), Postives = 101/175 (57.71%), Query Frame = 2
Query:  197 LHQVHSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTAVFNRIVNP--NTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVF 715
            L ++H+ +I  GL+         I        P S S +VF R V+P  N +LWN++++ +S+N  F E    + +L   +  PDKYTFP VIKAC+ +     G  +   ++  G + D+FVG +L+D+Y +   ++ AR+VFDEMP R++VSW ++I GY+S G   EA  ++
Sbjct:   23 LRRIHALVISLGLDSSDFFSGKLIDKYSHFREPAS-SLSVFRR-VSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIY 195          

HSP 2 Score: 82.4185 bits (202), Expect = 3.250e-15
Identity = 49/179 (27.37%), Postives = 93/179 (51.96%), Query Frame = 2
Query:  206 VHSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMPERSNV 742
            +HS+ IK G+  D S+    I + ++    +  S  +F+ +   +T  WNT++    +   F     +  ++ + E VPD  TF + +  C+ + + R G  I   ++R+G + ++ +G +LI++Y K   +  + +VF+ M  R+VV+WT MI  Y   G+  +A   F  M E+S +
Sbjct:  430 LHSNGIKSGICIDLSVSNALIDM-YAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADM-EKSGI 606          

HSP 3 Score: 82.0333 bits (201), Expect = 4.244e-15
Identity = 51/170 (30.00%), Postives = 87/170 (51.18%), Query Frame = 2
Query:  206 VHSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVF 715
            V+  I+  G E D   V + +   +S    L+ +  VF+ +   +   WN+L+ GYS +  + E   I+  L     VPD +T   V+ A  ++L V++G  +    ++ GV+  V V   L+ +Y K +  + AR+VFDEM  R+ VS+  MI GY  +  + E+  +F
Sbjct:  128 VYEQILDMGFESD-LFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMF 296          

HSP 4 Score: 70.4774 bits (171), Expect = 1.278e-11
Identity = 46/168 (27.38%), Postives = 87/168 (51.79%), Query Frame = 2
Query:  314 VFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLM----PERSNVSWNALIGGLVKIGDLRSARQL 805
            VF+ +   ++  +NT++ GY +     E   +F+  + ++  PD  T   V++AC H+  +     I   +++ G   +  V   LID+Y K  ++  AR VF+ M  ++ VSW ++I GY   GDL+EA  +F +M     +  ++++  LI    ++ DL+  + L
Sbjct:  264 VFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENL-DQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGL 430          

HSP 5 Score: 68.5514 bits (166), Expect = 4.856e-11
Identity = 38/162 (23.46%), Postives = 81/162 (50.00%), Query Frame = 2
Query:  206 VHSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGD 691
            ++++++K G   + S V + +   ++    +  +  VFN +   +T  WN+++ GY Q+   +E   +F  ++  E   D  T+ ++I   + +  ++ G  + +  I+ G+  D+ V  +LID+Y K  E+  + K+F  M   + V+W  +I      GD
Sbjct:  329 IYNYMLKAGFVLE-STVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGD 489          
BLAST of CX671828 vs. ExPASy Swiss-Prot
Match: PP188_ARATH (Pentatricopeptide repeat-containing protein At2g36730 OS=Arabidopsis thaliana GN=PCMP-E44 PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 8.245e-27
Identity = 65/179 (36.31%), Postives = 97/179 (54.19%), Query Frame = 2
Query:  161 LTLIKKCKLQTHLHQVHSHIIKKGLEQDHSLVAHFISLCH-SLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDL 694
            L  +K C    HL Q+H  I    L+ D  +++  + +   SLA  L+++  +     +     WN L +GYS +   +E   ++  + R    P+K TFP ++KAC+  L +  G  IQ  V++ G D DV+VG +LI LYG  K+ S ARKVFDEM ERNVVSW +++      G L
Sbjct:   17 LIFLKLCSSIKHLLQIHGQIHLSSLQNDSFIISELVRVSSLSLAKDLAFARTLLLHSSDSTPSTWNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQIQVEVLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKL 195          

HSP 2 Score: 87.8113 bits (216), Expect = 7.735e-17
Identity = 54/183 (29.51%), Postives = 95/183 (51.91%), Query Frame = 2
Query:  203 QVHSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMPERSNVSWN 751
            Q+   ++K G + D  +  + I L +      S +  VF+ +   N   WN+++    +N +   VF  F  +I +   PD+ T  +++ AC   LS+  G  + + V+   ++ +  +GT+L+D+Y K   +  AR VF+ M ++NV +W+AMIVG A  G   EA  +F  M + S+V  N
Sbjct:  134 QIQVEVLKHGFDFDVYVGNNLIHL-YGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKLNLVFECFCEMIGKRFCPDETTMVVLLSACGGNLSL--GKLVHSQVMVRELELNCRLGTALVDMYAKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPN 313          
BLAST of CX671828 vs. ExPASy Swiss-Prot
Match: PP169_ARATH (Pentatricopeptide repeat-containing protein At2g22410, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E28 PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 8.245e-27
Identity = 79/268 (29.48%), Postives = 134/268 (50.00%), Query Frame = 2
Query:   59 PNTPCKHKSCSSMLPNCSRSAPINFPKPSCLLSA---------LTLIKKCKLQTHLHQVHSHIIKKGLEQDHSLVAHFISLCH-SLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIRE---EAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMPER----SNVSWNALIGGLVKIGDLRSARQLFD 811
            P TP  ++S  S     +RS P +  KP    S          L+L++KCKL  HL Q+ + +I  GL  D    +  I+ C  S +  L YS  +   I NPN F WN  ++G+S++    E F ++ +++R    E+ PD +T+P++ K C+ +     G  I   V++  ++    V  + I ++    ++  ARKVFDE P R++VSW  +I GY  +G+  +A  V+ LM        +V+   L+     +GDL   ++ ++
Sbjct:   14 PLTPKLNRSLYSHSQRRTRSLPHHRDKPINWNSTHSFVLHNPLLSLLEKCKLLLHLKQIQAQMIINGLILDPFASSRLIAFCALSESRYLDYSVKILKGIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYE 281          

HSP 2 Score: 97.4413 bits (241), Expect = 9.762e-20
Identity = 68/240 (28.33%), Postives = 111/240 (46.25%), Query Frame = 2
Query:  107 CSRSAPINFPKPSCLLSALTLIKKC---KLQTHLHQVHSHIIKKGLE---QDHSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMPERSNVSWNALIGGLVKIGDLRSARQLF 808
            C  S P +F  P        L K C   +L +  H +  H++K  LE     H+   H  + C  +      +  VF+     +   WN L+ GY +     +   ++  +  E   PD  T   ++ +CS +  +  G      V   G+   + +  +L+D++ K  +I  AR++FD + +R +VSWT MI GYA  G L  ++ +FD M E+  V WNA+IGG V+    + A  LF
Sbjct:  149 CCESRPDHFTYP-------VLFKVCADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMEN----ARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALF 377          

HSP 3 Score: 70.0922 bits (170), Expect = 1.669e-11
Identity = 47/175 (26.86%), Postives = 84/175 (48.00%), Query Frame = 2
Query:  296 LSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMPER----SNVSWNALIGGLVKIGDLRSARQLF 808
            L  S  +F+ +   +  LWN ++ G  Q  R  +   +F  +      PD+ T    + ACS + ++  G  I   + ++ +  +V +GTSL+D+Y K   IS A  VF  +  RN +++TA+I G A  GD   A + F+ M +       +++  L+      G +++ R  F
Sbjct:  339 LDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYF 513          
BLAST of CX671828 vs. ExPASy Swiss-Prot
Match: PP212_ARATH (Pentatricopeptide repeat-containing protein At3g04750, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E81 PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 1.077e-26
Identity = 68/224 (30.36%), Postives = 121/224 (54.02%), Query Frame = 2
Query:  161 LTLIKKCKLQTHLHQVHSHIIKKGLEQD-----HSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWG--VDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMPERSNVSWNALIGGLVKIG-DLRSARQLF 808
            L L+K     + + Q+H HII  G         +SLV  ++ L +        +  VF R+ +P+   +N ++ GY++    +E   ++ +++ +   PD+YT   ++  C H+  +R G  +   + R G     ++ +  +L+D+Y K KE   A++ FD M ++++ SW  M+VG+  +GD+  A+ VFD MP+R  VSWN+L+ G  K G D R+ R+LF
Sbjct:  137 LYLMKASSFLSEVKQIHCHIIVSGCLSLGNYLWNSLVKFYMELGN-----FGVAEKVFARMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELF 355          

HSP 2 Score: 70.8626 bits (172), Expect = 9.785e-12
Identity = 61/219 (27.85%), Postives = 101/219 (46.12%), Query Frame = 2
Query:  158 ALTLIKKCKLQTHLHQVHSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTA---VFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWG-VDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEA-KTVFDLMPERSNVSWNALIGGLVKIGDLRSAR 799
            +L L++ C  +    QV + I++  L  D   ++  I    ++  P +   A     N   NPN F++NT++   S +    E F ++  +IR    PD+ TF  ++KA S +  V++   I   +I  G +    ++  SL+  Y +      A KVF  MP  +V S+  MIVGYA  G  +EA K  F ++ +        ++  LV  G L   R
Sbjct:   37 SLVLLENCNSRNQFKQVLAQIMRFNLICDTFPMSRLIFFS-AITYPENLDLAKLLFLNFTPNPNVFVYNTMISAVSSSKN--ECFGLYSSMIRHRVSPDRQTFLYLMKASSFLSEVKQ---IHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIR 249          

HSP 3 Score: 70.0922 bits (170), Expect = 1.669e-11
Identity = 63/220 (28.64%), Postives = 106/220 (48.18%), Query Frame = 2
Query:  161 LTLIKKCKLQTHLHQVHSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQ---NSRFI-EVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMPER----SNVSWNALI-----GGLVKIG 781
            L +  KCK      +    + KK +   +++V  F+ L       +  + AVF+++   +   WN+LL GYS+   + R + E+F  +   I E+  PD+ T   +I   ++   +  G  +   VIR  +  D F+ ++LID+Y K   I  A  VF    E++V  WT+MI G A  G+  +A  +F  M E     +NV+  A++      GLV+ G
Sbjct:  276 LDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRL-----GDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELF--YEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEG 488          
BLAST of CX671828 vs. ExPASy Swiss-Prot
Match: PP441_ARATH (Pentatricopeptide repeat-containing protein At5g61800 OS=Arabidopsis thaliana GN=PCMP-E8 PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.406e-26
Identity = 74/232 (31.90%), Postives = 122/232 (52.59%), Query Frame = 2
Query:  167 LIKKCKLQTHLHQVHSHIIKKG-LEQDHSLVAHFISLCHSLAT----------PLSYSTAVFNRIVNPNTFLWNTLLKGYSQNS-RFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGT-----AIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMPERSNVSWNALIGGLVKIGDLRSARQLFD 811
            L+K C+   HLHQ H+  I  G +  D    + F ++  ++ +           +SY+T+VF  I NP+TF +NT+++  + +    +     FV + R    PD +TFP V KAC+   + + G       +    +R+G+  D+F   +LI +Y     I  A ++FDE P+R+VV++  +I G     ++V A+ +FD MP R  VSWN+LI G  ++   R A +LFD
Sbjct:   10 LLKLCRTLKHLHQFHAQFITSGRISNDFKQNSVFANVLFAITSISPSASASKEVVSYATSVFRFITNPSTFCFNTIIRICTLHEPSSLSSKRFFVEMRRRSVPPDFHTFPFVFKACA---AKKNGDLTLVKTLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQLFDENPQRDVVTYNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFD 238          
The following BLAST results are available for this feature:
BLAST of CX671828 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 193
Match NameE-valueIdentityDescription
PP354_ARATH9.740e-2832.62Pentatricopeptide repeat-containing protein At4g37... [more]
PP433_ARATH2.834e-2737.14Pentatricopeptide repeat-containing protein At5g56... [more]
PP385_ARATH4.834e-2731.48Pentatricopeptide repeat-containing protein At5g15... [more]
PPR70_ARATH6.313e-2734.86Pentatricopeptide repeat-containing protein At1g33... [more]
PP256_ARATH8.245e-2733.85Pentatricopeptide repeat-containing protein At3g26... [more]
PP210_ARATH8.245e-2736.00Pentatricopeptide repeat-containing protein At3g03... [more]
PP188_ARATH8.245e-2736.31Pentatricopeptide repeat-containing protein At2g36... [more]
PP169_ARATH8.245e-2729.48Pentatricopeptide repeat-containing protein At2g22... [more]
PP212_ARATH1.077e-2630.36Pentatricopeptide repeat-containing protein At3g04... [more]
PP441_ARATH1.406e-2631.90Pentatricopeptide repeat-containing protein At5g61... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_13D05_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-13D05-G9-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671828 ID=CX671828; Name=CX671828; organism=Citrus sinensis; type=EST; length=813bp
GGACAGTGGGCAACTATCCCGCGAGGGAGAGCTAACTCCAATGCCCAAAA
TTGACGAACCAAACACGCCATGCAAGCACAAGTCCTGCTCTTCGATGCTA
CCTAACTGCTCACGATCAGCGCCCATCAACTTCCCAAAACCATCGTGTCT
CCTTTCCGCTTTAACCCTGATAAAGAAGTGCAAACTCCAAACTCACCTCC
ACCAGGTTCACTCTCACATCATCAAAAAGGGCCTCGAGCAAGATCACTCT
CTCGTTGCCCACTTCATCTCGCTGTGTCACTCCCTCGCCACTCCCTTATC
TTACTCTACCGCCGTCTTCAACCGCATTGTCAATCCCAATACTTTTCTTT
GGAACACCCTCTTAAAAGGGTACTCTCAGAATTCTCGTTTTATTGAGGTT
TTTACGATTTTTGTTCGATTGATTAGAGAGGAAGCGGTGCCTGATAAGTA
TACGTTCCCATTGGTAATTAAGGCGTGTTCGCATGTGCTTAGTGTGAGGG
AAGGAACGGCGATTCAAGCTGCTGTAATTAGGTGGGGGGTTGATGAGGAT
GTGTTTGTGGGAACTAGTTTGATTGACTTATATGGGAAACGTAAAGAGAT
TTCTTGCGCCCGTAAAGTGTTCGATGAAATGCCTGAGAGAAATGTTGTTT
CATGGACAGCGATGATTGTTGGATATGCGAGTGTTGGGGATTTGGTGGAA
GCGAAGACGGTTTTTGATTTAATGCCGGAGAGGAGTAATGTTTCATGGAA
TGCTTTGATTGGGGGGTTAGTGAAGATAGGAGATTTGAGAAGTGCTAGGC
AGTTGTTTGATGA
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