CX671828
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX671828 vs. ExPASy Swiss-Prot
Match: PP147_ARATH (Pentatricopeptide repeat-containing protein At2g03880, mitochondrial OS=Arabidopsis thaliana GN=PCMP-H44 PE=2 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.569e-20 Identity = 53/187 (28.34%), Postives = 105/187 (56.15%), Query Frame = 2 Query: 164 TLIKKCKLQTHLHQVHSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLM 724 ++++ C + + +H IIK+GLE D + + I + L P + +VF+ +V + +WN+++ G++QNSR +F R+ R + ++ T V++AC+ + + G ++++ D+D+ + +L+D+Y K + A +VF++M ER+V++W+ MI G A G EA +F+ M Sbjct: 167 SVLRSCNGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPED-ALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKY--DQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERM 350 HSP 2 Score: 73.9442 bits (180), Expect = 1.156e-12 Identity = 40/154 (25.97%), Postives = 80/154 (51.95%), Query Frame = 2 Query: 314 VFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMPERSNVSWNALIGGLVK 775 +F+++ N W T++ YS+ + + V ++R+ P+ YT+ V+++C+ + VR + +I+ G++ DVFV ++LID++ K E A VFDEM + + W ++I G+A A +F M ++ A + +++ Sbjct: 118 LFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDVR---MLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLR 268
BLAST of CX671828 vs. ExPASy Swiss-Prot
Match: PPR80_ARATH (Pentatricopeptide repeat-containing protein At1g53600, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E63 PE=2 SV=2) HSP 1 Score: 98.9821 bits (245), Expect = 3.355e-20 Identity = 55/189 (29.10%), Postives = 97/189 (51.32%), Query Frame = 2 Query: 311 AVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVP-DKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGK-------------------------------RKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMPERSNVSWNALIGGLVKIG 781 ++F+R+ N W ++ GY + F + F +F+R+ +E V + T ++ KAC + REG+ I V R ++ D+F+G SL+ +Y K RK+IS A ++F++MP +++VSWT MI G++ G++ + +F +MPE+ N++W A+I V G Sbjct: 229 SLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNITWTAMISAFVSNG 417 HSP 2 Score: 75.8702 bits (185), Expect = 3.042e-13 Identity = 43/166 (25.90%), Postives = 82/166 (49.40%), Query Frame = 2 Query: 296 LSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLM----PERSNVSWNALIGGLVKIG 781 +S +F + + W ++ + N + E F +++++E P+ YTF V+ A + + + EG I V++ + D+ V SL+ +Y K + A K+F + E N+VS+ MI GY+ G +A +F ++ E + V++ AL+ V +G Sbjct: 388 ISKCVELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVG 553
BLAST of CX671828 vs. ExPASy Swiss-Prot
Match: PP353_ARATH (Pentatricopeptide repeat-containing protein At4g37170 OS=Arabidopsis thaliana GN=PCMP-H5 PE=2 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 3.355e-20 Identity = 65/231 (28.14%), Postives = 114/231 (49.35%), Query Frame = 2 Query: 32 LTPMPKIDEPNTPCKHKSCSSMLPNCSRSAPINFPKPSCLLSALTLIKKCKLQTHLHQVHSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLM 724 +T K D+P S +PN SR +A+ I++ K ++H HI++ GL+ D L + + + + + + +F++IV + W +++ Y ++SR+ E F++F L+ P++YTF V+ AC+ + + G + + R G D F +SL+D+Y K I A+ V D P+ ++VSWT++I G A G EA FDL+ Sbjct: 189 VTGYVKKDQPEEALVLYSLMQRVPN-SRPNIFTVSIAVAAAAAVKCIRRGK------EIHGHIVRAGLDSDEVLWSSLMDM-YGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLL 411 HSP 2 Score: 89.3521 bits (220), Expect = 2.659e-17 Identity = 57/202 (28.22%), Postives = 92/202 (45.54%), Query Frame = 2 Query: 197 LHQVHSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIF---------VRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMPERSNVSWNALIGGLVK 775 L +H I+K+ L H+ + F + NPN +++ + +RF E + V+L+ P T+ +I+ CS ++ EG + + G + + L+ +Y K + ARKVFDEMP R++ SW M+ GYA VG L EA+ +FD M E+ + SW A++ G VK Sbjct: 9 LTTLHGFILKRNLSSFHASLKRFSD----------------KKFFNPNHEDGGVVVERLCRANRFGEAIDVLCGQKLLREAVQLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVK 194
BLAST of CX671828 vs. ExPASy Swiss-Prot
Match: PP277_ARATH (Pentatricopeptide repeat-containing protein At3g50420 OS=Arabidopsis thaliana GN=PCMP-E85 PE=2 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 3.355e-20 Identity = 60/164 (36.59%), Postives = 87/164 (53.05%), Query Frame = 2 Query: 314 VFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAV-PDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMPERSN----VSWNALIGGLVKIGDLR 790 VF RI NPN WN+++ G S+N + ++ RL+R PD+YTF I A + G + V + G + VFVGT+L+ +Y K +E A+KVFD M ER+VV WT MIVG++ +G+ A F M N S +++IG + LR Sbjct: 357 VFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGFSLSSVIGACSDMAMLR 520 HSP 2 Score: 74.3294 bits (181), Expect = 8.850e-13 Identity = 53/224 (23.66%), Postives = 109/224 (48.66%), Query Frame = 2 Query: 155 SALTLIKKCKLQTHL---HQVHSHIIKKGLEQ-------DHSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIE-VFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLM----PERSNVSWNALIGGLVKIG 781 S + L +KC T L Q+H+ ++ G +++L++ ++ C SL + VF+++ + N +N L YS+N F F + + E P+ TF +++ C+ + V G+++ + +I+ G ++V V TS++ +Y ++ AR++FD + R+ V+W MIVG + + F M + + +++ ++ G K+G Sbjct: 96 SVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISMYVR-CGSL----EQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLG 314
BLAST of CX671828 vs. ExPASy Swiss-Prot
Match: PPR45_ARATH (Pentatricopeptide repeat-containing protein At1g15510, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H73 PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 5.723e-20 Identity = 54/169 (31.95%), Postives = 88/169 (52.07%), Query Frame = 2 Query: 314 VFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAV-PDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVF----DLMPERSNVSWNALIGGLVKIGDLRSARQL 805 VF ++ N F WN L+ GY++ F E ++ R++ V PD YTFP V++ C + + G + V+R+G + D+ V +LI +Y K ++ AR +FD MP R+++SW AMI GY G E +F L + ++ ++I +GD R R + Sbjct: 151 VFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDI 319 HSP 2 Score: 77.0258 bits (188), Expect = 1.365e-13 Identity = 56/205 (27.32%), Postives = 93/205 (45.37%), Query Frame = 2 Query: 203 QVHSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMPERS----NVSWNALIGGLVKIGDLRSARQL 805 +VH H+++ G E D +V I++ + + + +F+R+ + WN ++ GY +N E +F + PD T VI AC + R G I A VI G D+ V SL +Y A K+F M +++VSWT MI GY +A + +M + S ++ A++ +GDL + +L Sbjct: 217 EVHVHVVRYGYELDIDVVNALITM-YVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVEL 420 HSP 3 Score: 73.1738 bits (178), Expect = 1.972e-12 Identity = 54/231 (23.38%), Postives = 103/231 (44.59%), Query Frame = 2 Query: 149 LLSALTLIKKCKLQTHLH---QVHSHIIKKGLEQDHSLVAHFISLCHSL------ATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMP---ERSNVSWNALIGGLVKIGDLRSARQL 805 L++ ++I C+L +H+++I G D IS+C+SL A + +F+R+ + W T++ GY N + + + ++ PD+ T V+ AC+ + + G + I+ + V V +LI++Y K K I A +F +P +NV+SWT++I G EA M + + ++ A + +IG L +++ Sbjct: 297 LMTLTSVISACELLGDRRLGRDIHAYVITTGFAVD-------ISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQMKMTLQPNAITLTAALAACARIGALMCGKEI 520
BLAST of CX671828 vs. ExPASy Swiss-Prot
Match: PPR71_ARATH (Pentatricopeptide repeat-containing protein At1g34160 OS=Arabidopsis thaliana GN=PCMP-H68 PE=2 SV=2) HSP 1 Score: 97.8265 bits (242), Expect = 7.475e-20 Identity = 63/226 (27.88%), Postives = 108/226 (47.79%), Query Frame = 2 Query: 164 TLIKKCKLQTHLHQVHSHIIKKGLEQDHSLVAHFISLCH-SLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVP------DKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMP----ERSNVSWNALIGGLVKIGDLRSARQLF 808 T+I+KC + + Q+ SH + G Q L + + C S LS++ +F I P T WN +++G++ +S F+ + ++++ + D T +KAC+ L + + R G+ D + T+L+D Y K ++ A K+FDEMP R+V SW A+I G S EA ++ M RS V+ A +G +GD++ +F Sbjct: 8 TMIQKCVSFSQIKQLQSHFLTAGHFQSSFLRSRLLERCAISPFGDLSFAVQIFRYIPKPLTNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFTLKACARALCSSAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGENIF 233 HSP 2 Score: 72.7886 bits (177), Expect = 2.575e-12 Identity = 67/246 (27.24%), Postives = 114/246 (46.34%), Query Frame = 2 Query: 92 SMLPNCSRSAPINFPKPSCLLSALTL---IKKCK---LQTHLHQVHSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMP-ERNVVSWTAMIVGYASVGDLVEAKTVFDLMPER----SNVSWNALI-----GGLVKIG 781 SML S S+ I C + ALT +K C + + Q+H I ++GL D SL+ + +S L + +F+ + + WN L+ G +R E ++ R+ E + T + ACSH+ V+EG I +++V V + ID+Y K + A +VF++ +++VV+W MI G+A G+ A +FD + + +VS+ A + GLV+ G Sbjct: 93 SMLQQSSSSSAI------CRVDALTCSFTLKACARALCSSAMDQLHCQINRRGLSAD-SLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGENI----FHGYSNDNVIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNGIKPDDVSYLAALTACRHAGLVEYG 327
BLAST of CX671828 vs. ExPASy Swiss-Prot
Match: PP271_ARATH (Putative pentatricopeptide repeat-containing protein At3g49140 OS=Arabidopsis thaliana GN=PCMP-H77 PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 7.475e-20 Identity = 73/230 (31.74%), Postives = 104/230 (45.22%), Query Frame = 2 Query: 197 LHQVHSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYA----------------SVGDLVEAKTVFDLMPERSN---------------------VSWNALIGGLVK 775 L VHS II + L + SL + SL S + VF+ I N + N +++ Y N + E +F + PD YTFP V+KACS ++ G I + + G+ +FVG L+ +YGK +S AR V DEM R+VVSW +++VGYA SV +A T+ L+P SN VSWN +IG +K Sbjct: 58 LRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVAS-ARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIGVYMK 286
BLAST of CX671828 vs. ExPASy Swiss-Prot
Match: PP128_ARATH (Pentatricopeptide repeat-containing protein At1g77170 OS=Arabidopsis thaliana GN=PCMP-E21 PE=2 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 7.475e-20 Identity = 68/197 (34.52%), Postives = 101/197 (51.27%), Query Frame = 2 Query: 245 HSLVAHFISLCHSLATPLSYSTAVF-NRIVN--PNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVF------DLMPER-SNVSWNALIGGLVKIGDLRSARQL 805 + L+A +S C SLA +F +RI++ P FLWN +++ Y ++ ++ +++ ++R +PD+Y+ P+VIKA + G + + +R G D F + I LY K E ARKVFDE PER + SW A+I G G EA +F L P+ + VS A GGL GDL A QL Sbjct: 47 NKLLATLLSNCTSLARVRRIHGDIFRSRILDQYPIAFLWNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAVQIHDFTLGKELHSVAVRLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLEPDDFTMVSVTASCGGL---GDLSLAFQL 240 HSP 2 Score: 86.6557 bits (213), Expect = 1.723e-16 Identity = 59/197 (29.95%), Postives = 97/197 (49.24%), Query Frame = 2 Query: 158 ALTLIKKCKLQTHLH----QVHSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDE--DVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMPE 730 +L ++ K +Q H ++HS ++ G D + FI+L + A + VF+ WN ++ G + R E +FV + R PD +T V +C + + + V++ +E D+ + SLID+YGK + A +F+EM +RNVVSW++MIVGYA+ G+ +EA F M E Sbjct: 119 SLPIVIKAAVQIHDFTLGKELHSVAVRLGFVGDEFCESGFITL-YCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMRE 314
BLAST of CX671828 vs. ExPASy Swiss-Prot
Match: PP111_ARATH (Putative pentatricopeptide repeat-containing protein At1g69350, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E66 PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 7.475e-20 Identity = 58/199 (29.15%), Postives = 107/199 (53.77%), Query Frame = 2 Query: 134 PKPSCLLSALTLIKKCKLQTHLHQVHSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMPE 730 P L S+++ + L Q+H H+I+ + + V + + +S + + ++ VFN+I + + WN++L G+SQN +E ++F + ++ TF VI+ACS + S+ +G + +I G+ +D+F T+LID+Y K +++ A VF M R++VSW++MI Y G + A + F+ M E Sbjct: 403 PDAFTLASSISACENAGLVPLGKQIHGHVIRTDVSDE--FVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGL-KDLFTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVE 598 HSP 2 Score: 96.2857 bits (238), Expect = 2.175e-19 Identity = 66/223 (29.60%), Postives = 114/223 (51.12%), Query Frame = 2 Query: 161 LTLIKKCKLQTHLHQVHSHIIKKG-LEQDHSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACS---HVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLM----PERSNVSWNALIGGLVKIGDLRSARQL 805 + L + C + Q+H+H++ G L +D V I + +P S S VF P++F++ L+K ++ RL+ E K+ FP V++AC+ LSV G + +I+ GVD+D + TSL+ +YG+ +S A KVFD MP R++V+W+ ++ G++V+A +F M E V+ +++ G ++G LR AR + Sbjct: 5 MPLFRSCSSLRLVSQLHAHLLVTGRLRRDPLPVTKLIESYAFMGSPDS-SRLVFEAFPYPDSFMYGVLIKCNVWCHLLDAAIDLYHRLVSETTQISKFVFPSVLRACAGSREHLSV--GGKVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSV 224 HSP 3 Score: 94.3597 bits (233), Expect = 8.264e-19 Identity = 60/224 (26.79%), Postives = 112/224 (50.00%), Query Frame = 2 Query: 149 LLSALTLIKKCKLQTHLHQ---VHSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLM----PERSNVSWNALIGGLVKIGDLRSAR 799 L++ +++ C L + + VH +++ L+ ++ ++ + ++ LS V + + N WN+L+ Y+ I+ +F +++ + PD +T I AC + V G I VIR V ++ FV SLID+Y K + A VF+++ R+VV+W +M+ G++ G+ VEA ++FD M E + V++ A+I IG L + Sbjct: 303 LVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDVSDE-FVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGK 525 HSP 4 Score: 72.0182 bits (175), Expect = 4.392e-12 Identity = 39/158 (24.68%), Postives = 80/158 (50.63%), Query Frame = 2 Query: 203 QVHSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGY 676 +VH IIK G++ D + + + + LS + VF+ + + W+TL+ +N ++ +F ++ + PD T V++ C+ + +R ++ + R D D + SL+ +Y K ++ + ++F+++ ++N VSWTAMI Y Sbjct: 122 KVHGRIIKGGVDDDAVIETSLLCM-YGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSY 278
BLAST of CX671828 vs. ExPASy Swiss-Prot
Match: PP121_ARATH (Pentatricopeptide repeat-containing protein At1g74600, chloroplastic OS=Arabidopsis thaliana GN=PCMP-E69 PE=2 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 9.762e-20 Identity = 51/137 (37.23%), Postives = 77/137 (56.20%), Query Frame = 2 Query: 314 VFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLM 724 VF ++ N + WNT++ G +N + VF +F + PD YT+ V+ AC+ + +R G +QA VI+ G EDVFV T+++DLY K ++ A +VF +P +VVSWT M+ GY D A +F M Sbjct: 207 VFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACASLEKLRFGKVVQARVIKCGA-EDVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEM 342 HSP 2 Score: 82.4185 bits (202), Expect = 3.250e-15 Identity = 46/171 (26.90%), Postives = 90/171 (52.63%), Query Frame = 2 Query: 203 QVHSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVF 715 QVH + +K GL D ++ + +L +S L S +F I + W +++ G+++ E +F ++ + PD+ T V+ CS S+ G I +R G+D+ + +G++L+++Y K + AR+V+D +PE + VS +++I GY+ G + + +F Sbjct: 471 QVHGYTLKSGLVLDLTVGSSLFTL-YSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLF 640 HSP 3 Score: 77.0258 bits (188), Expect = 1.365e-13 Identity = 47/200 (23.50%), Postives = 97/200 (48.50%), Query Frame = 2 Query: 134 PKPSCLLSALTLIKKCKLQTHLHQVHSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMPER 733 P S L + LT+ ++H + ++ G+++ L + +++ +S L + V++R+ + ++L+ GYSQ+ + F +F ++ D + ++KA + G + A + + G+ + VG+SL+ +Y K I K F ++ ++++WTA+I YA G EA V++LM E+ Sbjct: 549 PDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNM-YSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTALIASYAQHGKANEALQVYNLMKEK 747 The following BLAST results are available for this feature:
BLAST of CX671828 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 193
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Sequences
The
following sequences are available for this feature:
EST sequence >CX671828 ID=CX671828; Name=CX671828; organism=Citrus sinensis; type=EST; length=813bpback to top |