CX671828
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX671828 vs. ExPASy Swiss-Prot
Match: PP336_ARATH (Pentatricopeptide repeat-containing protein At4g22765 OS=Arabidopsis thaliana GN=PCMP-E6 PE=2 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 8.532e-24 Identity = 59/215 (27.44%), Postives = 110/215 (51.16%), Query Frame = 2 Query: 170 IKKCKLQTHLHQVHSHIIKKGLEQDHSLVAH-FISLCHSLATPL-SYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMPERSNVSWNALIGGLVKIGDLRSARQLF 808 +++C + QVH+ ++ ++ H + + + +Y + ++F W L++ SQ+ +F E +++ + P + V++AC + ++ +G I A ++ G+ V+V T L+ LY + I A+K FD++ E+N VSW +++ GY G+L EA+ VFD +PE+ VSWN +I K GD+ +A LF Sbjct: 10 LQRCVVLEQAKQVHAQLVVNRYNHLEPILVHQTLHFTKEFSRNIVTYVKRILKGFNGHDSFSWGCLVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRACGKMENMVDGKPIHAQALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGELDEARRVFDKIPEKDAVSWNLIISSYAKKGDMGNACSLF 224 HSP 2 Score: 77.0258 bits (188), Expect = 1.365e-13 Identity = 58/230 (25.22%), Postives = 104/230 (45.22%), Query Frame = 2 Query: 134 PKPSCLLSALTLIKKCKLQTHLHQVHSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAV-----IRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMPERSNVSWNALIGGLVKIGDLRSARQLF 808 P + S L K + +H+ +K GL + + L L + + F+ I NT WN+LL GY ++ E +F ++ ++AV ++ L+I + + + ++ +A+ W + LI Y +E+ AR FD MP++N VSW MI GY +GD+ A+ +F LM ++ + ++A+I + G + A +LF Sbjct: 102 PSSHAVTSVLRACGKMENMVDGKPIHAQALKNGLCGCVYVQTGLVGLYSRLGY-IELAKKAFDDIAEKNTVSWNSLLHGYLESGELDEARRVFDKIPEKDAV----SWNLIISSYAKKGDMGNACSLFSAMPLKSPASWNI---------LIGGYVNCREMKLARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEELFRLMSKKDKLVYDAMIACYTQNGKPKDALKLF 317
BLAST of CX671828 vs. ExPASy Swiss-Prot
Match: PP410_ARATH (Putative pentatricopeptide repeat-containing protein At5g40405 OS=Arabidopsis thaliana GN=PCMP-H14 PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.455e-23 Identity = 62/207 (29.95%), Postives = 108/207 (52.17%), Query Frame = 2 Query: 197 LHQVHSHIIKKGLEQDHSLVAHFI-SLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIRE--EAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMPERSNVSWNALIGGLVKIGDLRSARQLF 808 + Q+H+ + G +D LV HF+ ++ S L Y+ + +R P F N++++ + ++ + F + R++ + PD YT +++AC+ + G + IR G D D V T LI LY + + KVF+ +P + V TAM+ A GD+V A+ +F+ MPER ++WNA+I G ++G+ R A +F Sbjct: 22 VRQIHAKLYVDGTLKDDHLVGHFVKAVALSDHKYLDYANQILDRSEKPTLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVF 228
BLAST of CX671828 vs. ExPASy Swiss-Prot
Match: PP219_ARATH (Putative pentatricopeptide repeat-containing protein At3g08820 OS=Arabidopsis thaliana GN=PCMP-H84 PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.455e-23 Identity = 69/214 (32.24%), Postives = 107/214 (50.00%), Query Frame = 2 Query: 164 TLIKKCKLQTHLHQVHSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMPER----SNVSWNALIGGLVKIGDLRS 793 TLI HL Q+H +I L D LV + YS +F+ PN FL+N+L+ G+ N F E +F+ + + +TFPLV+KAC+ S + G + + V++ G + DV TSL+ +Y ++ A K+FDE+P+R+VV+WTA+ GY + G EA +F M E + ++ V +GDL S Sbjct: 18 TLISVACTVNHLKQIHVSLINHHLHHDTFLVNLLLKRT-LFFRQTKYSYLLFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDS 230 HSP 2 Score: 90.5077 bits (223), Expect = 1.193e-17 Identity = 54/178 (30.34%), Postives = 92/178 (51.69%), Query Frame = 2 Query: 149 LLSALTLIKKCKLQTHLHQVHSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYAS 682 +L A T KL LH + ++K G D + + +S+ +S + L+ + +F+ I + + W L GY+ + R E +F +++ PD Y V+ AC HV + G I + + ++ FV T+L++LY K ++ AR VFD M E+++V+W+ MI GYAS Sbjct: 117 VLKACTRASSRKLGIDLHSL---VVKCGFNHDVAAMTSLLSI-YSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYAS 290
BLAST of CX671828 vs. ExPASy Swiss-Prot
Match: PP202_ARATH (Pentatricopeptide repeat-containing protein At2g45350, chloroplastic OS=Arabidopsis thaliana GN=CRR4 PE=2 SV=2) HSP 1 Score: 110.153 bits (274), Expect = 1.455e-23 Identity = 66/222 (29.73%), Postives = 112/222 (50.45%), Query Frame = 2 Query: 155 SALTLIKKCKLQTHLHQVHSHIIKKGLEQDHSLVAHFISLCHSLATPL----------SYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMP-ERSN-VSWNALIGGLVKIGD 784 S + ++ CK ++Q+H +IK G+ ++ +L + S P Y F+ + FLWN ++K +S + + ++ DK++ LV+KACS + V+ G I + + G+ D+F+ LI LY K + +R++FD MP+R+ VS+ +MI GY G +V A+ +FDLMP E N +SWN++I G + D Sbjct: 14 STIHVLGSCKTSDDVNQIHGRLIKTGIIKNSNLTTRIVLAFASSRRPYLADFARCVFHEYHVCSFSFGEVEDPFLWNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACSRLGFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGLIVSARELFDLMPMEMKNLISWNSMISGYAQTSD 235 HSP 2 Score: 78.9518 bits (193), Expect = 3.593e-14 Identity = 56/191 (29.32%), Postives = 96/191 (50.26%), Query Frame = 2 Query: 203 QVHSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMPERSNVSWNALIGGLVK 775 Q+H + K GL D L I L L S +F+R+ ++ +N+++ GY + + +F + E + + ++ +I S +G I + + ++D+ S+ID Y K I A+ +FD MP R+VV+W MI GYA +G + AKT+FD MP R V++N+++ G V+ Sbjct: 142 QIHGFLKKTGLWSDLFLQNCLIGLYLKCGC-LGLSRQMFDRMPKRDSVSYNSMIDGYVKCGLIVSARELFDLMPME--MKNLISWNSMI---SGYAQTSDGVDIASKLFADMPEKDLISWNSMIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQ 326
BLAST of CX671828 vs. ExPASy Swiss-Prot
Match: PP284_ARATH (Pentatricopeptide repeat-containing protein At3g56550 OS=Arabidopsis thaliana GN=PCMP-H80 PE=2 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 3.242e-23 Identity = 61/189 (32.28%), Postives = 103/189 (54.50%), Query Frame = 2 Query: 167 LIKKCKLQTHLHQVHSHIIKKGLEQDHSLVAHFISLCH-SLATPLSYSTAVFNRI-VNPNTFLWNTLLKGYSQNSRFIEVFTIFVR-LIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLM 724 +++ C L ++HSH+I GL+ S+ H + C S+ LS++ +F+ +P+T WN L++G+S +S + + R L+ + PD +TF +K+C + S+ + I +VIR G +D V TSL+ Y + A KVFDEMP R++VSW MI ++ VG +A +++ M Sbjct: 11 MLQGCNSMKKLRKIHSHVIINGLQHHPSIFNHLLRFCAVSVTGSLSHAQLLFDHFDSDPSTSDWNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSIPKCLEIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLHNQALSMYKRM 199 HSP 2 Score: 83.5741 bits (205), Expect = 1.459e-15 Identity = 54/199 (27.14%), Postives = 96/199 (48.24%), Query Frame = 2 Query: 128 NFPKPSCLLSALTLIKKCKLQTHLHQVHSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLM 724 NF SC + I KC ++H +I+ G D ++VA + C+S + ++ VF+ + + WN ++ +S + +++ R+ E D YT ++ +C+HV ++ G + + VFV +LID+Y K + A VF+ M +R+V++W +MI+GY G VEA + F M Sbjct: 111 NFALKSC--ERIKSIPKCL------EIHGSVIRSGFLDD-AIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKM 300
BLAST of CX671828 vs. ExPASy Swiss-Prot
Match: PP116_ARATH (Pentatricopeptide repeat-containing protein At1g71490 OS=Arabidopsis thaliana GN=PCMP-E67 PE=2 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 4.235e-23 Identity = 64/199 (32.16%), Postives = 104/199 (52.26%), Query Frame = 2 Query: 203 QVHSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTAVFNR-IVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLM----PERSNVSWNALIGGLVKIGD 784 QVH+H I G+E LV ++ + + + N I++P WN L+ Y++N F EV + R++ + PD +T+P V+KAC L V G + ++ ++V +LI +Y + + + AR++FD M ER+ VSW A+I YAS G EA +FD M E S ++WN + GG ++ G+ Sbjct: 64 QVHAHCISSGVEYHSVLVPKLVTFYSAFNLHNEAQSIIENSDILHP--LPWNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGSIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTGN 260 HSP 2 Score: 69.707 bits (169), Expect = 2.180e-11 Identity = 45/192 (23.44%), Postives = 92/192 (47.92%), Query Frame = 2 Query: 152 LSALTLIKKCKLQTHLHQVHSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDED-VFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLM 724 L A +LI +L +H + H G++ + + S C L ++ VF + + WN+++ GY+Q ++ E + ++ P+ T ++ C+ + +++ G ++R +D + SL+D+Y K +I A++V D M +R+ V++T++I GY + G+ A +F M Sbjct: 287 LKACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLR----HALIVFRQTEENSLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEM 474
BLAST of CX671828 vs. ExPASy Swiss-Prot
Match: PPR48_ARATH (Pentatricopeptide repeat-containing protein At1g18485 OS=Arabidopsis thaliana GN=PCMP-H8 PE=2 SV=2) HSP 1 Score: 108.227 bits (269), Expect = 5.531e-23 Identity = 66/197 (33.50%), Postives = 106/197 (53.81%), Query Frame = 2 Query: 149 LLSALTLIKKCKLQTHLHQVHSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIRE-EAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMPERS 736 LL A K ++ +HQ+ S + L D L I++ +P S VF+ + + N F WN ++ YS+N + EV F+ +I + +PD +T+P VIKAC+ + V G A+ V++ G+ EDVFVG +L+ YG ++ A ++FD MPERN+VSW +MI ++ G E+ + M E + Sbjct: 90 LLQASGKRKDIEMGRKIHQLVSGSTR--LRNDDVLCTRIITMYAMCGSP-DDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEEN 283 HSP 2 Score: 86.6557 bits (213), Expect = 1.723e-16 Identity = 61/195 (31.28%), Postives = 99/195 (50.77%), Query Frame = 2 Query: 149 LLSALTLIKKCKLQTHLHQVHSHIIKKGLEQDHSLVAHFISL---CHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLM 724 LLSA + +K +L +VH II+ LE+D + +SL C L T A+F+ + + + WNT++ GY QN +F +++ + V ACS + S+R G A ++ +++D F+ SLID+Y K I+ + KVF+ + E++ SW AMI+GY G EA +F+ M Sbjct: 502 LLSACSKLKSLRLGK---EVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTV----QALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEM 689 HSP 3 Score: 77.411 bits (189), Expect = 1.045e-13 Identity = 54/206 (26.21%), Postives = 100/206 (48.54%), Query Frame = 2 Query: 197 LHQVHSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMP----ERSNVSWNALIGGLVKIGDLRSARQ 802 L ++H + +K+ + LVA+ ++ LSY+ VF+ I + WN L+ G++Q++ +++ +PD +T ++ ACS + S+R G + +IR ++ D+FV S++ LY E+ + +FD M ++++VSW +I GY G A VF M + +S + G + LR R+ Sbjct: 414 LKELHCYSLKQEFVYNE-LVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGRE 618 HSP 4 Score: 67.781 bits (164), Expect = 8.284e-11 Identity = 41/168 (24.40%), Postives = 81/168 (48.21%), Query Frame = 2 Query: 206 VHSHIIKKGLEQDHSLVAHFISL--CHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEA----VPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGD 691 VH ++K GL +D + +S H T + +F+ + N WN++++ +S N E F + ++ E +PD T V+ C+ + G + ++ +D+++ + +L+D+Y K I+ A+ +F +NVVSW M+ G+++ GD Sbjct: 209 VHGLVVKTGLVEDVFVGNALVSFYGTHGFVTD---ALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGD 373 HSP 5 Score: 67.781 bits (164), Expect = 8.284e-11 Identity = 62/232 (26.72%), Postives = 109/232 (46.98%), Query Frame = 2 Query: 146 CLLSALTLIKKCKLQTHLH---QVHSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTA-IQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCA-RKVFDEMPER-NVVSWTAMIVG-----YASVGDLVEAKTVFDLMPER--SNVSWNALIGGLVKIGDLRSARQ 802 C +S + + C L L + H++ +K LE D + I + ++ ++ S+ VFN + +T WN ++ GY + E +F + R PD TF V+ AC+H + EG + +G+ ++ +ID+ G+ ++ A R V +EM E +V W +++ +G+ V AK +F+L PE+ + V + L GL K D+R RQ Sbjct: 596 CGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDM-YAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAK-LFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQ 825
BLAST of CX671828 vs. ExPASy Swiss-Prot
Match: PP108_ARATH (Putative pentatricopeptide repeat-containing protein At1g68930 OS=Arabidopsis thaliana GN=PCMP-H22 PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 5.531e-23 Identity = 67/206 (32.52%), Postives = 100/206 (48.54%), Query Frame = 2 Query: 203 QVHSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMPER----SNVSWNALIGGLVKIGDLRSARQLF 808 Q+H+ II+ QDH V + + L Y+ VF+R+ N W ++ GY Q R E IF+ + R PD YT I AC++V S+ EG+ I G+ V V SL+ LYGK +I + ++F+EM R+ VSWTAM+ YA G VE +FD M + V+ +I + G + ++ F Sbjct: 291 QIHACIIRTNF-QDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYF 495 HSP 2 Score: 95.9005 bits (237), Expect = 2.840e-19 Identity = 67/230 (29.13%), Postives = 110/230 (47.83%), Query Frame = 2 Query: 152 LSALTLIKKCKLQTHLH---QVHSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLL------------------------------KGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMPERSNV 742 ++ +T++K H+ Q+H +IK G E + LV + ++ +S + VF + + NT ++N+L+ KG +QN E F + + D+Y F V+ AC + ++ EG I A +IR + ++VG++LID+Y K K + A+ VFD M ++NVVSWTAM+VGY G EA +F L +RS + Sbjct: 140 VTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFES-YLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIF-LDMQRSGI 367 HSP 3 Score: 75.8702 bits (185), Expect = 3.042e-13 Identity = 62/237 (26.16%), Postives = 106/237 (44.73%), Query Frame = 2 Query: 194 HLHQVHSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVP--------------------------------DKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMPERSNVSWNALIGGLVKIGDLRSARQLF 808 ++ +H +II+ L + + + I ++L +Y+ VF+RI PN F WN LL YS+ E+ + F +L + V + T ++K S V G I VI+ G + + VG+ L+ +Y IS A+KVF + +RN V + +++ G + G + +A +F M E+ +VSW A+I GL + G + A + F Sbjct: 24 YVKMIHGNIIR-ALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGM-EKDSVSWAAMIKGLAQNGLAKEAIECF 258
BLAST of CX671828 vs. ExPASy Swiss-Prot
Match: PPR32_ARATH (Pentatricopeptide repeat-containing protein At1g11290 OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.609e-22 Identity = 82/302 (27.15%), Postives = 139/302 (46.03%), Query Frame = 2 Query: 29 ELTPMPKIDEPNTPCKHKSCSSMLPNCSRSAPIN-FPKPSCLLSALTLIKKCKLQTHLHQVHSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVG------DLVEAK----------TVFDLMPERS------------------------NVSWNALIGGLVKIGDLRSARQLFD 811 + + +P+I PN P +H+ S P N + P+ LL +++C L Q+ + K GL Q+H +SL + + + VF I + L++T+LKG+++ S + FVR+ ++ P Y F ++K C +R G I +++ G D+F T L ++Y K ++++ ARKVFD MPER++VSW ++ GY+ G ++V++ T+ ++P S N+S AL+ K G L +ARQLFD Sbjct: 7 QFSTVPQI--PNPPSRHRHFLSE----RNYIPANVYEHPAALL-----LERCSSLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGS-VDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNIS-TALVDMYAKCGSLETARQLFD 295 HSP 2 Score: 93.9745 bits (232), Expect = 1.079e-18 Identity = 53/173 (30.64%), Postives = 93/173 (53.76%), Query Frame = 2 Query: 206 VHSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLM 724 +H ++ GL+++ S+V IS+ + + + ++F ++ + WN ++ G++QN R I+ F ++ PD +T+ VI A + + I V+R +D++VFV T+L+D+Y K I AR +FD M ER+V +W AMI GY + G A +F+ M Sbjct: 359 IHKLSVELGLDRNVSVVNSLISM-YCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEM 530 HSP 3 Score: 89.3521 bits (220), Expect = 2.659e-17 Identity = 61/218 (27.98%), Postives = 101/218 (46.33%), Query Frame = 2 Query: 167 LIKKCKLQTHLH---QVHSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMPER----SNVSWNALIGGLVKIGDLRSAR 799 L+K C + L ++H ++K G D + ++ ++ ++ + VF+R+ + WNT++ GYSQN + + E P T V+ A S + + G I +R G D V + T+L+D+Y K + AR++FD M ERNVVSW +MI Y + EA +F M + ++VS + +GDL R Sbjct: 141 LLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENM-YAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGR 357 HSP 4 Score: 88.5817 bits (218), Expect = 4.535e-17 Identity = 55/205 (26.83%), Postives = 100/205 (48.78%), Query Frame = 2 Query: 137 KPS--CLLSALTLIKKCKLQTHLHQVHSHIIKKGLEQDHSLVAHFISL---CHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMPERS 736 KPS ++S L + +L + ++H + ++ G + ++ + + C SL T + +F+ ++ N WN+++ Y QN E IF +++ E P + + AC+ + + G I + G+D +V V SLI +Y K KE+ A +F ++ R +VSW AMI+G+A G ++A F M R+ Sbjct: 233 KPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLET----ARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRT 433
BLAST of CX671828 vs. ExPASy Swiss-Prot
Match: PP423_ARATH (Putative pentatricopeptide repeat-containing protein At5g47460 OS=Arabidopsis thaliana GN=PCMP-E103 PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.609e-22 Identity = 61/202 (30.20%), Postives = 107/202 (52.97%), Query Frame = 2 Query: 203 QVHSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDE-DVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMPERSNVSWNALIGGLVKIGDLRSARQL 805 Q+H ++ K G + L ++ + + + L + VF+ + +P+ WN+L+ GY Q+ RF E +F+ L R + P++++F + AC+ + G I + +++ G+++ +V VG LID+YGK + A VF M E++ VSW A++ + G L F MP V++N LI VK GD +A Q+ Sbjct: 76 QLHGYVTKHGFVSNTRL-SNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQEGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCSRNGKLELGLWFFHQMPNPDTVTYNELIDAFVKSGDFNNAFQV 276 HSP 2 Score: 83.9593 bits (206), Expect = 1.117e-15 Identity = 45/139 (32.37%), Postives = 75/139 (53.96%), Query Frame = 2 Query: 314 VFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMPE 730 V + + NPN+ WNT+L GY + + E F ++ D+Y+ +V+ A + + V G+ I A + G+D V V ++LID+Y K + A +F MP +N++ W MI GYA GD +EA +F+ + + Sbjct: 276 VLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKMHSSGVRFDEYSLSIVLAAVAALAVVPWGSLIHACAHKLGLDSRVVVASALIDMYSKCGMLKHAELMFWTMPRKNLIVWNEMISGYARNGDSIEAIKLFNQLKQ 414 The following BLAST results are available for this feature:
BLAST of CX671828 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 193
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Sequences
The
following sequences are available for this feature:
EST sequence >CX671828 ID=CX671828; Name=CX671828; organism=Citrus sinensis; type=EST; length=813bpback to top |