CX671828
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX671828 vs. ExPASy Swiss-Prot
Match: PP348_ARATH (Pentatricopeptide repeat-containing protein At4g33990 OS=Arabidopsis thaliana GN=EMB2758 PE=2 SV=2) HSP 1 Score: 101.293 bits (251), Expect = 6.761e-21 Identity = 64/210 (30.48%), Postives = 108/210 (51.43%), Query Frame = 2 Query: 164 TLIKKCKLQTHLHQVHSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQ---NSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMPERSNVSWNALIGGLVKIGD 784 TL + C +H+ ++ Q+ + A ++L L ++ + F+ I N + + WN ++ GY + +S I F++F ++ PD TFP V+KAC V+ +G I +++G DV+V SLI LY + K + AR +FDEMP R++ SW AMI GY G+ EA T+ + + +V+ +L+ + GD Sbjct: 59 TLFRYCTNLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGN-VALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLF--MLSSGLTPDYRTFPSVLKACRTVI---DGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAMDSVTVVSLLSACTEAGD 262 HSP 2 Score: 83.9593 bits (206), Expect = 1.117e-15 Identity = 54/206 (26.21%), Postives = 98/206 (47.57%), Query Frame = 2 Query: 206 VHSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWG-VDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMPERSNV-----SWNALIGGLVKIGDLRSARQL 805 +HS+ IK GLE + + I L L VF+R+ + WN+++K Y N + + ++F + PD T + S + +R ++Q +R G ED+ +G +++ +Y K + AR VF+ +P +V+SW +I GYA G EA ++++M E + +W +++ + G LR +L Sbjct: 269 IHSYSIKHGLESELFVSNKLIDLYAEFGR-LRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKL 473 HSP 3 Score: 80.8777 bits (198), Expect = 9.456e-15 Identity = 55/195 (28.21%), Postives = 97/195 (49.74%), Query Frame = 2 Query: 149 LLSALTLIKKCKLQTHLHQVHSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQN---SRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLM 724 +LS L I+ C+ V ++KG + + + + + ++ + + AVFN + N + WNT++ GY+QN S IE++ I E ++ T+ V+ ACS ++R+G + +++ G+ DVFV TSL D+YGK + A +F ++P N V W +I + G +A +F M Sbjct: 357 ILSQLGDIRACR------SVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEE--EGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEM 543 HSP 4 Score: 73.9442 bits (180), Expect = 1.156e-12 Identity = 53/218 (24.31%), Postives = 102/218 (46.79%), Query Frame = 2 Query: 164 TLIKKCKLQTHLHQVHSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMP----ERSNVSWNALIGGLVKIGDLRSARQL 805 +++K C+ +++H +K G D + A I L +S + + +F+ + + WN ++ GY Q+ E T+ L D T ++ AC+ G I + I+ G++ ++FV LIDLY + + +KVFD M R+++SW ++I Y + A ++F M + ++ +L L ++GD+R+ R + Sbjct: 158 SVLKACRTVIDGNKIHCLALKFGFMWDVYVAASLIHL-YSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGL----RAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSV 370
BLAST of CX671828 vs. ExPASy Swiss-Prot
Match: PP308_ARATH (Pentatricopeptide repeat-containing protein At4g14050, mitochondrial OS=Arabidopsis thaliana GN=PCMP-H13 PE=2 SV=3) HSP 1 Score: 100.908 bits (250), Expect = 8.830e-21 Identity = 62/220 (28.18%), Postives = 112/220 (50.91%), Query Frame = 2 Query: 152 LSALTLIKKCKLQTHLHQVHSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAV-PDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMPERSNVSWNALIGGLVKIGDLRSARQLF 808 L L L + + T +H+HI+K G+ Q L +++ + S++ VF+ + + + W ++L +Q + + ++F + + PD + F ++KAC+++ S+ G + I D V +SL+D+Y K ++ A+ VFD + +N +SWTAM+ GYA G EA +F ++P ++ SW ALI G V+ G A +F Sbjct: 7 LHQLQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNV-YGKCGAASHALQVFDEMPHRDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVF 225 HSP 2 Score: 92.4337 bits (228), Expect = 3.140e-18 Identity = 49/162 (30.25%), Postives = 85/162 (52.47%), Query Frame = 2 Query: 338 NTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEA-VPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMPER----SNVSWNALIGGLVKIGDLRSARQLF 808 N + W L+ G+ Q+ + +E F++F + RE + D ++ AC+++ + G + VI G D VF+ +LID+Y K ++ A+ +F M R+VVSWT++IVG A G +A ++D M + V++ LI +G + R+LF Sbjct: 201 NLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELF 362
BLAST of CX671828 vs. ExPASy Swiss-Prot
Match: PP253_ARATH (Putative pentatricopeptide repeat-containing protein At3g25060, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E96 PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 8.830e-21 Identity = 61/213 (28.64%), Postives = 110/213 (51.64%), Query Frame = 2 Query: 182 KLQTHLHQVHSHIIKKG-LEQDHSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMPE----RSNVSWNALIGGLVKIGDLRSARQL 805 KL+ H+ Q+H+ +I G L S+ I+ C + +SY+ VF+ + ++N+++ YS+ EV ++ ++I E+ PD TF + IKAC L + +G A+ + +G DVFV +S+++LY K ++ A +F +M +R+V+ WT M+ G+A G ++A + M R V L+ +GD + R + Sbjct: 28 KLKRHITQIHAFVISTGNLLNGSSISRDLIASCGRIGE-ISYARKVFDELPQRGVSVYNSMIVVYSRGKNPDEVLRLYDQMIAEKIQPDSSTFTMTIKACLSGLVLEKGEAVWCKAVDFGYKNDVFVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGDLGDTKMGRSV 239 HSP 2 Score: 70.4774 bits (171), Expect = 1.278e-11 Identity = 46/179 (25.70%), Postives = 90/179 (50.28%), Query Frame = 2 Query: 206 VHSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMPERSNV 742 VH ++ + GL + + + + + + ++ VF+R++ W +L+ G++QN + F V + PD T V+ ACS V S++ G + +++ V + V T+L+D+Y K +S +R++F+ + +++V W MI Y G+ E ++F M E SN+ Sbjct: 239 VHGYLYRTGLPMNVVVETSLVDMYAKVGF-IEVASRVFSRMMFKTAVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKRHVLDRV-TATALMDMYSKCGALSSSREIFEHVGRKDLVCWNTMISCYGIHGNGQEVVSLFLKMTE-SNI 414
BLAST of CX671828 vs. ExPASy Swiss-Prot
Match: PP220_ARATH (Pentatricopeptide repeat-containing protein At3g09040, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E88 PE=2 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 8.830e-21 Identity = 59/205 (28.78%), Postives = 108/205 (52.68%), Query Frame = 2 Query: 206 VHSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMPER----SNVSWNALIGGLVKIGDLRSARQLF 808 VHS + G++ + L + L ++ +SY+ F+ + + WN++L YS + +V FV L + P+K+TF +V+ C+ +V G I ++I+ G++ + + G +L+D+Y K IS AR+VF+ + + N V WT + GY G EA VF+ M + ++++ +I +++G L+ AR LF Sbjct: 82 VHSKSLILGIDSEGRLGNAIVDL-YAKCAQVSYAEKQFD-FLEKDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLF 284 HSP 2 Score: 100.908 bits (250), Expect = 8.830e-21 Identity = 61/225 (27.11%), Postives = 113/225 (50.22%), Query Frame = 2 Query: 164 TLIKKCKLQTHLH---QVHSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTF-LWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPER-NVVSWTAMIVGYASVGDLVEAKTVFDLMPER----SNVSWNALIGGLVKIGDLRSARQLFD 811 T+++ C L Q H I K+G + + + + + ++ + A+F+ + +P + LW ++ G+SQN + E + + + +PD+ TF V++ CS + S+REG AI + + D D +LID+Y K ++ + +VFDEM R NVVSW ++I GYA G +A +FD M + +++ ++ G + R++F+ Sbjct: 634 TIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFE 858 HSP 3 Score: 96.6709 bits (239), Expect = 1.665e-19 Identity = 61/177 (34.46%), Postives = 93/177 (52.54%), Query Frame = 2 Query: 203 QVHSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMPER 733 Q HS IIKK L ++ V + + ++ L + +F R+ + + WNT++ Y Q+ E F +F R+ V D +KAC+HV + +G + ++ G+D D+ G+SLID+Y K I ARKVF +PE +VVS A+I GY S +L EA +F M R Sbjct: 449 QFHSIIIKKKLAKN-LFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGY-SQNNLEEAVVLFQEMLTR 623 HSP 4 Score: 82.0333 bits (201), Expect = 4.244e-15 Identity = 48/190 (25.26%), Postives = 94/190 (49.47%), Query Frame = 2 Query: 206 VHSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMPERSNVSWNALIGGLVK 775 VH+ IK GL + + + +S+ +S + + VF + N WN +++GY+ N +V +F+ + D +TF ++ C+ + G+ + +I+ + +++FVG +L+D+Y K + AR++F+ M +R+ V+W +I Y + EA +F M VS A + +K Sbjct: 349 VHAEAIKLGLASNIYVGSSLVSM-YSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLK 537 HSP 5 Score: 75.0998 bits (183), Expect = 5.188e-13 Identity = 51/203 (25.12%), Postives = 90/203 (44.33%), Query Frame = 2 Query: 143 SCLLSALTLIKKCKLQTHLHQVHSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMPERSNVSWN 751 +CL S K L V + +G DH I+ L L + +F + +P+ WN ++ G+ + F + + + T V+ A V ++ G + A I+ G+ +++VG+SL+ +Y K +++ A KVF+ + E+N V W AMI GYA G E+ V +L + + +N Sbjct: 230 TCLFSGYV---KAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGK-LKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNG---ESHKVMELFMDMKSSGYN 425
BLAST of CX671828 vs. ExPASy Swiss-Prot
Match: PP398_ARATH (Pentatricopeptide repeat-containing protein At5g27110 OS=Arabidopsis thaliana GN=PCMP-E14 PE=2 SV=2) HSP 1 Score: 100.523 bits (249), Expect = 1.153e-20 Identity = 63/193 (32.64%), Postives = 98/193 (50.78%), Query Frame = 2 Query: 161 LTLIKKCKLQT----HLHQVHSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIR-EEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLM 724 L+L+++C T + VH I+ GL +D L I++ + S N + + ++WN+L+ GYS+NS F + +F RL+ VPD +TFP VIKA + G I V++ G DV V +SL+ +Y K + +VFDEMPER+V SW +I + G+ +A +F M Sbjct: 7 LSLLRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRM 199 HSP 2 Score: 88.5817 bits (218), Expect = 4.535e-17 Identity = 54/174 (31.03%), Postives = 84/174 (48.28%), Query Frame = 2 Query: 203 QVHSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLM 724 ++H +KKG E D + + + + + L + VF ++ + WN+++KGY I R+I E P + T ++ ACS ++ G I VIR V+ D++V SLIDLY K E + A VF + + SW MI Y SVG+ +A V+D M Sbjct: 229 EIHRKCVKKGFELDEYVNSALVDM-YGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQM 401 HSP 3 Score: 87.4261 bits (215), Expect = 1.010e-16 Identity = 51/198 (25.76%), Postives = 100/198 (50.51%), Query Frame = 2 Query: 98 LPNCSRSAPINFPKPSCLLSALTLIKKCKLQTHLHQVHSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGD 691 L NCS P +F P+ + + L ++ + +H+ ++K G D + + + + ++ S VF+ + + WNT++ + Q+ + +F R+ P+ + + I ACS +L + G I ++ G + D +V ++L+D+YGK + AR+VF +MP +++V+W +MI GY + GD Sbjct: 97 LLNCSICVPDSFTFPNVIKAYGALGREFLGR----MIHTLVVKSGYVCDVVVASSLVGM-YAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGD 289 HSP 4 Score: 79.337 bits (194), Expect = 2.751e-14 Identity = 48/197 (24.37%), Postives = 91/197 (46.19%), Query Frame = 2 Query: 134 PKPSCLLSALTLIKKCKLQTHLHQVHSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLM 724 P + L S L + + H +H ++I+ + D + I L + + VF++ WN ++ Y + + ++ +++ PD TF V+ ACS + ++ +G I ++ ++ D + ++L+D+Y K A ++F+ +P+++VVSWT MI Y S G EA FD M Sbjct: 307 PSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEA-NLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEM 502
BLAST of CX671828 vs. ExPASy Swiss-Prot
Match: PPR8_ARATH (Pentatricopeptide repeat-containing protein At1g03540 OS=Arabidopsis thaliana GN=PCMP-E4 PE=2 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.506e-20 Identity = 62/218 (28.44%), Postives = 109/218 (50.00%), Query Frame = 2 Query: 164 TLIKKC-KLQTHLH--QVHSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMPERSNVSWNALIGG--LVKIGDLRSARQ 802 +L++ C K+ + +H Q H+H++K GLE D ++ +SL L + + VF+ + W +++ GY ++ +FV ++ +++T +KACS + VR G VI G + + F+ ++L LYG +E AR+VFDEMPE +V+ WTA++ ++ EA +F M + + G L G+LR +Q Sbjct: 66 SLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLLSLYFKLGPGMRETRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQ 283 HSP 2 Score: 95.9005 bits (237), Expect = 2.840e-19 Identity = 55/200 (27.50%), Postives = 103/200 (51.50%), Query Frame = 2 Query: 209 HSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEA-VPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMPERSNVSWNALIGGLVKIGDLRSARQL 805 H +I G E +H + + L P+ + VF+ + P+ W +L +S+N + E +F + R + VPD TF V+ AC ++ +++G I +I G+ +V V +SL+D+YGK + AR+VF+ M ++N VSW+A++ GY G+ +A +F M E+ + ++ + +R +++ Sbjct: 186 HGVVITHGFEWNHFISSTLAYLYGVNREPVD-ARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREMEEKDLYCFGTVLKACAGLAAVRLGKEI 384 HSP 3 Score: 87.4261 bits (215), Expect = 1.010e-16 Identity = 55/177 (31.07%), Postives = 90/177 (50.85%), Query Frame = 2 Query: 203 QVHSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMPER 733 ++H +I G+ + + + + + + + + VFN + N+ W+ LL GY QN + IF RE D Y F V+KAC+ + +VR G I +R G +V V ++LIDLYGK I A +V+ +M RN+++W AM+ A G EA + F+ M ++ Sbjct: 286 EIHGKLITNGIGSNVVVESSLLDM-YGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIF----REMEEKDLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKK 457
BLAST of CX671828 vs. ExPASy Swiss-Prot
Match: PP357_ARATH (Pentatricopeptide repeat-containing protein At4g39530 OS=Arabidopsis thaliana GN=PCMP-E52 PE=1 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.506e-20 Identity = 62/190 (32.63%), Postives = 99/190 (52.11%), Query Frame = 2 Query: 164 TLIKKCKLQTHLH---QVHSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVG---DLVEAKTVF 715 T++ C + L Q+H+HI++ GLE D SL+ I ++ + +FN + N N W TLL GY QN+ E +F + + PD Y ++ +C+ + ++ GT + A I+ + D +V SLID+Y K ++ ARKVFD +VV + AMI GY+ +G +L EA +F Sbjct: 254 TVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIA-AHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIF 442 HSP 2 Score: 89.7373 bits (221), Expect = 2.036e-17 Identity = 50/174 (28.74%), Postives = 87/174 (50.00%), Query Frame = 2 Query: 203 QVHSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLM 724 Q+ S ++K G ++D + I + + Y+ VF+ + +T W T++ G + R +F +L+ + VPD Y V+ ACS + + G I A ++R+G++ D + LID Y K + A K+F+ MP +N++SWT ++ GY EA +F M Sbjct: 169 QLQSFLVKSGFDRDVYVGTLLIDF-YLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSM 341 HSP 3 Score: 82.8037 bits (203), Expect = 2.488e-15 Identity = 57/210 (27.14%), Postives = 102/210 (48.57%), Query Frame = 2 Query: 104 NCSRSAPINFPKPSCLLSALTLIKKCKLQTHL---HQVHSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLM 724 N R +PS LL+ ++L++ T L Q+H + K GL D + I + +S L S VF+ + + +WN++ GY Q S E +F+ L PD++TF ++ A ++ SV+ G +++ G++ + ++ +L+D+Y K A K FD R+VV W ++I YA+ G+ +A + + M Sbjct: 440 NIFRDMRFRLIRPS-LLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDV-YSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKM 647
BLAST of CX671828 vs. ExPASy Swiss-Prot
Match: PPR52_ARATH (Pentatricopeptide repeat-containing protein At1g19720 OS=Arabidopsis thaliana GN=DYW7 PE=2 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.967e-20 Identity = 50/164 (30.49%), Postives = 85/164 (51.83%), Query Frame = 2 Query: 329 VNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMPE---RSN-VSWNALIGGLVKIGDLRSARQLF 808 + + F W ++ G N + +F ++ VP+ T + ACS + + +G+ + + ++ G +DV VG SL+D+Y K ++ ARKVFD + ++V +W +MI GY G +A +F M + R N ++WN +I G +K GD A LF Sbjct: 313 ITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLF 476 HSP 2 Score: 95.5153 bits (236), Expect = 3.710e-19 Identity = 50/168 (29.76%), Postives = 91/168 (54.17%), Query Frame = 2 Query: 314 VFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMPER----SNVSWNALIGGLVKIGDLRSARQL 805 VF+ + N F W+ ++ YS+ +R+ EV +F ++++ +PD + FP +++ C++ V G I + VI+ G+ + V S++ +Y K E+ A K F M ER+V++W ++++ Y G EA + M + V+WN LIGG ++G +A L Sbjct: 137 VFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDL 304 HSP 3 Score: 72.7886 bits (177), Expect = 2.575e-12 Identity = 45/166 (27.11%), Postives = 81/166 (48.80%), Query Frame = 2 Query: 329 VNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLM------PERSNVSWNALIGGLVKIGDLRSARQLF 808 V NT WN ++ GY QN + E +F ++ +P+ T ++ AC+++L + I V+R +D V +L D Y K +I +R +F M +++++W ++I GY G A +F+ M P R +S L GL +G++ +++F Sbjct: 485 VQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILAHGL--MGNVDEGKKVF 648
BLAST of CX671828 vs. ExPASy Swiss-Prot
Match: PP181_ARATH (Pentatricopeptide repeat-containing protein At2g33680 OS=Arabidopsis thaliana GN=PCMP-E19 PE=2 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.967e-20 Identity = 68/203 (33.50%), Postives = 103/203 (50.74%), Query Frame = 2 Query: 134 PKPSCLLSALTLIKKCKLQTHLHQVHSHIIKKGLE---QDHSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIRE----EAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDL 721 P S LL LT + + VH II+ G Q +++ +F + C LA S +FN I+ + WN+L+ GYSQN +T+ ++L RE + +P+ YT + KA S + S G A V++ D++V TSL+ +Y K + KVF MPERN +W+ M+ GYA+ G + EA VF+L Sbjct: 12 PHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHS----IFNAIICKDVVSWNSLITGYSQNGGISSSYTV-MQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNL 209 HSP 2 Score: 96.2857 bits (238), Expect = 2.175e-19 Identity = 55/180 (30.56%), Postives = 94/180 (52.22%), Query Frame = 2 Query: 203 QVHSHIIKKGLEQDHSLVAHFISLCHSLAT------PLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLM 724 Q+H IK GL F++L ++L T L+ + +F+ + N+ W+ ++ GYSQN +E +F R+ P +YT V+ ACS + + EG + + +++ G + +F T+L+D+Y K ++ ARK FD + ER+V WT++I GY D EA ++ M Sbjct: 242 QIHCITIKNGL-------LGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRM 414 HSP 3 Score: 81.2629 bits (199), Expect = 7.240e-15 Identity = 51/174 (29.31%), Postives = 87/174 (50.00%), Query Frame = 2 Query: 203 QVHSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLM 724 Q+HS ++K G E+ H + ++ A L+ + F+ + + LW +L+ GY QNS E ++ R+ +P+ T V+KACS + ++ G + I+ G +V +G++L +Y K + VF P ++VVSW AMI G + G EA +F+ M Sbjct: 343 QLHSFLLKLGFER-HLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEM 515 HSP 4 Score: 78.9518 bits (193), Expect = 3.593e-14 Identity = 44/140 (31.43%), Postives = 77/140 (55.00%), Query Frame = 2 Query: 314 VFNRIVNPNTFLWNTLLKGYSQNSRF---IEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLM 724 VF + NT+ W+T++ GY+ R I+VF +F+R +EE Y F V+ + + + V G I I+ G+ V + +L+ +Y K + ++ A K+FD +RN ++W+AM+ GY+ G+ +EA +F M Sbjct: 175 VFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLRE-KEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRM 313
BLAST of CX671828 vs. ExPASy Swiss-Prot
Match: PP429_ARATH (Putative pentatricopeptide repeat-containing protein At5g52630 OS=Arabidopsis thaliana GN=PCMP-H52 PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.569e-20 Identity = 53/171 (30.99%), Postives = 90/171 (52.63%), Query Frame = 2 Query: 203 QVHSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVF 715 Q+H +++K GL + + I+ P S F ++ W++++ ++QN +++ PD + P K+C+ + G ++ ++ G D DVFVG+SL+D+Y K EI ARK+FDEMP+RNVV+W+ M+ GYA +G+ EA +F Sbjct: 36 QLHGYVVKSGLSLIPLVANNLINFYSKSQLPFD-SRRAFEDSPQKSSTTWSSIISCFAQNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLF 205 HSP 2 Score: 73.559 bits (179), Expect = 1.510e-12 Identity = 43/158 (27.22%), Postives = 76/158 (48.10%), Query Frame = 2 Query: 206 VHSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYA 679 VH +K G + D + + + + ++ + Y+ +F+ + N W+ ++ GY+Q E +F + E + Y+F VI C++ + G I I+ D FVG+SL+ LY K A +VF+E+P +N+ W AM+ YA Sbjct: 138 VHCLSMKTGYDADVFVGSSLVDM-YAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYA 294 The following BLAST results are available for this feature:
BLAST of CX671828 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 193
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Sequences
The
following sequences are available for this feature:
EST sequence >CX671828 ID=CX671828; Name=CX671828; organism=Citrus sinensis; type=EST; length=813bpback to top |