EY664520

Overview
NameEY664520
Unique NameEY664520
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length916
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY664520 vs. ExPASy Swiss-Prot
Match: THIO_STAAN (Thioredoxin OS=Staphylococcus aureus (strain N315) GN=trxA PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.958e-14
Identity = 40/103 (38.83%), Postives = 64/103 (62.14%), Query Frame = 1
Query:  298 ITEITESEFPNTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDHDANPQLIEEYKVYGLPTLILFKNGQEVPESRREGAITKLKLKEYID 606
            I ++T+++F + V    +  LV+F A WCGPC+++AP +E LA +Y  +  ++K+D D NP    +Y+V  +PTLI+FK+GQ  P  +  G   K  L E +D
Sbjct:    3 IVKVTDADFDSKVESGVQ--LVDFWATWCGPCKMIAPVLEELAADYEGKADILKLDVDENPSTAAKYEVMSIPTLIVFKDGQ--PVDKVVGFQPKENLAEVLD 101          
BLAST of EY664520 vs. ExPASy Swiss-Prot
Match: THIO_STAAM (Thioredoxin OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=trxA PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.958e-14
Identity = 40/103 (38.83%), Postives = 64/103 (62.14%), Query Frame = 1
Query:  298 ITEITESEFPNTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDHDANPQLIEEYKVYGLPTLILFKNGQEVPESRREGAITKLKLKEYID 606
            I ++T+++F + V    +  LV+F A WCGPC+++AP +E LA +Y  +  ++K+D D NP    +Y+V  +PTLI+FK+GQ  P  +  G   K  L E +D
Sbjct:    3 IVKVTDADFDSKVESGVQ--LVDFWATWCGPCKMIAPVLEELAADYEGKADILKLDVDENPSTAAKYEVMSIPTLIVFKDGQ--PVDKVVGFQPKENLAEVLD 101          
BLAST of EY664520 vs. ExPASy Swiss-Prot
Match: THIO_STAAC (Thioredoxin OS=Staphylococcus aureus (strain COL) GN=trxA PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.958e-14
Identity = 40/103 (38.83%), Postives = 64/103 (62.14%), Query Frame = 1
Query:  298 ITEITESEFPNTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDHDANPQLIEEYKVYGLPTLILFKNGQEVPESRREGAITKLKLKEYID 606
            I ++T+++F + V    +  LV+F A WCGPC+++AP +E LA +Y  +  ++K+D D NP    +Y+V  +PTLI+FK+GQ  P  +  G   K  L E +D
Sbjct:    3 IVKVTDADFDSKVESGVQ--LVDFWATWCGPCKMIAPVLEELAADYEGKADILKLDVDENPSTAAKYEVMSIPTLIVFKDGQ--PVDKVVGFQPKENLAEVLD 101          
BLAST of EY664520 vs. ExPASy Swiss-Prot
Match: THIO_STAAB (Thioredoxin OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=trxA PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.958e-14
Identity = 40/103 (38.83%), Postives = 64/103 (62.14%), Query Frame = 1
Query:  298 ITEITESEFPNTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDHDANPQLIEEYKVYGLPTLILFKNGQEVPESRREGAITKLKLKEYID 606
            I ++T+++F + V    +  LV+F A WCGPC+++AP +E LA +Y  +  ++K+D D NP    +Y+V  +PTLI+FK+GQ  P  +  G   K  L E +D
Sbjct:    3 IVKVTDADFDSKVESGVQ--LVDFWATWCGPCKMIAPVLEELAADYEGKADILKLDVDENPSTAAKYEVMSIPTLIVFKDGQ--PVDKVVGFQPKENLAEVLD 101          
BLAST of EY664520 vs. ExPASy Swiss-Prot
Match: THIO_STAA8 (Thioredoxin OS=Staphylococcus aureus (strain NCTC 8325) GN=trxA PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.958e-14
Identity = 40/103 (38.83%), Postives = 64/103 (62.14%), Query Frame = 1
Query:  298 ITEITESEFPNTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDHDANPQLIEEYKVYGLPTLILFKNGQEVPESRREGAITKLKLKEYID 606
            I ++T+++F + V    +  LV+F A WCGPC+++AP +E LA +Y  +  ++K+D D NP    +Y+V  +PTLI+FK+GQ  P  +  G   K  L E +D
Sbjct:    3 IVKVTDADFDSKVESGVQ--LVDFWATWCGPCKMIAPVLEELAADYEGKADILKLDVDENPSTAAKYEVMSIPTLIVFKDGQ--PVDKVVGFQPKENLAEVLD 101          
BLAST of EY664520 vs. ExPASy Swiss-Prot
Match: THIO_STAA3 (Thioredoxin OS=Staphylococcus aureus (strain USA300) GN=trxA PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.958e-14
Identity = 40/103 (38.83%), Postives = 64/103 (62.14%), Query Frame = 1
Query:  298 ITEITESEFPNTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDHDANPQLIEEYKVYGLPTLILFKNGQEVPESRREGAITKLKLKEYID 606
            I ++T+++F + V    +  LV+F A WCGPC+++AP +E LA +Y  +  ++K+D D NP    +Y+V  +PTLI+FK+GQ  P  +  G   K  L E +D
Sbjct:    3 IVKVTDADFDSKVESGVQ--LVDFWATWCGPCKMIAPVLEELAADYEGKADILKLDVDENPSTAAKYEVMSIPTLIVFKDGQ--PVDKVVGFQPKENLAEVLD 101          
BLAST of EY664520 vs. ExPASy Swiss-Prot
Match: THIO_PASMU (Thioredoxin OS=Pasteurella multocida GN=trxA PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.958e-14
Identity = 39/99 (39.39%), Postives = 65/99 (65.66%), Query Frame = 1
Query:  310 TESEFPNTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDHDANPQLIEEYKVYGLPTLILFKNGQEVPESRREGAITKLKLKEYID 606
            T++ F   V+ S+ PVL++F A WCGPCR+++P ++ +A E+  ++ VVKI+ D N     +  V  +PTL+LFKNG+ V  + + GA+ K +L  +I+
Sbjct:    7 TDATFTADVVNSDVPVLLDFWAPWCGPCRMISPILDEIAAEFSGKVKVVKINIDENQATPAQLGVRSIPTLVLFKNGKAV--ATQVGALPKNQLANFIN 103          
BLAST of EY664520 vs. ExPASy Swiss-Prot
Match: THIO_CHLLT (Thioredoxin OS=Chlorobium limicola f.sp. thiosulfatophilum GN=trxA PE=1 SV=5)

HSP 1 Score: 79.7221 bits (195), Expect = 2.558e-14
Identity = 35/101 (34.65%), Postives = 61/101 (60.40%), Query Frame = 1
Query:  304 EITESEFPNTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDHDANPQLIEEYKVYGLPTLILFKNGQEVPESRREGAITKLKLKEYID 606
            E T+  F   +L S++ VLV+F A+WCGPC ++ P +E LA +Y  +  + K++ D NP +  +Y +  +PT+++ K G+ V   +  GA+ K  + + ID
Sbjct:    6 EATDKNFQTEILDSDKAVLVDFWASWCGPCMMLGPVIEQLADDYEGKAIIAKLNVDENPNIAGQYGIRSIPTMLIIKGGKVV--DQMVGALPKNMIAKKID 104          
BLAST of EY664520 vs. ExPASy Swiss-Prot
Match: THIO1_SYNY3 (Thioredoxin-like protein slr0233 OS=Synechocystis sp. (strain PCC 6803) GN=slr0233 PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.558e-14
Identity = 37/85 (43.53%), Postives = 53/85 (62.35%), Query Frame = 1
Query:  316 SEFPNTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDHDANPQLIEEYKVYGLPTLILFKNGQEVPESRREG 570
            + F   +  S +PVLV+F A WCGPC+++AP +E +      ++ VVKID D  P +  +Y++  LPTL+LFK GQ  P  R EG
Sbjct:    8 ANFAEMLAGSPKPVLVDFYATWCGPCQMMAPILEQVGSHLRQQIQVVKIDTDKYPAIATQYQIQSLPTLVLFKQGQ--PVHRMEG 90          
BLAST of EY664520 vs. ExPASy Swiss-Prot
Match: THIO3_CORNE (Thioredoxin C-3 OS=Corynebacterium nephridii PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.340e-14
Identity = 44/129 (34.11%), Postives = 69/129 (53.49%), Query Frame = 1
Query:  259 KLAIRVRCGASSGIT------EITESEFPNTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDHDANPQLIEEYKVYGLPTLILFKNGQEVPESRREGAITKLKLKEYIDTLLDSSQ 627
            KLA+   CG            E+ E  F N +  S+ PVL++  A WCGPC+++AP    +A++    +   KID +ANP+L   + V  +PTL+L     EV  +R  GA+  L+L++++D  L   Q
Sbjct:   18 KLAVHPNCGQCHQALLPLEPIELNEQNFSNFISNSDLPVLIDLWAEWCGPCKMMAPHFAQVAKQ-NPYVVFAKIDTEANPRLSAAFNVRSIPTLVLMNKTTEV--ARISGALRTLELQQWLDQQLQQQQ 143          
The following BLAST results are available for this feature:
BLAST of EY664520 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 99
Match NameE-valueIdentityDescription
THIO_STAAN1.958e-1438.83Thioredoxin OS=Staphylococcus aureus (strain N315)... [more]
THIO_STAAM1.958e-1438.83Thioredoxin OS=Staphylococcus aureus (strain Mu50 ... [more]
THIO_STAAC1.958e-1438.83Thioredoxin OS=Staphylococcus aureus (strain COL) ... [more]
THIO_STAAB1.958e-1438.83Thioredoxin OS=Staphylococcus aureus (strain bovin... [more]
THIO_STAA81.958e-1438.83Thioredoxin OS=Staphylococcus aureus (strain NCTC ... [more]
THIO_STAA31.958e-1438.83Thioredoxin OS=Staphylococcus aureus (strain USA30... [more]
THIO_PASMU1.958e-1439.39Thioredoxin OS=Pasteurella multocida GN=trxA PE=3 ... [more]
THIO_CHLLT2.558e-1434.65Thioredoxin OS=Chlorobium limicola f.sp. thiosulfa... [more]
THIO1_SYNY32.558e-1443.53Thioredoxin-like protein slr0233 OS=Synechocystis ... [more]
THIO3_CORNE3.340e-1434.11Thioredoxin C-3 OS=Corynebacterium nephridii PE=3 ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-067-E02-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY664520 ID=EY664520; Name=EY664520; organism=Citrus sinensis; type=EST; length=916bp
CCACGCGTCCGAATTCAAAAAGAAAAGAAAATGCTCTAAAAATCTTTAAT
CACTTGCAAAATGGATATCGTCTTCTCCAACTCCACTTTATTGTTCAGAC
AACAACCACTGGTTGCTCCTGTTCGTACAGTTACTGGGACCCACAGGCAA
CAGAACATCATCACCAGCGCTACAACAACAACAACGTCGTCAAAGAATCA
GCTATTGTTCGGGTCTCGAACGAACCTCTCACTAAAGTCTTATAATAATT
CGCTTCCCAAGTTGGCAATACGCGTACGCTGCGGTGCTAGCAGTGGCATA
ACGGAGATTACCGAAAGTGAGTTCCCAAACACGGTCTTGAAATCTGAGCG
TCCGGTTCTTGTCGAGTTCGTGGCCAATTGGTGCGGTCCTTGCCGCTTGG
TTGCTCCCGCCGTCGAATGGCTCGCCCAGGAATACGGAGACAGATTGACT
GTCGTAAAGATTGATCATGACGCAAACCCACAACTAATAGAGGAATACAA
AGTTTATGGATTGCCGACCTTGATTCTCTTCAAGAATGGACAGGAAGTTC
CGGAAAGCAGGAGGGAAGGTGCAATTACTAAGTTGAAGCTTAAAGAGTAT
ATTGATACTCTTTTAGATTCATCTCAGTGGCTTAGCCCTCTTTTGACATG
CTCAGCAAATATGCTCGGTCTTCACAGATTTTGACATCATTGGCAAAGAC
GAATATGGGTAAATATTTACTTTTTCCTTATGAAACCTGGATCATTCGGT
ACAGAACCCGTGGATGGATTCAATTGNATATTTTGGATCCATGGAACAGA
ATTATCATACTAATTTCTGGATATCCAACCGGCCCCAATTGGTTTTTCAT
TTCTTTAAAAAAAAAAAAAAAAAAAGGGCGGCCCTTTAAAGGTACAAATT
TAACTACCCGGAATTG
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