CX671828

Overview
NameCX671828
Unique NameCX671828
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length813
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5099 contig Csv1_Contig5099:1..813. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX671828 vs. ExPASy Swiss-Prot
Match: PP336_ARATH (Pentatricopeptide repeat-containing protein At4g22765 OS=Arabidopsis thaliana GN=PCMP-E6 PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 8.532e-24
Identity = 59/215 (27.44%), Postives = 110/215 (51.16%), Query Frame = 2
Query:  170 IKKCKLQTHLHQVHSHIIKKGLEQDHSLVAH-FISLCHSLATPL-SYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMPERSNVSWNALIGGLVKIGDLRSARQLF 808
            +++C +     QVH+ ++         ++ H  +      +  + +Y   +       ++F W  L++  SQ+ +F E   +++ +      P  +    V++AC  + ++ +G  I A  ++ G+   V+V T L+ LY +   I  A+K FD++ E+N VSW +++ GY   G+L EA+ VFD +PE+  VSWN +I    K GD+ +A  LF
Sbjct:   10 LQRCVVLEQAKQVHAQLVVNRYNHLEPILVHQTLHFTKEFSRNIVTYVKRILKGFNGHDSFSWGCLVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRACGKMENMVDGKPIHAQALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGELDEARRVFDKIPEKDAVSWNLIISSYAKKGDMGNACSLF 224          

HSP 2 Score: 77.0258 bits (188), Expect = 1.365e-13
Identity = 58/230 (25.22%), Postives = 104/230 (45.22%), Query Frame = 2
Query:  134 PKPSCLLSALTLIKKCKLQTHLHQVHSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAV-----IRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMPERSNVSWNALIGGLVKIGDLRSARQLF 808
            P    + S L    K +       +H+  +K GL     +    + L   L   +  +   F+ I   NT  WN+LL GY ++    E   +F ++  ++AV    ++ L+I + +    +    ++ +A+       W +         LI  Y   +E+  AR  FD MP++N VSW  MI GY  +GD+  A+ +F LM ++  + ++A+I    + G  + A +LF
Sbjct:  102 PSSHAVTSVLRACGKMENMVDGKPIHAQALKNGLCGCVYVQTGLVGLYSRLGY-IELAKKAFDDIAEKNTVSWNSLLHGYLESGELDEARRVFDKIPEKDAV----SWNLIISSYAKKGDMGNACSLFSAMPLKSPASWNI---------LIGGYVNCREMKLARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEELFRLMSKKDKLVYDAMIACYTQNGKPKDALKLF 317          
BLAST of CX671828 vs. ExPASy Swiss-Prot
Match: PP410_ARATH (Putative pentatricopeptide repeat-containing protein At5g40405 OS=Arabidopsis thaliana GN=PCMP-H14 PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.455e-23
Identity = 62/207 (29.95%), Postives = 108/207 (52.17%), Query Frame = 2
Query:  197 LHQVHSHIIKKGLEQDHSLVAHFI-SLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIRE--EAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMPERSNVSWNALIGGLVKIGDLRSARQLF 808
            + Q+H+ +   G  +D  LV HF+ ++  S    L Y+  + +R   P  F  N++++ + ++    + F  + R++    +  PD YT   +++AC+ +     G  +    IR G D D  V T LI LY +   +    KVF+ +P  + V  TAM+   A  GD+V A+ +F+ MPER  ++WNA+I G  ++G+ R A  +F
Sbjct:   22 VRQIHAKLYVDGTLKDDHLVGHFVKAVALSDHKYLDYANQILDRSEKPTLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVF 228          
BLAST of CX671828 vs. ExPASy Swiss-Prot
Match: PP219_ARATH (Putative pentatricopeptide repeat-containing protein At3g08820 OS=Arabidopsis thaliana GN=PCMP-H84 PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.455e-23
Identity = 69/214 (32.24%), Postives = 107/214 (50.00%), Query Frame = 2
Query:  164 TLIKKCKLQTHLHQVHSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMPER----SNVSWNALIGGLVKIGDLRS 793
            TLI       HL Q+H  +I   L  D  LV   +           YS  +F+    PN FL+N+L+ G+  N  F E   +F+ + +       +TFPLV+KAC+   S + G  + + V++ G + DV   TSL+ +Y     ++ A K+FDE+P+R+VV+WTA+  GY + G   EA  +F  M E      +     ++   V +GDL S
Sbjct:   18 TLISVACTVNHLKQIHVSLINHHLHHDTFLVNLLLKRT-LFFRQTKYSYLLFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDS 230          

HSP 2 Score: 90.5077 bits (223), Expect = 1.193e-17
Identity = 54/178 (30.34%), Postives = 92/178 (51.69%), Query Frame = 2
Query:  149 LLSALTLIKKCKLQTHLHQVHSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYAS 682
            +L A T     KL   LH +   ++K G   D + +   +S+ +S +  L+ +  +F+ I + +   W  L  GY+ + R  E   +F +++     PD Y    V+ AC HV  +  G  I   +    + ++ FV T+L++LY K  ++  AR VFD M E+++V+W+ MI GYAS
Sbjct:  117 VLKACTRASSRKLGIDLHSL---VVKCGFNHDVAAMTSLLSI-YSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYAS 290          
BLAST of CX671828 vs. ExPASy Swiss-Prot
Match: PP202_ARATH (Pentatricopeptide repeat-containing protein At2g45350, chloroplastic OS=Arabidopsis thaliana GN=CRR4 PE=2 SV=2)

HSP 1 Score: 110.153 bits (274), Expect = 1.455e-23
Identity = 66/222 (29.73%), Postives = 112/222 (50.45%), Query Frame = 2
Query:  155 SALTLIKKCKLQTHLHQVHSHIIKKGLEQDHSLVAHFISLCHSLATPL----------SYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMP-ERSN-VSWNALIGGLVKIGD 784
            S + ++  CK    ++Q+H  +IK G+ ++ +L    +    S   P            Y    F+     + FLWN ++K +S      +   +   ++      DK++  LV+KACS +  V+ G  I   + + G+  D+F+   LI LY K   +  +R++FD MP+R+ VS+ +MI GY   G +V A+ +FDLMP E  N +SWN++I G  +  D
Sbjct:   14 STIHVLGSCKTSDDVNQIHGRLIKTGIIKNSNLTTRIVLAFASSRRPYLADFARCVFHEYHVCSFSFGEVEDPFLWNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACSRLGFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGLIVSARELFDLMPMEMKNLISWNSMISGYAQTSD 235          

HSP 2 Score: 78.9518 bits (193), Expect = 3.593e-14
Identity = 56/191 (29.32%), Postives = 96/191 (50.26%), Query Frame = 2
Query:  203 QVHSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMPERSNVSWNALIGGLVK 775
            Q+H  + K GL  D  L    I L       L  S  +F+R+   ++  +N+++ GY +    +    +F  +  E  + +  ++  +I   S      +G  I + +     ++D+    S+ID Y K   I  A+ +FD MP R+VV+W  MI GYA +G +  AKT+FD MP R  V++N+++ G V+
Sbjct:  142 QIHGFLKKTGLWSDLFLQNCLIGLYLKCGC-LGLSRQMFDRMPKRDSVSYNSMIDGYVKCGLIVSARELFDLMPME--MKNLISWNSMI---SGYAQTSDGVDIASKLFADMPEKDLISWNSMIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQ 326          
BLAST of CX671828 vs. ExPASy Swiss-Prot
Match: PP284_ARATH (Pentatricopeptide repeat-containing protein At3g56550 OS=Arabidopsis thaliana GN=PCMP-H80 PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 3.242e-23
Identity = 61/189 (32.28%), Postives = 103/189 (54.50%), Query Frame = 2
Query:  167 LIKKCKLQTHLHQVHSHIIKKGLEQDHSLVAHFISLCH-SLATPLSYSTAVFNRI-VNPNTFLWNTLLKGYSQNSRFIEVFTIFVR-LIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLM 724
            +++ C     L ++HSH+I  GL+   S+  H +  C  S+   LS++  +F+    +P+T  WN L++G+S +S  +     + R L+   + PD +TF   +K+C  + S+ +   I  +VIR G  +D  V TSL+  Y     +  A KVFDEMP R++VSW  MI  ++ VG   +A +++  M
Sbjct:   11 MLQGCNSMKKLRKIHSHVIINGLQHHPSIFNHLLRFCAVSVTGSLSHAQLLFDHFDSDPSTSDWNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSIPKCLEIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLHNQALSMYKRM 199          

HSP 2 Score: 83.5741 bits (205), Expect = 1.459e-15
Identity = 54/199 (27.14%), Postives = 96/199 (48.24%), Query Frame = 2
Query:  128 NFPKPSCLLSALTLIKKCKLQTHLHQVHSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLM 724
            NF   SC    +  I KC       ++H  +I+ G   D ++VA  +  C+S    +  ++ VF+ +   +   WN ++  +S      +  +++ R+  E    D YT   ++ +C+HV ++  G  +         +  VFV  +LID+Y K   +  A  VF+ M +R+V++W +MI+GY   G  VEA + F  M
Sbjct:  111 NFALKSC--ERIKSIPKCL------EIHGSVIRSGFLDD-AIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKM 300          
BLAST of CX671828 vs. ExPASy Swiss-Prot
Match: PP116_ARATH (Pentatricopeptide repeat-containing protein At1g71490 OS=Arabidopsis thaliana GN=PCMP-E67 PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 4.235e-23
Identity = 64/199 (32.16%), Postives = 104/199 (52.26%), Query Frame = 2
Query:  203 QVHSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTAVFNR-IVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLM----PERSNVSWNALIGGLVKIGD 784
            QVH+H I  G+E    LV   ++   +        + + N  I++P    WN L+  Y++N  F EV   + R++ +   PD +T+P V+KAC   L V  G  +  ++        ++V  +LI +Y + + +  AR++FD M ER+ VSW A+I  YAS G   EA  +FD M     E S ++WN + GG ++ G+
Sbjct:   64 QVHAHCISSGVEYHSVLVPKLVTFYSAFNLHNEAQSIIENSDILHP--LPWNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGSIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTGN 260          

HSP 2 Score: 69.707 bits (169), Expect = 2.180e-11
Identity = 45/192 (23.44%), Postives = 92/192 (47.92%), Query Frame = 2
Query:  152 LSALTLIKKCKLQTHLHQVHSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDED-VFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLM 724
            L A +LI   +L   +H +  H    G++   + +    S C  L     ++  VF +    +   WN+++ GY+Q ++  E   +   ++     P+  T   ++  C+ + +++ G      ++R    +D   +  SL+D+Y K  +I  A++V D M +R+ V++T++I GY + G+   A  +F  M
Sbjct:  287 LKACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLR----HALIVFRQTEENSLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEM 474          
BLAST of CX671828 vs. ExPASy Swiss-Prot
Match: PPR48_ARATH (Pentatricopeptide repeat-containing protein At1g18485 OS=Arabidopsis thaliana GN=PCMP-H8 PE=2 SV=2)

HSP 1 Score: 108.227 bits (269), Expect = 5.531e-23
Identity = 66/197 (33.50%), Postives = 106/197 (53.81%), Query Frame = 2
Query:  149 LLSALTLIKKCKLQTHLHQVHSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIRE-EAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMPERS 736
            LL A    K  ++   +HQ+ S   +  L  D  L    I++     +P   S  VF+ + + N F WN ++  YS+N  + EV   F+ +I   + +PD +T+P VIKAC+ +  V  G A+   V++ G+ EDVFVG +L+  YG    ++ A ++FD MPERN+VSW +MI  ++  G   E+  +   M E +
Sbjct:   90 LLQASGKRKDIEMGRKIHQLVSGSTR--LRNDDVLCTRIITMYAMCGSP-DDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEEN 283          

HSP 2 Score: 86.6557 bits (213), Expect = 1.723e-16
Identity = 61/195 (31.28%), Postives = 99/195 (50.77%), Query Frame = 2
Query:  149 LLSALTLIKKCKLQTHLHQVHSHIIKKGLEQDHSLVAHFISL---CHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLM 724
            LLSA + +K  +L     +VH  II+  LE+D  +    +SL   C  L T      A+F+ + + +   WNT++ GY QN        +F +++         +   V  ACS + S+R G    A  ++  +++D F+  SLID+Y K   I+ + KVF+ + E++  SW AMI+GY   G   EA  +F+ M
Sbjct:  502 LLSACSKLKSLRLGK---EVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTV----QALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEM 689          

HSP 3 Score: 77.411 bits (189), Expect = 1.045e-13
Identity = 54/206 (26.21%), Postives = 100/206 (48.54%), Query Frame = 2
Query:  197 LHQVHSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMP----ERSNVSWNALIGGLVKIGDLRSARQ 802
            L ++H + +K+    +  LVA+     ++    LSY+  VF+ I +     WN L+ G++Q++         +++     +PD +T   ++ ACS + S+R G  +   +IR  ++ D+FV  S++ LY    E+   + +FD M ++++VSW  +I GY   G    A  VF  M     +   +S   + G    +  LR  R+
Sbjct:  414 LKELHCYSLKQEFVYNE-LVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGRE 618          

HSP 4 Score: 67.781 bits (164), Expect = 8.284e-11
Identity = 41/168 (24.40%), Postives = 81/168 (48.21%), Query Frame = 2
Query:  206 VHSHIIKKGLEQDHSLVAHFISL--CHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEA----VPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGD 691
            VH  ++K GL +D  +    +S    H   T    +  +F+ +   N   WN++++ +S N    E F +   ++ E      +PD  T   V+  C+    +  G  +    ++  +D+++ +  +L+D+Y K   I+ A+ +F     +NVVSW  M+ G+++ GD
Sbjct:  209 VHGLVVKTGLVEDVFVGNALVSFYGTHGFVTD---ALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGD 373          

HSP 5 Score: 67.781 bits (164), Expect = 8.284e-11
Identity = 62/232 (26.72%), Postives = 109/232 (46.98%), Query Frame = 2
Query:  146 CLLSALTLIKKCKLQTHLH---QVHSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTA-IQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCA-RKVFDEMPER-NVVSWTAMIVG-----YASVGDLVEAKTVFDLMPER--SNVSWNALIGGLVKIGDLRSARQ 802
            C +S + +   C L   L    + H++ +K  LE D  +    I + ++    ++ S+ VFN +   +T  WN ++ GY  +    E   +F  + R    PD  TF  V+ AC+H   + EG   +      +G+  ++     +ID+ G+  ++  A R V +EM E  +V  W +++          +G+ V AK +F+L PE+  + V  + L  GL K  D+R  RQ
Sbjct:  596 CGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDM-YAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAK-LFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQ 825          
BLAST of CX671828 vs. ExPASy Swiss-Prot
Match: PP108_ARATH (Putative pentatricopeptide repeat-containing protein At1g68930 OS=Arabidopsis thaliana GN=PCMP-H22 PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 5.531e-23
Identity = 67/206 (32.52%), Postives = 100/206 (48.54%), Query Frame = 2
Query:  203 QVHSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMPER----SNVSWNALIGGLVKIGDLRSARQLF 808
            Q+H+ II+    QDH  V   +   +     L Y+  VF+R+   N   W  ++ GY Q  R  E   IF+ + R    PD YT    I AC++V S+ EG+      I  G+   V V  SL+ LYGK  +I  + ++F+EM  R+ VSWTAM+  YA  G  VE   +FD M +       V+   +I    + G +   ++ F
Sbjct:  291 QIHACIIRTNF-QDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYF 495          

HSP 2 Score: 95.9005 bits (237), Expect = 2.840e-19
Identity = 67/230 (29.13%), Postives = 110/230 (47.83%), Query Frame = 2
Query:  152 LSALTLIKKCKLQTHLH---QVHSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLL------------------------------KGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMPERSNV 742
            ++ +T++K      H+    Q+H  +IK G E  + LV   +   ++    +S +  VF  + + NT ++N+L+                              KG +QN    E    F  +  +    D+Y F  V+ AC  + ++ EG  I A +IR    + ++VG++LID+Y K K +  A+ VFD M ++NVVSWTAM+VGY   G   EA  +F L  +RS +
Sbjct:  140 VTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFES-YLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIF-LDMQRSGI 367          

HSP 3 Score: 75.8702 bits (185), Expect = 3.042e-13
Identity = 62/237 (26.16%), Postives = 106/237 (44.73%), Query Frame = 2
Query:  194 HLHQVHSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVP--------------------------------DKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMPERSNVSWNALIGGLVKIGDLRSARQLF 808
            ++  +H +II+  L    + + + I   ++L    +Y+  VF+RI  PN F WN LL  YS+     E+ + F +L   + V                                  + T   ++K  S    V  G  I   VI+ G +  + VG+ L+ +Y     IS A+KVF  + +RN V + +++ G  + G + +A  +F  M E+ +VSW A+I GL + G  + A + F
Sbjct:   24 YVKMIHGNIIR-ALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGM-EKDSVSWAAMIKGLAQNGLAKEAIECF 258          
BLAST of CX671828 vs. ExPASy Swiss-Prot
Match: PPR32_ARATH (Pentatricopeptide repeat-containing protein At1g11290 OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.609e-22
Identity = 82/302 (27.15%), Postives = 139/302 (46.03%), Query Frame = 2
Query:   29 ELTPMPKIDEPNTPCKHKSCSSMLPNCSRSAPIN-FPKPSCLLSALTLIKKCKLQTHLHQVHSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVG------DLVEAK----------TVFDLMPERS------------------------NVSWNALIGGLVKIGDLRSARQLFD 811
            + + +P+I  PN P +H+   S         P N +  P+ LL     +++C     L Q+   + K GL Q+H      +SL     + +  +  VF  I +    L++T+LKG+++ S   +    FVR+  ++  P  Y F  ++K C     +R G  I   +++ G   D+F  T L ++Y K ++++ ARKVFD MPER++VSW  ++ GY+  G      ++V++           T+  ++P  S                        N+S  AL+    K G L +ARQLFD
Sbjct:    7 QFSTVPQI--PNPPSRHRHFLSE----RNYIPANVYEHPAALL-----LERCSSLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGS-VDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNIS-TALVDMYAKCGSLETARQLFD 295          

HSP 2 Score: 93.9745 bits (232), Expect = 1.079e-18
Identity = 53/173 (30.64%), Postives = 93/173 (53.76%), Query Frame = 2
Query:  206 VHSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLM 724
            +H   ++ GL+++ S+V   IS+ +     +  + ++F ++ +     WN ++ G++QN R I+    F ++      PD +T+  VI A + +        I   V+R  +D++VFV T+L+D+Y K   I  AR +FD M ER+V +W AMI GY + G    A  +F+ M
Sbjct:  359 IHKLSVELGLDRNVSVVNSLISM-YCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEM 530          

HSP 3 Score: 89.3521 bits (220), Expect = 2.659e-17
Identity = 61/218 (27.98%), Postives = 101/218 (46.33%), Query Frame = 2
Query:  167 LIKKCKLQTHLH---QVHSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMPER----SNVSWNALIGGLVKIGDLRSAR 799
            L+K C  +  L    ++H  ++K G   D   +    ++ ++    ++ +  VF+R+   +   WNT++ GYSQN        +   +  E   P   T   V+ A S +  +  G  I    +R G D  V + T+L+D+Y K   +  AR++FD M ERNVVSW +MI  Y    +  EA  +F  M +     ++VS    +     +GDL   R
Sbjct:  141 LLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENM-YAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGR 357          

HSP 4 Score: 88.5817 bits (218), Expect = 4.535e-17
Identity = 55/205 (26.83%), Postives = 100/205 (48.78%), Query Frame = 2
Query:  137 KPS--CLLSALTLIKKCKLQTHLHQVHSHIIKKGLEQDHSLVAHFISL---CHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMPERS 736
            KPS   ++S L  +   +L +   ++H + ++ G +   ++    + +   C SL T    +  +F+ ++  N   WN+++  Y QN    E   IF +++ E   P   +    + AC+ +  +  G  I    +  G+D +V V  SLI +Y K KE+  A  +F ++  R +VSW AMI+G+A  G  ++A   F  M  R+
Sbjct:  233 KPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLET----ARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRT 433          
BLAST of CX671828 vs. ExPASy Swiss-Prot
Match: PP423_ARATH (Putative pentatricopeptide repeat-containing protein At5g47460 OS=Arabidopsis thaliana GN=PCMP-E103 PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.609e-22
Identity = 61/202 (30.20%), Postives = 107/202 (52.97%), Query Frame = 2
Query:  203 QVHSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDE-DVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMPERSNVSWNALIGGLVKIGDLRSARQL 805
            Q+H ++ K G   +  L ++ +   +  +  L  +  VF+ + +P+   WN+L+ GY Q+ RF E   +F+ L R +  P++++F   + AC+ +     G  I + +++ G+++ +V VG  LID+YGK   +  A  VF  M E++ VSW A++   +  G L      F  MP    V++N LI   VK GD  +A Q+
Sbjct:   76 QLHGYVTKHGFVSNTRL-SNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQEGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCSRNGKLELGLWFFHQMPNPDTVTYNELIDAFVKSGDFNNAFQV 276          

HSP 2 Score: 83.9593 bits (206), Expect = 1.117e-15
Identity = 45/139 (32.37%), Postives = 75/139 (53.96%), Query Frame = 2
Query:  314 VFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMPE 730
            V + + NPN+  WNT+L GY  + +  E    F ++       D+Y+  +V+ A + +  V  G+ I A   + G+D  V V ++LID+Y K   +  A  +F  MP +N++ W  MI GYA  GD +EA  +F+ + +
Sbjct:  276 VLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKMHSSGVRFDEYSLSIVLAAVAALAVVPWGSLIHACAHKLGLDSRVVVASALIDMYSKCGMLKHAELMFWTMPRKNLIVWNEMISGYARNGDSIEAIKLFNQLKQ 414          
The following BLAST results are available for this feature:
BLAST of CX671828 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 193
Match NameE-valueIdentityDescription
PP336_ARATH8.532e-2427.44Pentatricopeptide repeat-containing protein At4g22... [more]
PP410_ARATH1.455e-2329.95Putative pentatricopeptide repeat-containing prote... [more]
PP219_ARATH1.455e-2332.24Putative pentatricopeptide repeat-containing prote... [more]
PP202_ARATH1.455e-2329.73Pentatricopeptide repeat-containing protein At2g45... [more]
PP284_ARATH3.242e-2332.28Pentatricopeptide repeat-containing protein At3g56... [more]
PP116_ARATH4.235e-2332.16Pentatricopeptide repeat-containing protein At1g71... [more]
PPR48_ARATH5.531e-2333.50Pentatricopeptide repeat-containing protein At1g18... [more]
PP108_ARATH5.531e-2332.52Putative pentatricopeptide repeat-containing prote... [more]
PPR32_ARATH1.609e-2227.15Pentatricopeptide repeat-containing protein At1g11... [more]
PP423_ARATH1.609e-2230.20Putative pentatricopeptide repeat-containing prote... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_13D05_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-13D05-G9-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671828 ID=CX671828; Name=CX671828; organism=Citrus sinensis; type=EST; length=813bp
GGACAGTGGGCAACTATCCCGCGAGGGAGAGCTAACTCCAATGCCCAAAA
TTGACGAACCAAACACGCCATGCAAGCACAAGTCCTGCTCTTCGATGCTA
CCTAACTGCTCACGATCAGCGCCCATCAACTTCCCAAAACCATCGTGTCT
CCTTTCCGCTTTAACCCTGATAAAGAAGTGCAAACTCCAAACTCACCTCC
ACCAGGTTCACTCTCACATCATCAAAAAGGGCCTCGAGCAAGATCACTCT
CTCGTTGCCCACTTCATCTCGCTGTGTCACTCCCTCGCCACTCCCTTATC
TTACTCTACCGCCGTCTTCAACCGCATTGTCAATCCCAATACTTTTCTTT
GGAACACCCTCTTAAAAGGGTACTCTCAGAATTCTCGTTTTATTGAGGTT
TTTACGATTTTTGTTCGATTGATTAGAGAGGAAGCGGTGCCTGATAAGTA
TACGTTCCCATTGGTAATTAAGGCGTGTTCGCATGTGCTTAGTGTGAGGG
AAGGAACGGCGATTCAAGCTGCTGTAATTAGGTGGGGGGTTGATGAGGAT
GTGTTTGTGGGAACTAGTTTGATTGACTTATATGGGAAACGTAAAGAGAT
TTCTTGCGCCCGTAAAGTGTTCGATGAAATGCCTGAGAGAAATGTTGTTT
CATGGACAGCGATGATTGTTGGATATGCGAGTGTTGGGGATTTGGTGGAA
GCGAAGACGGTTTTTGATTTAATGCCGGAGAGGAGTAATGTTTCATGGAA
TGCTTTGATTGGGGGGTTAGTGAAGATAGGAGATTTGAGAAGTGCTAGGC
AGTTGTTTGATGA
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