CX671828

Overview
NameCX671828
Unique NameCX671828
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length813
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5099 contig Csv1_Contig5099:1..813. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX671828 vs. ExPASy Swiss-Prot
Match: PP305_ARATH (Pentatricopeptide repeat-containing protein At4g08210 OS=Arabidopsis thaliana GN=PCMP-E100 PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.275e-19
Identity = 56/197 (28.43%), Postives = 102/197 (51.78%), Query Frame = 2
Query:  206 VHSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLI-REEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMPERSNVSWNALIGGLVKIGDLRS 793
            + +H+IK+G+ Q+  +  + IS+       LS +  VF+ +   N   W T++ GY+ + +  +   ++ R++  EE   +++ +  V+KAC  V  ++ G  +   + +  +  DV +  S++D+Y K   +  A   F E+   +  SW  +I GY   G + EA T+F  MP+ + VSWN LI G V  G  R+
Sbjct:   27 IQAHVIKQGISQNVFIANNVISMYVDFRL-LSDAHKVFDEMSERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDEAVTLFHRMPQPNVVSWNCLISGFVDKGSPRA 222          

HSP 2 Score: 83.9593 bits (206), Expect = 1.117e-15
Identity = 59/207 (28.50%), Postives = 102/207 (49.28%), Query Frame = 2
Query:  203 QVHSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLM----PERSNVSWNALIGGLVKIGDLRSARQLFD 811
            QVHS ++  G E D+ + +  + L H+    +  +  +F+R+ N +   ++ L++G  ++      F +F  LI+     D++    ++K CS + S+  G  I    I+ G + +    T+L+D+Y K  EI     +FD M ER+VVSWT +IVG+   G + EA   F  M     E + V++  L+      G L  AR   +
Sbjct:  363 QVHSLVVVSGYELDYIVGSILVDL-HANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTATALVDMYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIGIEPNKVTFLGLLSACRHSGLLEEARSTLE 568          

HSP 3 Score: 77.0258 bits (188), Expect = 1.365e-13
Identity = 46/179 (25.70%), Postives = 90/179 (50.28%), Query Frame = 2
Query:  170 IKKCK---LQTHLHQVHSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTAVFNR---IVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVG 688
            +K C    L T   Q+H  ++K GLE     ++  I + +S    L Y+  VF++    VN +  +WN++L G+  N        + +++ + +   D YT    +K C + +++R G  + + V+  G + D  VG+ L+DL+     I  A K+F  +P +++++++ +I G    G
Sbjct:  245 LKACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDM-YSNCGSLIYAADVFHQEKLAVNSSVAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSG 422          

HSP 4 Score: 72.7886 bits (177), Expect = 2.575e-12
Identity = 39/113 (34.51%), Postives = 68/113 (60.18%), Query Frame = 2
Query:  467 IKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEA----KTVFDLMPERSN-VSWNALIGGLVKIGDLR 790
            ++ C  V + + G +IQA VI+ G+ ++VF+  ++I +Y   + +S A KVFDEM ERN+V+WT M+ GY S G   +A    + + D   E +N   ++A++     +GD++
Sbjct:   12 LRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQ 124          
BLAST of CX671828 vs. ExPASy Swiss-Prot
Match: PP278_ARATH (Pentatricopeptide repeat-containing protein At3g51320 OS=Arabidopsis thaliana GN=At3g51320 PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.275e-19
Identity = 59/204 (28.92%), Postives = 98/204 (48.04%), Query Frame = 2
Query:  149 LLSALTLIKKCKLQTHLHQVHSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMPERSNVSWNALI 760
            LL    L++     THL QVH+ +I  G   D S     +          SY+ +++  I     +  N + K Y  +S   +    +  ++R   VPD YTF  +I        V  G       I+ G D+ + V  SL+ +Y     +  A+K+F E+P+R++VSW ++I G    GD++ A  +FD MP+++ +SWN +I
Sbjct:   22 LLKGFKLVEDSNSITHLFQVHARLITSGNFWDSSWAIRLLKSSSRFGDS-SYTVSIYRSI--GKLYCANPVFKAYLVSSSPKQALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCHGQAIKHGCDQVLPVQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNIISWNIMI 222          

HSP 2 Score: 78.9518 bits (193), Expect = 3.593e-14
Identity = 42/154 (27.27%), Postives = 80/154 (51.95%), Query Frame = 2
Query:  314 VFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMPERSNVSWNALIGGLVK 775
            +F+ + + N   WN ++  Y   +      ++F  ++R     ++ T  L++ AC     ++EG ++ A++IR  ++  V + T+LID+YGK KE+  AR++FD +  RN V+W  MI+ +   G            PE     + A+I G+++
Sbjct:  206 LFDEMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARLKEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAHCLHG-----------RPEGGLELFEAMINGMLR 348          
BLAST of CX671828 vs. ExPASy Swiss-Prot
Match: PP167_ARATH (Pentatricopeptide repeat-containing protein At2g21090 OS=Arabidopsis thaliana GN=PCMP-E48 PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.275e-19
Identity = 62/228 (27.19%), Postives = 112/228 (49.12%), Query Frame = 2
Query:  131 FPKPSCLLS--ALTLIKKCKLQTHLHQVHSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMPERSNVSWNALIGGLVKIGDLRSARQLF 808
            F +P+ LLS   + +  KC       +V   +  + L   +++V+ ++      +  L  +  VF+ +   +   WNT++ GY+Q+    E    +    R     ++++F  ++ AC     ++        V+  G   +V +  S+ID Y K  ++  A++ FDEM  +++  WT +I GYA +GD+  A+ +F  MPE++ VSW ALI G V+ G    A  LF
Sbjct:   77 FKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVK-----SGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLF 299          
BLAST of CX671828 vs. ExPASy Swiss-Prot
Match: PP245_ARATH (Pentatricopeptide repeat-containing protein At3g21470 OS=Arabidopsis thaliana GN=PCMP-E29 PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.665e-19
Identity = 61/155 (39.35%), Postives = 90/155 (58.06%), Query Frame = 2
Query:  353 NTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLS-VREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVF-DLMPERSNVSWNALIGGLVKIGDLRSARQLFD 811
            + L+K +      I+   ++   IR   V      PL+++AC+ V+  V  G  + +  I++GV  DV VG+SLI +YGK   +  ARKVFDEMPERNV +W AMI GY S GD V A  +F ++   R+ V+W  +I G  K  ++  AR+LF+
Sbjct:   15 SNLIKNHISRGSPIQALVLYGG-IRRRGVYFPGWVPLILRACACVVPRVVLGKLLHSESIKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAVLASGLFEEISVCRNTVTWIEMIKGYGKRIEIEKARELFE 168          

HSP 2 Score: 69.707 bits (169), Expect = 2.180e-11
Identity = 47/172 (27.33%), Postives = 82/172 (47.67%), Query Frame = 2
Query:  311 AVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVF------DLMPERSNVSWNALIGGLVKIGDLRSARQLF 808
            A+F R+   +  +WNTL+ GY+QN    +    F  +  E   PD  T   ++ AC+    +  G  + + +   G++ + FV  +LID+Y K  ++  A  VF+ +  R+V    +MI   A  G   EA  +F      DL P+   +++ A++   V  G L    ++F
Sbjct:  229 AIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAKCGDLENATSVFESISVRSVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPD--EITFIAVLTACVHGGFLMEGLKIF 398          

HSP 3 Score: 67.781 bits (164), Expect = 8.284e-11
Identity = 48/193 (24.87%), Postives = 91/193 (47.15%), Query Frame = 2
Query:  206 VHSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVD-EDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMPERSNVSWNALIGGLVKIG 781
            +HS  IK G+  D  + +  IS+       +S +  VF+ +   N   WN ++ GY  N   +    +F  +       +  T+  +IK     + + +   +     R   + ++V   + ++ +Y   +++  ARK F+++PE+N   W+ M+ GY  +GD+ EA+ +F  +  R  V WN LI G  + G
Sbjct:   68 LHSESIKFGVCSDVMVGSSLISMYGKCGCVVS-ARKVFDEMPERNVATWNAMIGGYMSNGDAVLASGLFEEI---SVCRNTVTWIEMIKGYGKRIEIEKARELFE---RMPFELKNVKAWSVMLGVYVNNRKMEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNG 253          
BLAST of CX671828 vs. ExPASy Swiss-Prot
Match: PPR60_ARATH (Pentatricopeptide repeat-containing protein At1g26900, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E54 PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.175e-19
Identity = 59/215 (27.44%), Postives = 113/215 (52.56%), Query Frame = 2
Query:  170 IKKCKLQTHLHQVHSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPER-NVVSWTAMIVGYASVGDLVEAKTVFDLMPERSNVSWN-----ALIGGLVKIGDLRSA 796
            ++ C+    + ++H +++K GL++D   V+  ++   S    + Y++++F  + N N F++NT+++GYS +      F++F +L  +    D+++F   +K+CS  L V  G  +    +R G      +  +LI  Y    +IS ARKVFDEMP+  + V+++ ++ GY  V     A  +F +M  +S V  N     + +  +  +GDL  A
Sbjct:   35 LRSCRDTVEVSRIHGYMVKTGLDKDDFAVSKLLAF--SSVLDIRYASSIFEHVSNTNLFMFNTMIRGYSISDEPERAFSVFNQLRAKGLTLDRFSFITTLKSCSRELCVSIGEGLHGIALRSGFMVFTDLRNALIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLMNGYLQVSKKALALDLFRIM-RKSEVVVNVSTLLSFLSAISDLGDLSGA 246          

HSP 2 Score: 80.4925 bits (197), Expect = 1.235e-14
Identity = 52/198 (26.26%), Postives = 97/198 (48.99%), Query Frame = 2
Query:  143 SCLLSALTLIKKCKLQTHLHQVHSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMPERS 736
            S LLS L+ I      +     H   IK GL+ D  L+   I + +     +S +  +F+  +  +   WN ++  Y++     E   +  ++  E+  P+  TF  ++ +C++  +   G  +   +    +  D  +GT+L+D+Y K   +  A ++F+ M +++V SWTAMI GY + G   EA T+F+ M E +
Sbjct:  228 STLLSFLSAISDLGDLSGAESAHVLCIKIGLDLDLHLITALIGM-YGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCAYSEAAFVGRTVADLLEEERIALDAILGTALVDMYAKVGLLEKAVEIFNRMKDKDVKSWTAMISGYGAHGLAREAVTLFNKMEEEN 424          
BLAST of CX671828 vs. ExPASy Swiss-Prot
Match: PP405_ARATH (Pentatricopeptide repeat-containing protein At5g39350 OS=Arabidopsis thaliana GN=PCMP-E16 PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.175e-19
Identity = 51/179 (28.49%), Postives = 94/179 (52.51%), Query Frame = 2
Query:  206 VHSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIRE--EAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMPERS 736
            +H H+I  G    H L    +S+ ++L   ++Y+  +F  +   +   +N +++ Y +   + +  ++F+R++ E  + VPD YT+P V KA   + S++ G  +   ++R     D +V  +L+ +Y    ++  AR VFD M  R+V+SW  MI GY   G + +A  +FD M   S
Sbjct:   37 LHCHVITGGRVSGHILST--LSVTYALCGHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNES 213          

HSP 2 Score: 74.7146 bits (182), Expect = 6.776e-13
Identity = 44/173 (25.43%), Postives = 82/173 (47.40%), Query Frame = 2
Query:  206 VHSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLM 724
            VH  I++    +D  +    +++  +    +  +  VF+ + N +   WNT++ GY +N    +   +F  ++ E    D  T   ++  C H+  +  G  +   V    + + + V  +L+++Y K   +  AR VFD M  R+V++WT MI GY   GD+  A  +  LM
Sbjct:  139 VHGRILRSWFGRDKYVQNALLAMYMNFGK-VEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLM 310          
BLAST of CX671828 vs. ExPASy Swiss-Prot
Match: PP341_ARATH (Pentatricopeptide repeat-containing protein At4g30700 OS=Arabidopsis thaliana GN=DYW9 PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.175e-19
Identity = 63/216 (29.17%), Postives = 103/216 (47.69%), Query Frame = 2
Query:  161 LTLIKKCKLQTHLHQVHSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIRE-EAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVF-DLMPER-SNVSWNALIGGLVKIGDLRSAR 799
            L   K+    +HL Q H+ II  G   D SL+         L   + Y+  +F  +  P+ FL+N L++G+S N       ++F  L +  +  P+  T+   I A S     R G  I    +  G D ++ +G++++ +Y K   +  ARKVFD MPE++ + W  MI GY      VE+  VF DL+ E  + +    L+  L  + +L+  R
Sbjct:   24 LDFFKRSTSISHLAQTHAQIILHGFRNDISLLTKLTQRLSDLGA-IYYARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELR 238          

HSP 2 Score: 83.1889 bits (204), Expect = 1.905e-15
Identity = 48/191 (25.13%), Postives = 93/191 (48.69%), Query Frame = 2
Query:  152 LSALTLIKKCKLQTHL---HQVHSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVF 715
            L + TL+    +  HL   + +H + +K      H+ V+  ++  +S    +  +  +F+     +   WN ++ GY+QN    +  ++F  + + E  P+  T   ++ AC+ + ++  G  +   V     +  ++V T+LI +Y K   I+ AR++FD M ++N V+W  MI GY   G   EA  +F
Sbjct:  320 LRSSTLVSLVPVSGHLMLIYAIHGYCLKSNF-LSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIF 509          

HSP 3 Score: 70.4774 bits (171), Expect = 1.278e-11
Identity = 41/135 (30.37%), Postives = 69/135 (51.11%), Query Frame = 2
Query:  314 VFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVP-DKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVF 715
            VF+R+   +T LWNT++ GY +N  ++E   +F  LI E     D  T   ++ A + +  +R G  I +   + G     +V T  I LY K  +I     +F E  + ++V++ AMI GY S G+   + ++F
Sbjct:  176 VFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLF 310          
BLAST of CX671828 vs. ExPASy Swiss-Prot
Match: PP280_ARATH (Pentatricopeptide repeat-containing protein At3g53360, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E86 PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.175e-19
Identity = 60/213 (28.17%), Postives = 111/213 (52.11%), Query Frame = 2
Query:  203 QVHSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTAV---FNRIV----NPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMP----ERSNVSWNALIGGLVKIGDLRSARQLF 808
            Q+HS+IIK G   D       +++C+SL T  ++ + +   FN       N ++  WNT+L    Q+ + +E+  +F  ++  E  PD  T   +++ C  + S++ G+ +    ++ G+  + F+   LID+Y K   +  AR++FD M  R+VVSW+ +IVGYA  G   EA  +F  M     E ++V++  ++     +G +    +L+
Sbjct:  392 QIHSYIIKWGFLAD-------LTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLY 597          

HSP 2 Score: 91.2781 bits (225), Expect = 6.996e-18
Identity = 52/188 (27.66%), Postives = 101/188 (53.72%), Query Frame = 2
Query:  149 LLSALTLIKKCKLQTHLHQ---VHSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEA 703
            L + ++LI  C     L Q   +H HI+    + D  L  H +S+ +     L  +  VF+ +   N   + +++ GYSQN +  E   +++++++E+ VPD++ F  +IKAC+    V  G  + A VI+      +    +LI +Y +  ++S A +VF  +P ++++SW+++I G++ +G   EA
Sbjct:   67 LRTYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSM-YGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEA 253          

HSP 3 Score: 71.633 bits (174), Expect = 5.737e-12
Identity = 52/192 (27.08%), Postives = 94/192 (48.96%), Query Frame = 2
Query:  164 TLIKKCKLQTHL---HQVHSHIIKKGLEQDHSLVA-HFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAV-PDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLM 724
            ++IK C   + +    Q+H+ +IK  LE    L+A + +   +     +S ++ VF  I   +   W++++ G+SQ     E  +    ++      P++Y F   +KACS +L    G+ I    I+  +  +   G SL D+Y +   ++ AR+VFD++   +  SW  +I G A+ G   EA +VF  M
Sbjct:  173 SIIKACASSSDVGLGKQLHAQVIK--LESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQM 362          

HSP 4 Score: 68.1662 bits (165), Expect = 6.342e-11
Identity = 46/186 (24.73%), Postives = 89/186 (47.85%), Query Frame = 2
Query:  269 SLCHSLATP--LSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPER-NVVSWTAMIVGYASVGDLVEAKTVFDLM----PERSNVSWNALIGGLVKIGDLRSARQL 805
            SLC   A    L+ +  VF++I  P+T  WN ++ G + N    E  ++F ++     +PD  +   ++ A +  +++ +G  I + +I+WG   D+ V  SL+ +Y    ++ C   +F++     + VSW  ++         VE   +F LM     E  +++   L+ G V+I  L+   Q+
Sbjct:  310 SLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQV 495          
BLAST of CX671828 vs. ExPASy Swiss-Prot
Match: PP115_ARATH (Pentatricopeptide repeat-containing protein At1g71460, chloroplastic OS=Arabidopsis thaliana GN=PCMP-A3 PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.175e-19
Identity = 70/221 (31.67%), Postives = 107/221 (48.42%), Query Frame = 2
Query:  113 RSAPINFPKPSCLLSALTLIKKCKLQTHLHQVHSHIIKKGLEQDHSL---VAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKG--YSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMPERSNVSWNALI 760
            R  P+N    S LL A     + K   H  QVH HI   GLE +  L   + H  + C S+      +  VF+   + N + WN LL+G   S   R+ +V + F  +       + Y+   V K+ +   ++R+G    A  I+ G+   VF+ TSL+D+Y K  ++  AR+VFDE+ ER++V W AMI G A      EA  +F  M     +  N++I
Sbjct:  105 RGIPVNATTFSALLEACV---RRKSLLHGKQVHVHIRINGLESNEFLRTKLVHMYTACGSVKD----AQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRELGVDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVI 318          

HSP 2 Score: 74.3294 bits (181), Expect = 8.850e-13
Identity = 56/202 (27.72%), Postives = 91/202 (45.05%), Query Frame = 2
Query:  131 FPKPSCLLSALTLIKKCKLQTHLHQVHSHIIKKG--LEQD--HSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLM 724
            +P    L + L ++   K      +VH+H++K    +EQ   HS +      C  +A+       VF      N   W  L+ GY+ N RF +     V + +E   PD  T   V+  C+ + ++++G  I    ++     +V + TSL+ +Y K        ++FD + +RNV +WTAMI  Y    DL     VF LM
Sbjct:  313 YPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMAS----GRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLM 510          

HSP 3 Score: 72.4034 bits (176), Expect = 3.363e-12
Identity = 47/169 (27.81%), Postives = 82/169 (48.52%), Query Frame = 2
Query:  203 QVHSHIIKKGLEQDHSLVAHFISLCHSLATPLSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAV-PDKYTFPLVIKACSHVLSVREGTAIQAAVIRW-GVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEA 703
            + H+  IK GL     L    + +       +  +  VF+ IV  +  +W  ++ G + N R  E   +F  +I EE + P+      ++     V +++ G  + A V++     E  FV + LIDLY K  +++  R+VF    +RN +SWTA++ GYA+ G   +A
Sbjct:  235 KTHALAIKNGLFNSVFLKTSLVDMYFKCGK-VGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQA 402          
BLAST of CX671828 vs. ExPASy Swiss-Prot
Match: PP185_ARATH (Pentatricopeptide repeat-containing protein At2g35030, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E15 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.840e-19
Identity = 55/172 (31.98%), Postives = 89/172 (51.74%), Query Frame = 2
Query:  296 LSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAVPDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMPERSNVSWNALIGGLVKIGDLRSARQLFD 811
            LS +  +F  +   N   WNT++ GY+Q+ R  +   +F  +     V    ++  ++KA      + E   +   + R     DV   T+++D   K  ++  AR++FD MPERN++SW AMI GYA    + EA  +F +MPER   SWN +I G ++  ++  A  LFD
Sbjct:  125 LSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPERNIV----SWNSMVKALVQRGRIDEAMNLFERMPR----RDVVSWTAMVDGLAKNGKVDEARRLFDCMPERNIISWNAMITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFIRNREMNKACGLFD 288          

HSP 2 Score: 82.4185 bits (202), Expect = 3.250e-15
Identity = 40/89 (44.94%), Postives = 59/89 (66.29%), Query Frame = 2
Query:  545 EDVFVGTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVGDLVEAKTVFDLMPERSNVSWNALIGGLVKIGDLRSARQLFD 811
            ++V   T+++  Y + K++S A  +F EMPERNVVSW  MI GYA  G + +A  +FD MPER+ VSWN+++  LV+ G +  A  LF+
Sbjct:  107 KNVVTWTAMVSGYLRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPERNIVSWNSMVKALVQRGRIDEAMNLFE 195          

HSP 3 Score: 76.6406 bits (187), Expect = 1.783e-13
Identity = 41/146 (28.08%), Postives = 82/146 (56.16%), Query Frame = 2
Query:  296 LSYSTAVFNRIVNPNTFLWNTLLKGYSQNSRFIEVFTIFVRLIREEAV-PDKYTFPLVIKACSHVLSVREGTAIQAAVIRWGVDEDVFVGTSLIDLYGKRKEISCARKVFDE--MPERNVVSWTAMIVGYASVGDLVEAKTVFDLM 724
            ++ +  +F+R+   N   W T++ GY +N    E   +F +++R+ +V P+  T+  ++ ACS +  + EG  I   + +    ++  V ++L+++Y K  E+  ARK+FD   + +R+++SW +MI  YA  G   EA  +++ M
Sbjct:  280 MNKACGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQM 425          
The following BLAST results are available for this feature:
BLAST of CX671828 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 193
Match NameE-valueIdentityDescription
PP305_ARATH1.275e-1928.43Pentatricopeptide repeat-containing protein At4g08... [more]
PP278_ARATH1.275e-1928.92Pentatricopeptide repeat-containing protein At3g51... [more]
PP167_ARATH1.275e-1927.19Pentatricopeptide repeat-containing protein At2g21... [more]
PP245_ARATH1.665e-1939.35Pentatricopeptide repeat-containing protein At3g21... [more]
PPR60_ARATH2.175e-1927.44Pentatricopeptide repeat-containing protein At1g26... [more]
PP405_ARATH2.175e-1928.49Pentatricopeptide repeat-containing protein At5g39... [more]
PP341_ARATH2.175e-1929.17Pentatricopeptide repeat-containing protein At4g30... [more]
PP280_ARATH2.175e-1928.17Pentatricopeptide repeat-containing protein At3g53... [more]
PP115_ARATH2.175e-1931.67Pentatricopeptide repeat-containing protein At1g71... [more]
PP185_ARATH2.840e-1931.98Pentatricopeptide repeat-containing protein At2g35... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_13D05_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-13D05-G9-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671828 ID=CX671828; Name=CX671828; organism=Citrus sinensis; type=EST; length=813bp
GGACAGTGGGCAACTATCCCGCGAGGGAGAGCTAACTCCAATGCCCAAAA
TTGACGAACCAAACACGCCATGCAAGCACAAGTCCTGCTCTTCGATGCTA
CCTAACTGCTCACGATCAGCGCCCATCAACTTCCCAAAACCATCGTGTCT
CCTTTCCGCTTTAACCCTGATAAAGAAGTGCAAACTCCAAACTCACCTCC
ACCAGGTTCACTCTCACATCATCAAAAAGGGCCTCGAGCAAGATCACTCT
CTCGTTGCCCACTTCATCTCGCTGTGTCACTCCCTCGCCACTCCCTTATC
TTACTCTACCGCCGTCTTCAACCGCATTGTCAATCCCAATACTTTTCTTT
GGAACACCCTCTTAAAAGGGTACTCTCAGAATTCTCGTTTTATTGAGGTT
TTTACGATTTTTGTTCGATTGATTAGAGAGGAAGCGGTGCCTGATAAGTA
TACGTTCCCATTGGTAATTAAGGCGTGTTCGCATGTGCTTAGTGTGAGGG
AAGGAACGGCGATTCAAGCTGCTGTAATTAGGTGGGGGGTTGATGAGGAT
GTGTTTGTGGGAACTAGTTTGATTGACTTATATGGGAAACGTAAAGAGAT
TTCTTGCGCCCGTAAAGTGTTCGATGAAATGCCTGAGAGAAATGTTGTTT
CATGGACAGCGATGATTGTTGGATATGCGAGTGTTGGGGATTTGGTGGAA
GCGAAGACGGTTTTTGATTTAATGCCGGAGAGGAGTAATGTTTCATGGAA
TGCTTTGATTGGGGGGTTAGTGAAGATAGGAGATTTGAGAAGTGCTAGGC
AGTTGTTTGATGA
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