CX671828
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX671828 vs. ExPASy Swiss-Prot
Match: PP258_ARATH (Pentatricopeptide repeat-containing protein At3g26782, mitochondrial OS=Arabidopsis thaliana GN=PCMP-H34 PE=2 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.609e-22 Identity = 62/194 (31.96%), Postives = 106/194 (54.64%), Query Frame = 2 Query: 149 LLSALTLIKKCKLQTHLHQVHSHIIKKGLEQDHSLVAHFI-SLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVP-DKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLM 724 L+S ++ + + +HS +IK+G ++ S+ + + ++ + +F++IV+ + +N+++ Y+Q+ E F +F RL++ + V + T V+ A SH ++R G I VIR G+++DV VGTS+ID+Y K + ARK FD M +NV SWTAMI GY G +A +F M Sbjct: 186 LVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAM 379 HSP 2 Score: 93.5893 bits (231), Expect = 1.410e-18 Identity = 49/146 (33.56%), Postives = 84/146 (57.53%), Query Frame = 2 Query: 308 TAVFNRIVNP-NTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVF-DLMPERSN 739 T +FNR V+ + F WN+++ +++ E F + + P + +FP IKACS + + G +G D+FV ++LI +Y ++ ARKVFDE+P+RN+VSWT+MI GY G+ ++A ++F DL+ + ++ Sbjct: 29 TTLFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDEND 174 HSP 3 Score: 79.337 bits (194), Expect = 2.751e-14 Identity = 56/193 (29.02%), Postives = 96/193 (49.74%), Query Frame = 2 Query: 203 QVHSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTF------PLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKE--ISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMPERSNVSWNAL 757 Q H G + D V+ + + +S L + VF+ I N W ++++GY N ++ ++F L+ +E D F VI ACS V + +I + VI+ G D V VG +L+D Y K E ++ ARK+FD++ +++ VS+ +++ YA G EA VF + + V++NA+ Sbjct: 97 QTHQQAFVFGYQSD-IFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAI 288
BLAST of CX671828 vs. ExPASy Swiss-Prot
Match: PP214_ARATH (Putative pentatricopeptide repeat-containing protein At3g05240 OS=Arabidopsis thaliana GN=PCMP-E82 PE=3 SV=2) HSP 1 Score: 106.686 bits (265), Expect = 1.609e-22 Identity = 52/186 (27.96%), Postives = 108/186 (58.06%), Query Frame = 2 Query: 161 LTLIKKCKLQTHLHQVHSHIIKKGLEQDHSLVAHFISLCHSLATP--LSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYAS---VGDLVEA 703 L+ ++ C+ L+Q+H +IK + ++ ++ I C + LSY+ +VF I P+ ++WN++++GYS + + + ++R+ PD +TFP V+KACS + ++ G+ + V++ G + +++V T L+ +Y E++ +VF+++P+ NVV+W ++I G+ + D +EA Sbjct: 10 LSQLENCRSLVELNQLHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYARSVFESIDCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSDAIEA 195 HSP 2 Score: 83.1889 bits (204), Expect = 1.905e-15 Identity = 42/132 (31.82%), Postives = 75/132 (56.82%), Query Frame = 2 Query: 350 WNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMPERSNVS 745 WN+++ GYSQN E +F+ ++ PDK TF VI+A + G +I A V + G +D + +L+++Y K + A+K F+++ +++ ++WT +I+G AS G EA ++F M E+ N + Sbjct: 285 WNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNAT 416 HSP 3 Score: 80.4925 bits (197), Expect = 1.235e-14 Identity = 52/182 (28.57%), Postives = 82/182 (45.05%), Query Frame = 2 Query: 206 VHSHIIKKGLEQDHSLVAHFISLC----HSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDE--------DVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVF 715 VH ++K G E V ++S C + ++Y VF I N W +L+ G+ N+RF + F + ++ ++ AC + G + G D +V + TSLID+Y K ++ AR +FD MPER +VSW ++I GY+ GD EA +F Sbjct: 129 VHGFVVKTGFE-----VNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMF 305
BLAST of CX671828 vs. ExPASy Swiss-Prot
Match: PPR14_ARATH (Pentatricopeptide repeat-containing protein At1g06140, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E61 PE=2 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.745e-22 Identity = 67/230 (29.13%), Postives = 121/230 (52.61%), Query Frame = 2 Query: 152 LSALTLIKKC------KLQTHLHQVHSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMPER----SNVSWNALIGGLVKIGDLRSARQLFD 811 L+ + L+K C K+ +H V I + ++Q L A I + + L + +F V+ N +W TL+ G+++ R +E F +F +++RE +P++ T ++ +CS + S+R G ++ +IR G++ D TS ID+Y + I AR VFD MPERNV+SW++MI + G EA F M + ++V++ +L+ G+++ + F+ Sbjct: 211 LTLICLVKACGNVFAGKVGKCVHGVS--IRRSFIDQSDYLQASIIDM-YVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFE 437 HSP 2 Score: 98.2117 bits (243), Expect = 5.723e-20 Identity = 59/192 (30.73%), Postives = 99/192 (51.56%), Query Frame = 2 Query: 161 LTLIKKCKLQTHLHQVHSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTAVFNRIV--NPNTFLWNTLLKGYSQNSR--FIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLM 724 LT++ + K H QVH+ +I G E D ++ ++ + + L ++T+ FNRI N WNT+L GYS++ + +V ++ R+ R D + IKAC + + G I ++ G+D+D +V SL+++Y + + A+KVFDE+P RN V W ++ GY E +F LM Sbjct: 11 LTILSQAKTLNHTQQVHAKVIIHGFE-DEVVLGSSLTNAYIQSNRLDFATSSFNRIPCWKRNRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENGILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEVFRLFCLM 201 HSP 3 Score: 93.9745 bits (232), Expect = 1.079e-18 Identity = 60/205 (29.27%), Postives = 102/205 (49.76%), Query Frame = 2 Query: 206 VHSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWG-VDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMPERS----NVSWNALIGGLVKIGDLRSARQL 805 +H +K GL++D + + + L T + + VF+ I N+ LW L+KGY + S+ EVF +F + D T ++KAC +V + + G + IR +D+ ++ S+ID+Y K + + ARK+F+ +RNVV WT +I G+A VEA +F M S + A++ +G LR + + Sbjct: 131 IHGLAMKNGLDKDDYVAPSLVEMYAQLGT-MESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSV 334 HSP 4 Score: 71.633 bits (174), Expect = 5.737e-12 Identity = 47/189 (24.87%), Postives = 90/189 (47.62%), Query Frame = 2 Query: 194 HLHQVHSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIR-WGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVE-----AKTVFDLMPERSNV 742 H VH ++I+ G+E D FI + ++ + + VF+ + N W++++ + N F E F ++ + VP+ TF ++ ACSH +V+EG ++ R +GV + ++DL G+ EI A+ D MP + + S ++ + V+ A+ + + PE+S+V Sbjct: 330 HGKSVHGYMIRNGIEMDAVNFTSFIDM-YARCGNIQMARTVFDMMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLSACRIHKEVDLAGEIAEKLLSMEPEKSSV 517
BLAST of CX671828 vs. ExPASy Swiss-Prot
Match: PP394_ARATH (Pentatricopeptide repeat-containing protein At5g19020, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E42 PE=2 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 4.682e-22 Identity = 73/246 (29.67%), Postives = 123/246 (50.00%), Query Frame = 2 Query: 149 LLSALTLIKKCKLQTHLHQVHSHIIKKGLEQDHSL---VAHFISLCHSLATPLSY-------STAVFNRIVNP---NTFLWN-----------------TLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMPERSNVSWNALIGGLVKIGDLRSA 796 L+SAL T Q+H ++K GL+ + + V + + C LA S +A FN +V+ + LW+ TL+KGY+QN+++ E +F + + ++ T VI ACSH+ + + +Q+ I+ ++ VFV T+L+ +Y + ARK+FDEMPERN+V+W M+ GY+ G + +A+ +FD + E+ VSW +I G ++ L A Sbjct: 44 LVSALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDHAKLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEA 289
BLAST of CX671828 vs. ExPASy Swiss-Prot
Match: PP184_ARATH (Pentatricopeptide repeat-containing protein At2g34400 OS=Arabidopsis thaliana GN=PCMP-E23 PE=2 SV=2) HSP 1 Score: 104.375 bits (259), Expect = 7.986e-22 Identity = 62/220 (28.18%), Postives = 116/220 (52.73%), Query Frame = 2 Query: 161 LTLIKKCKLQTHLHQVHSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEV-FTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMPER----SNVSWNALIGGLVKIGDLRSARQL 805 L L+KKC L Q+ + ++ +E+ + L+ + L +YS+ +F+ PN + +N +++G + E +++ R+ PDK+T+ V AC+ + + G ++ +++ + G++ DV + SLI +Y K ++ ARK+FDE+ ER+ VSW +MI GY+ G +A +F M E + +++G +GDLR+ R L Sbjct: 41 LFLLKKCISVNQLRQIQAQMLLHSVEKPNFLIPKAVEL-----GDFNYSSFLFSVTEEPNHYSFNYMIRGLTNTWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLL 255 HSP 2 Score: 102.834 bits (255), Expect = 2.324e-21 Identity = 61/205 (29.76%), Postives = 111/205 (54.15%), Query Frame = 2 Query: 206 VHSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMPERSNVSWNA-----LIGGLVKIGDLRSARQL 805 VHS + K GLE+D + H + + ++ + Y+ +F+ I +T WN+++ GYS+ + +F ++ E PD+ T ++ ACSH+ +R G ++ I + F+G+ LI +YGK ++ AR+VF++M +++ V+WTAMI Y+ G EA +F M E++ VS +A ++ +G L +Q+ Sbjct: 154 VHSSLFKVGLERDVH-INHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEM-EKTGVSPDAGTLSTVLSACGSVGALELGKQI 356 HSP 3 Score: 93.9745 bits (232), Expect = 1.079e-18 Identity = 65/246 (26.42%), Postives = 109/246 (44.31%), Query Frame = 2 Query: 47 KIDEPNTPCKHKSCSSMLPNCSRSAPINFPKPSCLLSALTLIKKCKLQTHLHQVHSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMP-ERSNVSWNALIGGLVKIG 781 K++E ++ SML CS + + LL + + KK L T L + IS+ + L + VFN+++ + W ++ YSQN + E F +F + + PD T V+ AC V ++ G I+ + +++V T L+D+YGK + A +VF+ MP +N +W AMI YA G EA +FD M S++++ ++ V G Sbjct: 223 KMEEEGFEPDERTLVSMLGACSHLGDLRTGR---LLEEMAITKKIGLSTFLG------------------SKLISM-YGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMITAYAHQGHAKEALLLFDRMSVPPSDITFIGVLSACVHAG 446
BLAST of CX671828 vs. ExPASy Swiss-Prot
Match: PP319_ARATH (Pentatricopeptide repeat-containing protein At4g18520 OS=Arabidopsis thaliana GN=PCMP-A2 PE=2 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 1.043e-21 Identity = 60/194 (30.93%), Postives = 107/194 (55.15%), Query Frame = 2 Query: 203 QVHSHIIKKGLEQ---DHSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMPERSNVSWNALIGGLVK 775 QVH +++K G+ + SLV +F + C L + L F+ + + W ++ S+ I+ +F+ ++ +P+++T ++KACS ++R G + + V++ + DVFVGTSL+D+Y K EIS RKVFD M RN V+WT++I +A G EA ++F +M R ++ N + +++ Sbjct: 205 QVHGNMVKVGVGNLIVESSLV-YFYAQCGELTSALR----AFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILR 393 HSP 2 Score: 85.5001 bits (210), Expect = 3.839e-16 Identity = 50/183 (27.32%), Postives = 100/183 (54.64%), Query Frame = 2 Query: 164 TLIKKCKLQTHLH---QVHSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEA 703 +++K C + L QVHS ++K+ ++ D + + + ++ +S VF+ + N NT W +++ +++ E ++F + R + + T +++AC V ++ G + A +I+ ++++V++G++L+ LY K E A V ++P R+VVSWTAMI G +S+G EA Sbjct: 289 SILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDM-YAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEA 470 HSP 3 Score: 82.8037 bits (203), Expect = 2.488e-15 Identity = 51/168 (30.36%), Postives = 91/168 (54.17%), Query Frame = 2 Query: 203 QVHSHIIKKGLEQDHSLVAHFISL-CHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEA 703 ++H+ IIK +E++ + + + L C + +++ V ++ + + W ++ G S E +I+E P+ +T+ +KAC++ S+ G +I + + +VFVG++LI +Y K +S A +VFD MPE+N+VSW AMI+GYA G EA Sbjct: 406 ELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFN--VLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREA 571
BLAST of CX671828 vs. ExPASy Swiss-Prot
Match: PP295_ARATH (Pentatricopeptide repeat-containing protein At3g62890 OS=Arabidopsis thaliana GN=PCMP-H82 PE=2 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 1.043e-21 Identity = 52/178 (29.21%), Postives = 102/178 (57.30%), Query Frame = 2 Query: 287 ATPLSYSTAVFN-RIVNPNTFLWNTLLKGYSQNSRFIE---VFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMPERSNVSWNALIGGLVKIGDLRSARQLF 808 A ++Y+ +F+ R + +FLWN +++ N + ++++R+ PD +TFP ++ + + L + G A ++ +G+D+D FV TSL+++Y ++ A++VFD+ +++ +W +++ YA G + +A+ +FD MPER+ +SW+ LI G V G + A LF Sbjct: 5 AAIIAYANPIFHIRHLKLESFLWNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLF 182
BLAST of CX671828 vs. ExPASy Swiss-Prot
Match: PP237_ARATH (Pentatricopeptide repeat-containing protein At3g16610 OS=Arabidopsis thaliana GN=PCMP-E91 PE=2 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 1.043e-21 Identity = 61/225 (27.11%), Postives = 116/225 (51.56%), Query Frame = 2 Query: 161 LTLIKKCKLQTHL---HQVHSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTAVFNRIVNP--NTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYA-------SVGDLVEAKTVFDLMPERSNVSWNALIGGLVKIGDLRSAR 799 L+L++ C +L +H H++K+ L S V ++ ++ + + VF+ I +P N W+ +++ Y+ N + ++ +++ P KYT+P V+KAC+ + ++ +G I + V D++V T+L+D Y K E+ A KVFDEMP+R++V+W AMI G++ +G ++ + + L P S + + L + G LR + Sbjct: 3 LSLLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDEIPHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIV--GMFPALGRAGALREGK 225 HSP 2 Score: 81.2629 bits (199), Expect = 7.240e-15 Identity = 56/205 (27.32%), Postives = 95/205 (46.34%), Query Frame = 2 Query: 206 VHSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAV-PDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMPERSNVSW------NALIGGLVKIGDLRSAR 799 +HSH+ D + + ++ L + VF+ + + WN ++ G+S + +V +F+ + R + + P+ T + A ++REG A+ R G D+ V T ++D+Y K K I AR+VFD ++N V+W+AMI GY + EA VF M NV+ ++ G + GDL R Sbjct: 125 IHSHVNCSDFATDMYVCTALVDF-YAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVNDNVAMVTPVAIGLILMGCARFGDLSGGR 328 HSP 3 Score: 73.9442 bits (180), Expect = 1.156e-12 Identity = 55/206 (26.70%), Postives = 98/206 (47.57%), Query Frame = 2 Query: 206 VHSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMPER----SNVSWNALIGGLVKIGDLRSARQLFD 811 VH + +K G D ++ IS + L + F+ I + +N+L+ G N R E F +F + PD T V+ ACSH+ ++ G++ + G + + +L+D+Y K ++ A++VFD M +R++VSW M+ G+ G EA ++F+ M E V+ A++ G + +QLF+ Sbjct: 330 VHCYAVKAGFILDLTVQNTIISFYAKYGS-LCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLLAILSACSHSGLVDEGKQLFN 534
BLAST of CX671828 vs. ExPASy Swiss-Prot
Match: PP227_ARATH (Putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial OS=Arabidopsis thaliana GN=PCMP-H85 PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 1.043e-21 Identity = 54/171 (31.58%), Postives = 91/171 (53.22%), Query Frame = 2 Query: 203 QVHSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVF 715 +VH+H+IK L + + + L + V + + N W ++ YSQ E T+F ++R + P+++TF V+ +C + G I +++W D +FVG+SL+D+Y K +I AR++F+ +PER+VVS TA+I GYA +G EA +F Sbjct: 73 RVHAHMIKTRYLPATYLRTRLL-IFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMF 242 HSP 2 Score: 77.411 bits (189), Expect = 1.045e-13 Identity = 52/185 (28.11%), Postives = 87/185 (47.03%), Query Frame = 2 Query: 203 QVHSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMPERSNVSWNAL 757 Q+H I+K + H V + ++ A + + +F + + ++ GY+Q E +F RL E P+ T+ ++ A S + + G V+R + + SLID+Y K +S AR++FD MPER +SW AM+VGY+ G E +F LM + V +A+ Sbjct: 174 QIHGLIVKWNYDS-HIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAV 357
BLAST of CX671828 vs. ExPASy Swiss-Prot
Match: PPR65_ARATH (Pentatricopeptide repeat-containing protein At1g31430 OS=Arabidopsis thaliana GN=PCMP-E55 PE=2 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.362e-21 Identity = 69/230 (30.00%), Postives = 116/230 (50.43%), Query Frame = 2 Query: 122 PINFPKPSCLLSALTLIKKCKLQTHLHQVHSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVP-DKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMPERSNVSWNALIGGLVKIGDLRSARQLF 808 P NF P L S L K + + +VH + +K GLE D S V++ + ++ + + VF+ + + WN L+ Y N RF + +F R+ +E + D+ T + ACS + ++ G I V+ + V +G +L+D++ K + AR VFD M ++NV WT+M+ GY S G + EA+ +F+ P + V W A++ G V+ A +LF Sbjct: 44 PDNFTLPVVLKSIGRLRKVIEGE----KVHGYAVKAGLEFD-SYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVT-EFEMSVRIGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELF 267 HSP 2 Score: 93.2041 bits (230), Expect = 1.841e-18 Identity = 45/139 (32.37%), Postives = 75/139 (53.96%), Query Frame = 2 Query: 335 PNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMPERSNVSWN 751 P+ ++N +LK + F +V +F L + PD +T P+V+K+ + V EG + ++ G++ D +V SL+ +Y +I KVFDEMP+R+VVSW +I Y G +A VF M + SN+ ++ Sbjct: 9 PSLLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFEDAIGVFKRMSQESNLKFD 147 HSP 3 Score: 70.0922 bits (170), Expect = 1.669e-11 Identity = 44/143 (30.77%), Postives = 68/143 (47.55%), Query Frame = 2 Query: 314 VFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMPERSNV 742 +F R + LW ++ GY Q +RF E +F + PD + ++ C+ ++ +G I + V D VGT+L+D+Y K I A +VF E+ ER+ SWT++I G A G + DL E NV Sbjct: 235 LFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNG---MSGRALDLYYEMENV 374 The following BLAST results are available for this feature:
BLAST of CX671828 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 193
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX671828 ID=CX671828; Name=CX671828; organism=Citrus sinensis; type=EST; length=813bpback to top |