CX671828

Overview
NameCX671828
Unique NameCX671828
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length813
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5099 contig Csv1_Contig5099:1..813. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX671828 vs. ExPASy Swiss-Prot
Match: PP147_ARATH (Pentatricopeptide repeat-containing protein At2g03880, mitochondrial OS=Arabidopsis thaliana GN=PCMP-H44 PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.569e-20
Identity = 53/187 (28.34%), Postives = 105/187 (56.15%), Query Frame = 2
Query:  164 TLIKKCKLQTHLHQVHSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLM 724
            ++++ C   + +  +H  IIK+GLE D  + +  I +   L  P   + +VF+ +V  +  +WN+++ G++QNSR      +F R+ R   + ++ T   V++AC+ +  +  G      ++++  D+D+ +  +L+D+Y K   +  A +VF++M ER+V++W+ MI G A  G   EA  +F+ M
Sbjct:  167 SVLRSCNGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPED-ALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKY--DQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERM 350          

HSP 2 Score: 73.9442 bits (180), Expect = 1.156e-12
Identity = 40/154 (25.97%), Postives = 80/154 (51.95%), Query Frame = 2
Query:  314 VFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMPERSNVSWNALIGGLVK 775
            +F+++   N   W T++  YS+     +   + V ++R+   P+ YT+  V+++C+ +  VR    +   +I+ G++ DVFV ++LID++ K  E   A  VFDEM   + + W ++I G+A       A  +F  M     ++  A +  +++
Sbjct:  118 LFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDVR---MLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLR 268          
BLAST of CX671828 vs. ExPASy Swiss-Prot
Match: PPR80_ARATH (Pentatricopeptide repeat-containing protein At1g53600, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E63 PE=2 SV=2)

HSP 1 Score: 98.9821 bits (245), Expect = 3.355e-20
Identity = 55/189 (29.10%), Postives = 97/189 (51.32%), Query Frame = 2
Query:  311 AVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVP-DKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGK-------------------------------RKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMPERSNVSWNALIGGLVKIG 781
            ++F+R+   N   W  ++ GY +   F + F +F+R+ +E  V  +  T  ++ KAC   +  REG+ I   V R  ++ D+F+G SL+ +Y K                               RK+IS A ++F++MP +++VSWT MI G++  G++ +   +F +MPE+ N++W A+I   V  G
Sbjct:  229 SLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNITWTAMISAFVSNG 417          

HSP 2 Score: 75.8702 bits (185), Expect = 3.042e-13
Identity = 43/166 (25.90%), Postives = 82/166 (49.40%), Query Frame = 2
Query:  296 LSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLM----PERSNVSWNALIGGLVKIG 781
            +S    +F  +   +   W  ++  +  N  + E    F +++++E  P+ YTF  V+ A + +  + EG  I   V++  +  D+ V  SL+ +Y K    + A K+F  + E N+VS+  MI GY+  G   +A  +F ++     E + V++ AL+   V +G
Sbjct:  388 ISKCVELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVG 553          
BLAST of CX671828 vs. ExPASy Swiss-Prot
Match: PP353_ARATH (Pentatricopeptide repeat-containing protein At4g37170 OS=Arabidopsis thaliana GN=PCMP-H5 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 3.355e-20
Identity = 65/231 (28.14%), Postives = 114/231 (49.35%), Query Frame = 2
Query:   32 LTPMPKIDEPNTPCKHKSCSSMLPNCSRSAPINFPKPSCLLSALTLIKKCKLQTHLHQVHSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLM 724
            +T   K D+P       S    +PN SR             +A+  I++ K      ++H HI++ GL+ D  L +  + + +     +  +  +F++IV  +   W +++  Y ++SR+ E F++F  L+     P++YTF  V+ AC+ + +   G  +   + R G D   F  +SL+D+Y K   I  A+ V D  P+ ++VSWT++I G A  G   EA   FDL+
Sbjct:  189 VTGYVKKDQPEEALVLYSLMQRVPN-SRPNIFTVSIAVAAAAAVKCIRRGK------EIHGHIVRAGLDSDEVLWSSLMDM-YGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLL 411          

HSP 2 Score: 89.3521 bits (220), Expect = 2.659e-17
Identity = 57/202 (28.22%), Postives = 92/202 (45.54%), Query Frame = 2
Query:  197 LHQVHSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIF---------VRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMPERSNVSWNALIGGLVK 775
            L  +H  I+K+ L   H+ +  F                   +  NPN      +++   + +RF E   +          V+L+     P   T+  +I+ CS   ++ EG  +   +   G    + +   L+ +Y K   +  ARKVFDEMP R++ SW  M+ GYA VG L EA+ +FD M E+ + SW A++ G VK
Sbjct:    9 LTTLHGFILKRNLSSFHASLKRFSD----------------KKFFNPNHEDGGVVVERLCRANRFGEAIDVLCGQKLLREAVQLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVK 194          
BLAST of CX671828 vs. ExPASy Swiss-Prot
Match: PP277_ARATH (Pentatricopeptide repeat-containing protein At3g50420 OS=Arabidopsis thaliana GN=PCMP-E85 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 3.355e-20
Identity = 60/164 (36.59%), Postives = 87/164 (53.05%), Query Frame = 2
Query:  314 VFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAV-PDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMPERSN----VSWNALIGGLVKIGDLR 790
            VF RI NPN   WN+++ G S+N    +   ++ RL+R     PD+YTF   I A +       G  +   V + G +  VFVGT+L+ +Y K +E   A+KVFD M ER+VV WT MIVG++ +G+   A   F  M    N     S +++IG    +  LR
Sbjct:  357 VFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGFSLSSVIGACSDMAMLR 520          

HSP 2 Score: 74.3294 bits (181), Expect = 8.850e-13
Identity = 53/224 (23.66%), Postives = 109/224 (48.66%), Query Frame = 2
Query:  155 SALTLIKKCKLQTHL---HQVHSHIIKKGLEQ-------DHSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIE-VFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLM----PERSNVSWNALIGGLVKIG 781
            S + L +KC   T L    Q+H+ ++  G          +++L++ ++  C SL      +  VF+++ + N   +N L   YS+N  F    F +   +  E   P+  TF  +++ C+ +  V  G+++ + +I+ G  ++V V TS++ +Y    ++  AR++FD +  R+ V+W  MIVG      + +    F  M     + +  +++ ++ G  K+G
Sbjct:   96 SVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISMYVR-CGSL----EQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLG 314          
BLAST of CX671828 vs. ExPASy Swiss-Prot
Match: PPR45_ARATH (Pentatricopeptide repeat-containing protein At1g15510, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H73 PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 5.723e-20
Identity = 54/169 (31.95%), Postives = 88/169 (52.07%), Query Frame = 2
Query:  314 VFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAV-PDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVF----DLMPERSNVSWNALIGGLVKIGDLRSARQL 805
            VF ++   N F WN L+ GY++   F E   ++ R++    V PD YTFP V++ C  +  +  G  +   V+R+G + D+ V  +LI +Y K  ++  AR +FD MP R+++SW AMI GY   G   E   +F     L  +   ++  ++I     +GD R  R +
Sbjct:  151 VFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDI 319          

HSP 2 Score: 77.0258 bits (188), Expect = 1.365e-13
Identity = 56/205 (27.32%), Postives = 93/205 (45.37%), Query Frame = 2
Query:  203 QVHSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMPERS----NVSWNALIGGLVKIGDLRSARQL 805
            +VH H+++ G E D  +V   I++ +     +  +  +F+R+   +   WN ++ GY +N    E   +F  +      PD  T   VI AC  +   R G  I A VI  G   D+ V  SL  +Y        A K+F  M  +++VSWT MI GY       +A   + +M + S     ++  A++     +GDL +  +L
Sbjct:  217 EVHVHVVRYGYELDIDVVNALITM-YVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVEL 420          

HSP 3 Score: 73.1738 bits (178), Expect = 1.972e-12
Identity = 54/231 (23.38%), Postives = 103/231 (44.59%), Query Frame = 2
Query:  149 LLSALTLIKKCKLQTHLH---QVHSHIIKKGLEQDHSLVAHFISLCHSL------ATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMP---ERSNVSWNALIGGLVKIGDLRSARQL 805
            L++  ++I  C+L         +H+++I  G   D       IS+C+SL      A     +  +F+R+   +   W T++ GY  N    +    +  + ++   PD+ T   V+ AC+ +  +  G  +    I+  +   V V  +LI++Y K K I  A  +F  +P +NV+SWT++I G        EA      M    + + ++  A +    +IG L   +++
Sbjct:  297 LMTLTSVISACELLGDRRLGRDIHAYVITTGFAVD-------ISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQMKMTLQPNAITLTAALAACARIGALMCGKEI 520          
BLAST of CX671828 vs. ExPASy Swiss-Prot
Match: PPR71_ARATH (Pentatricopeptide repeat-containing protein At1g34160 OS=Arabidopsis thaliana GN=PCMP-H68 PE=2 SV=2)

HSP 1 Score: 97.8265 bits (242), Expect = 7.475e-20
Identity = 63/226 (27.88%), Postives = 108/226 (47.79%), Query Frame = 2
Query:  164 TLIKKCKLQTHLHQVHSHIIKKGLEQDHSLVAHFISLCH-SLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVP------DKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMP----ERSNVSWNALIGGLVKIGDLRSARQLF 808
            T+I+KC   + + Q+ SH +  G  Q   L +  +  C  S    LS++  +F  I  P T  WN +++G++ +S     F+ +  ++++ +        D  T    +KAC+  L       +   + R G+  D  + T+L+D Y K  ++  A K+FDEMP R+V SW A+I G  S     EA  ++  M      RS V+  A +G    +GD++    +F
Sbjct:    8 TMIQKCVSFSQIKQLQSHFLTAGHFQSSFLRSRLLERCAISPFGDLSFAVQIFRYIPKPLTNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFTLKACARALCSSAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGENIF 233          

HSP 2 Score: 72.7886 bits (177), Expect = 2.575e-12
Identity = 67/246 (27.24%), Postives = 114/246 (46.34%), Query Frame = 2
Query:   92 SMLPNCSRSAPINFPKPSCLLSALTL---IKKCK---LQTHLHQVHSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMP-ERNVVSWTAMIVGYASVGDLVEAKTVFDLMPER----SNVSWNALI-----GGLVKIG 781
            SML   S S+ I      C + ALT    +K C      + + Q+H  I ++GL  D SL+   +   +S    L  +  +F+ +   +   WN L+ G    +R  E   ++ R+  E     + T    + ACSH+  V+EG  I         +++V V  + ID+Y K   +  A +VF++   +++VV+W  MI G+A  G+   A  +FD + +      +VS+ A +      GLV+ G
Sbjct:   93 SMLQQSSSSSAI------CRVDALTCSFTLKACARALCSSAMDQLHCQINRRGLSAD-SLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGENI----FHGYSNDNVIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNGIKPDDVSYLAALTACRHAGLVEYG 327          
BLAST of CX671828 vs. ExPASy Swiss-Prot
Match: PP271_ARATH (Putative pentatricopeptide repeat-containing protein At3g49140 OS=Arabidopsis thaliana GN=PCMP-H77 PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 7.475e-20
Identity = 73/230 (31.74%), Postives = 104/230 (45.22%), Query Frame = 2
Query:  197 LHQVHSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYA----------------SVGDLVEAKTVFDLMPERSN---------------------VSWNALIGGLVK 775
            L  VHS II + L  + SL    +    SL    S +  VF+ I   N  + N +++ Y  N  + E   +F  +      PD YTFP V+KACS   ++  G  I  +  + G+   +FVG  L+ +YGK   +S AR V DEM  R+VVSW +++VGYA                SV    +A T+  L+P  SN                     VSWN +IG  +K
Sbjct:   58 LRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVAS-ARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIGVYMK 286          
BLAST of CX671828 vs. ExPASy Swiss-Prot
Match: PP128_ARATH (Pentatricopeptide repeat-containing protein At1g77170 OS=Arabidopsis thaliana GN=PCMP-E21 PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 7.475e-20
Identity = 68/197 (34.52%), Postives = 101/197 (51.27%), Query Frame = 2
Query:  245 HSLVAHFISLCHSLATPLSYSTAVF-NRIVN--PNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVF------DLMPER-SNVSWNALIGGLVKIGDLRSARQL 805
            + L+A  +S C SLA        +F +RI++  P  FLWN +++ Y ++   ++   +++ ++R   +PD+Y+ P+VIKA   +     G  + +  +R G   D F  +  I LY K  E   ARKVFDE PER + SW A+I G    G   EA  +F       L P+  + VS  A  GGL   GDL  A QL
Sbjct:   47 NKLLATLLSNCTSLARVRRIHGDIFRSRILDQYPIAFLWNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAVQIHDFTLGKELHSVAVRLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLEPDDFTMVSVTASCGGL---GDLSLAFQL 240          

HSP 2 Score: 86.6557 bits (213), Expect = 1.723e-16
Identity = 59/197 (29.95%), Postives = 97/197 (49.24%), Query Frame = 2
Query:  158 ALTLIKKCKLQTHLH----QVHSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDE--DVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMPE 730
            +L ++ K  +Q H      ++HS  ++ G   D    + FI+L +  A     +  VF+         WN ++ G +   R  E   +FV + R    PD +T   V  +C  +  +     +   V++   +E  D+ +  SLID+YGK   +  A  +F+EM +RNVVSW++MIVGYA+ G+ +EA   F  M E
Sbjct:  119 SLPIVIKAAVQIHDFTLGKELHSVAVRLGFVGDEFCESGFITL-YCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMRE 314          
BLAST of CX671828 vs. ExPASy Swiss-Prot
Match: PP111_ARATH (Putative pentatricopeptide repeat-containing protein At1g69350, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E66 PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 7.475e-20
Identity = 58/199 (29.15%), Postives = 107/199 (53.77%), Query Frame = 2
Query:  134 PKPSCLLSALTLIKKCKLQTHLHQVHSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMPE 730
            P    L S+++  +   L     Q+H H+I+  +  +   V + +   +S +  +  ++ VFN+I + +   WN++L G+SQN   +E  ++F  +       ++ TF  VI+ACS + S+ +G  +   +I  G+ +D+F  T+LID+Y K  +++ A  VF  M  R++VSW++MI  Y   G +  A + F+ M E
Sbjct:  403 PDAFTLASSISACENAGLVPLGKQIHGHVIRTDVSDE--FVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGL-KDLFTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVE 598          

HSP 2 Score: 96.2857 bits (238), Expect = 2.175e-19
Identity = 66/223 (29.60%), Postives = 114/223 (51.12%), Query Frame = 2
Query:  161 LTLIKKCKLQTHLHQVHSHIIKKG-LEQDHSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACS---HVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLM----PERSNVSWNALIGGLVKIGDLRSARQL 805
            + L + C     + Q+H+H++  G L +D   V   I     + +P S S  VF     P++F++  L+K             ++ RL+ E     K+ FP V++AC+     LSV  G  +   +I+ GVD+D  + TSL+ +YG+   +S A KVFD MP R++V+W+ ++      G++V+A  +F  M     E   V+  +++ G  ++G LR AR +
Sbjct:    5 MPLFRSCSSLRLVSQLHAHLLVTGRLRRDPLPVTKLIESYAFMGSPDS-SRLVFEAFPYPDSFMYGVLIKCNVWCHLLDAAIDLYHRLVSETTQISKFVFPSVLRACAGSREHLSV--GGKVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSV 224          

HSP 3 Score: 94.3597 bits (233), Expect = 8.264e-19
Identity = 60/224 (26.79%), Postives = 112/224 (50.00%), Query Frame = 2
Query:  149 LLSALTLIKKCKLQTHLHQ---VHSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLM----PERSNVSWNALIGGLVKIGDLRSAR 799
            L++  +++  C L   + +   VH   +++ L+ ++  ++  +   ++    LS    V   + + N   WN+L+  Y+     I+   +F +++ +   PD +T    I AC +   V  G  I   VIR  V ++ FV  SLID+Y K   +  A  VF+++  R+VV+W +M+ G++  G+ VEA ++FD M     E + V++ A+I     IG L   +
Sbjct:  303 LVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDVSDE-FVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGK 525          

HSP 4 Score: 72.0182 bits (175), Expect = 4.392e-12
Identity = 39/158 (24.68%), Postives = 80/158 (50.63%), Query Frame = 2
Query:  203 QVHSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGY 676
            +VH  IIK G++ D  +    + + +     LS +  VF+ +   +   W+TL+    +N   ++   +F  ++ +   PD  T   V++ C+ +  +R   ++   + R   D D  +  SL+ +Y K  ++  + ++F+++ ++N VSWTAMI  Y
Sbjct:  122 KVHGRIIKGGVDDDAVIETSLLCM-YGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSY 278          
BLAST of CX671828 vs. ExPASy Swiss-Prot
Match: PP121_ARATH (Pentatricopeptide repeat-containing protein At1g74600, chloroplastic OS=Arabidopsis thaliana GN=PCMP-E69 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 9.762e-20
Identity = 51/137 (37.23%), Postives = 77/137 (56.20%), Query Frame = 2
Query:  314 VFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLM 724
            VF   ++ N + WNT++ G  +N  +  VF +F  +      PD YT+  V+ AC+ +  +R G  +QA VI+ G  EDVFV T+++DLY K   ++ A +VF  +P  +VVSWT M+ GY    D   A  +F  M
Sbjct:  207 VFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACASLEKLRFGKVVQARVIKCGA-EDVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEM 342          

HSP 2 Score: 82.4185 bits (202), Expect = 3.250e-15
Identity = 46/171 (26.90%), Postives = 90/171 (52.63%), Query Frame = 2
Query:  203 QVHSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVF 715
            QVH + +K GL  D ++ +   +L +S    L  S  +F  I   +   W +++ G+++     E   +F  ++ +   PD+ T   V+  CS   S+  G  I    +R G+D+ + +G++L+++Y K   +  AR+V+D +PE + VS +++I GY+  G + +   +F
Sbjct:  471 QVHGYTLKSGLVLDLTVGSSLFTL-YSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLF 640          

HSP 3 Score: 77.0258 bits (188), Expect = 1.365e-13
Identity = 47/200 (23.50%), Postives = 97/200 (48.50%), Query Frame = 2
Query:  134 PKPSCLLSALTLIKKCKLQTHLHQVHSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMPER 733
            P  S L + LT+           ++H + ++ G+++   L +  +++ +S    L  +  V++R+   +    ++L+ GYSQ+    + F +F  ++      D +    ++KA +       G  + A + + G+  +  VG+SL+ +Y K   I    K F ++   ++++WTA+I  YA  G   EA  V++LM E+
Sbjct:  549 PDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNM-YSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTALIASYAQHGKANEALQVYNLMKEK 747          
The following BLAST results are available for this feature:
BLAST of CX671828 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 193
Match NameE-valueIdentityDescription
PP147_ARATH2.569e-2028.34Pentatricopeptide repeat-containing protein At2g03... [more]
PPR80_ARATH3.355e-2029.10Pentatricopeptide repeat-containing protein At1g53... [more]
PP353_ARATH3.355e-2028.14Pentatricopeptide repeat-containing protein At4g37... [more]
PP277_ARATH3.355e-2036.59Pentatricopeptide repeat-containing protein At3g50... [more]
PPR45_ARATH5.723e-2031.95Pentatricopeptide repeat-containing protein At1g15... [more]
PPR71_ARATH7.475e-2027.88Pentatricopeptide repeat-containing protein At1g34... [more]
PP271_ARATH7.475e-2031.74Putative pentatricopeptide repeat-containing prote... [more]
PP128_ARATH7.475e-2034.52Pentatricopeptide repeat-containing protein At1g77... [more]
PP111_ARATH7.475e-2029.15Putative pentatricopeptide repeat-containing prote... [more]
PP121_ARATH9.762e-2037.23Pentatricopeptide repeat-containing protein At1g74... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_13D05_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-13D05-G9-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671828 ID=CX671828; Name=CX671828; organism=Citrus sinensis; type=EST; length=813bp
GGACAGTGGGCAACTATCCCGCGAGGGAGAGCTAACTCCAATGCCCAAAA
TTGACGAACCAAACACGCCATGCAAGCACAAGTCCTGCTCTTCGATGCTA
CCTAACTGCTCACGATCAGCGCCCATCAACTTCCCAAAACCATCGTGTCT
CCTTTCCGCTTTAACCCTGATAAAGAAGTGCAAACTCCAAACTCACCTCC
ACCAGGTTCACTCTCACATCATCAAAAAGGGCCTCGAGCAAGATCACTCT
CTCGTTGCCCACTTCATCTCGCTGTGTCACTCCCTCGCCACTCCCTTATC
TTACTCTACCGCCGTCTTCAACCGCATTGTCAATCCCAATACTTTTCTTT
GGAACACCCTCTTAAAAGGGTACTCTCAGAATTCTCGTTTTATTGAGGTT
TTTACGATTTTTGTTCGATTGATTAGAGAGGAAGCGGTGCCTGATAAGTA
TACGTTCCCATTGGTAATTAAGGCGTGTTCGCATGTGCTTAGTGTGAGGG
AAGGAACGGCGATTCAAGCTGCTGTAATTAGGTGGGGGGTTGATGAGGAT
GTGTTTGTGGGAACTAGTTTGATTGACTTATATGGGAAACGTAAAGAGAT
TTCTTGCGCCCGTAAAGTGTTCGATGAAATGCCTGAGAGAAATGTTGTTT
CATGGACAGCGATGATTGTTGGATATGCGAGTGTTGGGGATTTGGTGGAA
GCGAAGACGGTTTTTGATTTAATGCCGGAGAGGAGTAATGTTTCATGGAA
TGCTTTGATTGGGGGGTTAGTGAAGATAGGAGATTTGAGAAGTGCTAGGC
AGTTGTTTGATGA
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