CX671802

Overview
NameCX671802
Unique NameCX671802
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length640
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6745 contig Csv1_Contig6745:1799..2441. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX671802 vs. ExPASy Swiss-Prot
Match: ALDOA_MOUSE (Fructose-bisphosphate aldolase A OS=Mus musculus GN=Aldoa PE=1 SV=2)

HSP 1 Score: 77.0258 bits (188), Expect = 9.010e-14
Identity = 37/82 (45.12%), Postives = 50/82 (60.98%), Query Frame = -2
Query:  310 NLNAMNQLKRKKPWSLSFSFGRALQQSTFKAWAGKEENVQKAPAAFLVRCKANFGATLGTYKGDAQLGEGAAESFHVKGYKY 555
            NLNA+N+    KPW+L+FS+GRALQ S  KAW GK+EN++ A   ++ R  AN  A  G Y    Q G  A+ES  +  + Y
Sbjct:  283 NLNAINKCPLLKPWALTFSYGRALQASALKAWGGKKENLKAAQEEYIKRALANSLACQGKYTPSGQSGAAASESLFISNHAY 364          
BLAST of CX671802 vs. ExPASy Swiss-Prot
Match: ALFC_ORYSJ (Fructose-bisphosphate aldolase, chloroplastic OS=Oryza sativa subsp. japonica GN=Os11g0171300 PE=1 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 1.537e-13
Identity = 42/84 (50.00%), Postives = 50/84 (59.52%), Query Frame = -2
Query:  310 TRNLNAMNQLKRKKPWSLSFSFGRALQQSTFKAWAGKEENVQKAPAAFLVRCKANFGATLGTYKGDAQLGEGAAESFHVKGYKY 561
            T+NLNAMNQ     PW +SFS+ RALQ +  K W G+ ENV+ A  A L+R KAN  A LG Y  D +  E A E   VK Y Y
Sbjct:  308 TQNLNAMNQ--GPNPWHVSFSYARALQNTCLKTWGGQPENVKAAQDALLLRAKANSLAQLGKYTSDGEAAE-AKEGMFVKNYVY 388          
BLAST of CX671802 vs. ExPASy Swiss-Prot
Match: ALF_PLAFA (Fructose-bisphosphate aldolase OS=Plasmodium falciparum PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 3.424e-13
Identity = 47/110 (42.73%), Postives = 58/110 (52.73%), Query Frame = -2
Query:  310 RALQPTMPXXXXXXXXXXXXXXXXXATRNLNAMNQLKRKKPWSLSFSFGRALQQSTFKAWAGKEENVQKAPAAFLVRCKANFGATLGTYKGDAQLGEGAAESFHVKGYKY 639
            R L+ T+P                 A+ NLN++N L    PW+L+FS+GRALQ S    W GK+ENV KA    L R +AN  AT G YKG A  GE A  S + K Y Y
Sbjct:  262 RTLRRTVPPALPGVVFLSGGQSEEEASVNLNSINALG-PHPWALTFSYGRALQASVLNTWQGKKENVAKAREVLLQRAEANSLATYGKYKGGAG-GENAGASLYEKKYVY 369          
BLAST of CX671802 vs. ExPASy Swiss-Prot
Match: ALF_PLAF7 (Fructose-bisphosphate aldolase OS=Plasmodium falciparum (isolate 3D7) GN=PF14_0425 PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 3.424e-13
Identity = 47/110 (42.73%), Postives = 58/110 (52.73%), Query Frame = -2
Query:  310 RALQPTMPXXXXXXXXXXXXXXXXXATRNLNAMNQLKRKKPWSLSFSFGRALQQSTFKAWAGKEENVQKAPAAFLVRCKANFGATLGTYKGDAQLGEGAAESFHVKGYKY 639
            R L+ T+P                 A+ NLN++N L    PW+L+FS+GRALQ S    W GK+ENV KA    L R +AN  AT G YKG A  GE A  S + K Y Y
Sbjct:  262 RTLRRTVPPALPGVVFLSGGQSEEEASVNLNSINALG-PHPWALTFSYGRALQASVLNTWQGKKENVAKAREVLLQRAEANSLATYGKYKGGAG-GENAGASLYEKKYVY 369          
BLAST of CX671802 vs. ExPASy Swiss-Prot
Match: ALFC3_ARATH (Probable fructose-bisphosphate aldolase 3, chloroplastic OS=Arabidopsis thaliana GN=FBA3 PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 3.424e-13
Identity = 40/84 (47.62%), Postives = 49/84 (58.33%), Query Frame = -2
Query:  310 TRNLNAMNQLKRKKPWSLSFSFGRALQQSTFKAWAGKEENVQKAPAAFLVRCKANFGATLGTYKGDAQLGEGAAESFHVKGYKY 561
            T NLNAMNQ     PW +SFS+ RALQ S  + W GK E ++ +  A LVR KAN  A LG Y  + +  E A +   VKGY Y
Sbjct:  311 TLNLNAMNQ--SPNPWHVSFSYARALQNSVLRTWQGKPEKIEASQKALLVRAKANSLAQLGKYSAEGE-NEDAKKGMFVKGYTY 391          
BLAST of CX671802 vs. ExPASy Swiss-Prot
Match: ALF_SCHMA (Fructose-bisphosphate aldolase OS=Schistosoma mansoni PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 7.627e-13
Identity = 39/92 (42.39%), Postives = 51/92 (55.43%), Query Frame = -2
Query:  364 RALQPTMPXXXXXXXXXXXXXXXXXATRNLNAMNQLKRKKPWSLSFSFGRALQQSTFKAWAGKEENVQKAPAAFLVRCKANFGATLGTYKGD 639
            RALQ T+P                 AT+NLN +N++   KPW+L+FSFGRALQ S    W GK+ENV  A    L   KAN  A +G ++G+
Sbjct:  255 RALQRTVPPAVPGITFLSGGQSELDATKNLNEINKIPGPKPWALTFSFGRALQASVLATWKGKKENVHAAQEELLKLAKANGAAAVGKFEGN 346          
BLAST of CX671802 vs. ExPASy Swiss-Prot
Match: ALDOC_PANTR (Fructose-bisphosphate aldolase C OS=Pan troglodytes GN=ALDOC PE=2 SV=3)

HSP 1 Score: 73.9442 bits (180), Expect = 7.627e-13
Identity = 33/82 (40.24%), Postives = 50/82 (60.98%), Query Frame = -2
Query:  310 NLNAMNQLKRKKPWSLSFSFGRALQQSTFKAWAGKEENVQKAPAAFLVRCKANFGATLGTYKGDAQLGEGAAESFHVKGYKY 555
            NLNA+N+    +PW+L+FS+GRALQ S   AW G+ +N + A   F+ R + N  A  G Y+G  + G  AA+S ++  + Y
Sbjct:  283 NLNAINRCPLPRPWALTFSYGRALQASALNAWRGQRDNAEAATEEFIKRAEVNGLAAQGKYEGSGEDGGAAAQSLYIANHAY 364          
BLAST of CX671802 vs. ExPASy Swiss-Prot
Match: ALF2_LAMJA (Fructose-bisphosphate aldolase, non-muscle type OS=Lampetra japonica PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.301e-12
Identity = 42/109 (38.53%), Postives = 54/109 (49.54%), Query Frame = -2
Query:  310 ALQPTMPXXXXXXXXXXXXXXXXXATRNLNAMNQLKRKKPWSLSFSFGRALQQSTFKAWAGKEENVQKAPAAFLVRCKANFGATLGTYKGDAQLGEGAAESFHVKGYKY 636
            AL+ T+P                 A+ NLNA+NQL  ++PW+LSFS+GRALQ S  KAWAG   N+  A   F  R   N  A  G Y      G  A+ES  +  + Y
Sbjct:  256 ALRRTVPSAVPGITFLSGGQSEEDASLNLNAINQLPLERPWALSFSYGRALQASVLKAWAGAPANIPAAKKEFEKRAAINGLAAQGKYVPAGSSGSAASESLFIANHNY 364          
BLAST of CX671802 vs. ExPASy Swiss-Prot
Match: ALDOC_MACFA (Fructose-bisphosphate aldolase C OS=Macaca fascicularis GN=ALDOC PE=2 SV=3)

HSP 1 Score: 72.7886 bits (177), Expect = 1.699e-12
Identity = 38/109 (34.86%), Postives = 57/109 (52.29%), Query Frame = -2
Query:  310 ALQPTMPXXXXXXXXXXXXXXXXXATRNLNAMNQLKRKKPWSLSFSFGRALQQSTFKAWAGKEENVQKAPAAFLVRCKANFGATLGTYKGDAQLGEGAAESFHVKGYKY 636
            AL+ T+P                 A+ NLNA+N+    +PW+L+FS+GRALQ S   AW G+ +N   A   F+ R + N  A  G Y+G  + G  AA+S ++  + Y
Sbjct:  256 ALRRTVPPAVPGVTFLSGGQSEEEASLNLNAINRCPLPRPWALTFSYGRALQASALNAWRGQRDNAGAATEEFIKRAEVNGLAAQGKYEGSGEDGGAAAQSLYIANHAY 364          
BLAST of CX671802 vs. ExPASy Swiss-Prot
Match: ALDOC_HUMAN (Fructose-bisphosphate aldolase C OS=Homo sapiens GN=ALDOC PE=1 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 2.219e-12
Identity = 33/82 (40.24%), Postives = 49/82 (59.76%), Query Frame = -2
Query:  310 NLNAMNQLKRKKPWSLSFSFGRALQQSTFKAWAGKEENVQKAPAAFLVRCKANFGATLGTYKGDAQLGEGAAESFHVKGYKY 555
            NLNA+N+    +PW+L+FS+GRALQ S   AW G+ +N   A   F+ R + N  A  G Y+G  + G  AA+S ++  + Y
Sbjct:  283 NLNAINRCPLPRPWALTFSYGRALQASALNAWRGQRDNAGAATEEFIKRAEVNGLAAQGKYEGSGEDGGAAAQSLYIANHAY 364          
The following BLAST results are available for this feature:
BLAST of CX671802 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 46
Match NameE-valueIdentityDescription
ALDOA_MOUSE9.010e-1445.12Fructose-bisphosphate aldolase A OS=Mus musculus G... [more]
ALFC_ORYSJ1.537e-1350.00Fructose-bisphosphate aldolase, chloroplastic OS=O... [more]
ALF_PLAFA3.424e-1342.73Fructose-bisphosphate aldolase OS=Plasmodium falci... [more]
ALF_PLAF73.424e-1342.73Fructose-bisphosphate aldolase OS=Plasmodium falci... [more]
ALFC3_ARATH3.424e-1347.62Probable fructose-bisphosphate aldolase 3, chlorop... [more]
ALF_SCHMA7.627e-1342.39Fructose-bisphosphate aldolase OS=Schistosoma mans... [more]
ALDOC_PANTR7.627e-1340.24Fructose-bisphosphate aldolase C OS=Pan troglodyte... [more]
ALF2_LAMJA1.301e-1238.53Fructose-bisphosphate aldolase, non-muscle type OS... [more]
ALDOC_MACFA1.699e-1234.86Fructose-bisphosphate aldolase C OS=Macaca fascicu... [more]
ALDOC_HUMAN2.219e-1240.24Fructose-bisphosphate aldolase C OS=Homo sapiens G... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS10_13C03_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-13C03-E5-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671802 ID=CX671802; Name=CX671802; organism=Citrus sinensis; type=EST; length=640bp
TTTTTTTTTTTTTTTTTAAAACCGAAAGCAATAAGCACAAAAAAACATTA
TCAATTATGTGACAAAATCCCAAAAATTTAGCGCCCTTAGGGGAAAAGGA
AAAAAAAAAACAAAAACAAAAGCATAAACCGTTTTCAGTTTAGTTTTGAT
CAAAACCCCCCAAACCGAAGTTCCCAAGCTTTTTATTGCCCCCCCTAAAA
TGAAAAAGCCCTAAAACTATGAAGGAAAATGGGCCAACCTAATGTTCATA
CCCCCCTTTACCCCCAAAAAGTTCAAAAAGCACAACCCCCAAAGCTTCAA
CTGGGCTTAATATTTGTAGCCCTTGACATGGAAAGACTCTGCGGCACCTT
CCCCAAGCTGGGCATCCCCCTTGTAAGTACCGAGGGTAGCCCCAAAGTTG
GCCTTGCACCTGACAAGGAAAGCAGCCGGGGCCTTCTGCACATTCTCTTC
CTTTCCAGCCCATGCCTTGAAAGTGCTCTGCTGAAGTGCACGTCCAAAGG
AAAAGGAAAGGGACCATGGCTTCTTCCTCTTGAGCTGGTTCATGGCATTA
AGGTTGCGGGTAGCCCCCCCCCCACTCTGCCCACCAAAAAAAAACACAAC
AACAGGAACTGCTGCAGGCATAGTGGGTTGCAGGGCCCGG
back to top