CX671819
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX671819 vs. ExPASy Swiss-Prot
Match: STM_ARATH (Homeobox protein SHOOT MERISTEMLESS OS=Arabidopsis thaliana GN=STM PE=1 SV=2) HSP 1 Score: 98.5969 bits (244), Expect = 4.637e-20 Identity = 41/83 (49.40%), Postives = 56/83 (67.47%), Query Frame = -1 Query: 552 QELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNW 800 +ELK +L + Y + +++E ++KR+ GKLP + L WW H KWPYP+E+ K L + TGL KQINNWFINQRKR+W Sbjct: 261 RELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSEQQKLALAESTGLDQKQINNWFINQRKRHW 343
BLAST of CX671819 vs. ExPASy Swiss-Prot
Match: RSH1_MAIZE (Homeobox protein rough sheath 1 OS=Zea mays GN=RS1 PE=2 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 4.637e-20 Identity = 41/83 (49.40%), Postives = 57/83 (68.67%), Query Frame = -1 Query: 552 QELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNW 800 +ELK++L + Y + +R+E +K++ GKLP + L WW+ H KWPYP+E +K L + TGL KQINNWFINQRKR+W Sbjct: 231 KELKYQLLKKYSGYLSSLRQEFSKKKKKGKLPKEARQKLLHWWELHYKWPYPSETEKIALAESTGLDQKQINNWFINQRKRHW 313
BLAST of CX671819 vs. ExPASy Swiss-Prot
Match: KNAT1_ARATH (Homeobox protein knotted-1-like 1 OS=Arabidopsis thaliana GN=KNAT1 PE=1 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 4.637e-20 Identity = 40/83 (48.19%), Postives = 58/83 (69.88%), Query Frame = -1 Query: 552 QELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNW 800 +ELK+ L + Y + +++E+ +K++ GKLP + L +WW+ H KWPYP+E +K L + TGL KQINNWFINQRKR+W Sbjct: 278 RELKNHLLKKYSGYLSSLKQELSKKKKKGKLPKEARQKLLTWWELHYKWPYPSESEKVALAESTGLDQKQINNWFINQRKRHW 360
BLAST of CX671819 vs. ExPASy Swiss-Prot
Match: KNOS4_ORYSJ (Homeobox protein knotted-1-like 4 OS=Oryza sativa subsp. japonica GN=OSH10 PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 6.056e-20 Identity = 43/87 (49.43%), Postives = 55/87 (63.22%), Query Frame = -1 Query: 540 QELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNWHSNP 800 +ELK L Y + + E+ +K++ GKLP D L WWQ H +WPYP+E +KA L + TGL KQINNWFINQRKR+W P Sbjct: 199 KELKSHLLNKYSGYLSSLWRELSKKKKKGKLPRDARQKLLHWWQLHYRWPYPSELEKAALAESTGLDAKQINNWFINQRKRHWKPTP 285
BLAST of CX671819 vs. ExPASy Swiss-Prot
Match: KNOX4_MAIZE (Homeobox protein knotted-1-like 4 (Fragment) OS=Zea mays GN=KNOX4 PE=2 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 7.909e-20 Identity = 41/82 (50.00%), Postives = 56/82 (68.29%), Query Frame = -1 Query: 552 ELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNW 797 ELK++L + Y + +R+E +K++ GKLP + L WW+ H KWPYP+E +K L + TGL KQINNWFINQRKR+W Sbjct: 1 ELKYQLLKKYSGYLSSLRQEFSKKKKKGKLPKEARQKLLHWWELHYKWPYPSETEKIALAEATGLDQKQINNWFINQRKRHW 82
BLAST of CX671819 vs. ExPASy Swiss-Prot
Match: KNX10_MAIZE (Homeobox protein knotted-1-like 10 (Fragment) OS=Zea mays GN=KNOX10 PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 1.033e-19 Identity = 42/82 (51.22%), Postives = 55/82 (67.07%), Query Frame = -1 Query: 552 ELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNW 797 +LK+ L Y + + E+ RK++ GKLP D L WWQ H +WPYP+E +KA L + TGL+ KQINNWFINQRKR+W Sbjct: 4 DLKNRLLNKYSGYLSSLWRELSRKKKKGKLPRDARQKLLHWWQLHYRWPYPSELEKAALAESTGLEAKQINNWFINQRKRHW 85
BLAST of CX671819 vs. ExPASy Swiss-Prot
Match: KNOX3_MAIZE (Homeobox protein knotted-1-like 3 (Fragment) OS=Zea mays GN=KNOX3 PE=2 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 1.033e-19 Identity = 41/83 (49.40%), Postives = 59/83 (71.08%), Query Frame = -1 Query: 552 QELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNW 800 +ELK +L + Y + ++R+E+ +KR+ KLP + L SWW+ H +WPYP+E +K L + TGL+ KQINNWFINQRKR+W Sbjct: 3 KELKKQLLRKYSGCLGNLRKELCKKRKKDKLPKEARQKLLSWWELHYRWPYPSEMEKIALAESTGLEQKQINNWFINQRKRHW 85
BLAST of CX671819 vs. ExPASy Swiss-Prot
Match: KNOSC_ORYSJ (Homeobox protein knotted-1-like 12 OS=Oryza sativa subsp. japonica GN=OSH15 PE=2 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 1.033e-19 Identity = 41/83 (49.40%), Postives = 56/83 (67.47%), Query Frame = -1 Query: 552 QELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNW 800 +ELK +L + Y + +R+E +K++ GKLP + L WW+ H KWPYP+E +K L + TGL KQINNWFINQRKR+W Sbjct: 235 KELKFQLLKKYSGYLSSLRQEFSKKKKKGKLPKEARQKLLHWWELHYKWPYPSETEKIALAESTGLDQKQINNWFINQRKRHW 317
BLAST of CX671819 vs. ExPASy Swiss-Prot
Match: KNOSC_ORYSI (Homeobox protein knotted-1-like 12 OS=Oryza sativa subsp. indica GN=OSH15 PE=2 SV=2) HSP 1 Score: 97.4413 bits (241), Expect = 1.033e-19 Identity = 41/83 (49.40%), Postives = 56/83 (67.47%), Query Frame = -1 Query: 552 QELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNW 800 +ELK +L + Y + +R+E +K++ GKLP + L WW+ H KWPYP+E +K L + TGL KQINNWFINQRKR+W Sbjct: 235 KELKFQLLKKYSGYLSSLRQEFSKKKKKGKLPKEARQKLLHWWELHYKWPYPSETEKIALAESTGLDQKQINNWFINQRKRHW 317
BLAST of CX671819 vs. ExPASy Swiss-Prot
Match: LET6_SOLLC (Homeobox protein knotted-1-like LET6 OS=Solanum lycopersicum GN=LET6 PE=2 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.349e-19 Identity = 41/83 (49.40%), Postives = 55/83 (66.27%), Query Frame = -1 Query: 552 QELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNW 800 +ELK +L + Y + +++E ++KR+ GKLP + L WW H KWPYP+E K L + TGL KQINNWFINQRKR+W Sbjct: 236 RELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLVDWWLRHIKWPYPSESQKLALAESTGLDQKQINNWFINQRKRHW 318 The following BLAST results are available for this feature:
BLAST of CX671819 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 50
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Sequences
The
following sequences are available for this feature:
EST sequence >CX671819 ID=CX671819; Name=CX671819; organism=Citrus sinensis; type=EST; length=839bpback to top |