EY664520

Overview
NameEY664520
Unique NameEY664520
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length916
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY664520 vs. ExPASy Swiss-Prot
Match: THIO_MYCGA (Thioredoxin OS=Mycoplasma gallisepticum GN=trxA PE=3 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 9.097e-12
Identity = 37/99 (37.37%), Postives = 61/99 (61.62%), Query Frame = 1
Query:  307 ITESEFPNTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDHDANPQLIEEYKVYGLPTLILFKNGQEVPESRREGAITKLKLKEYI 603
            IT     + +L + + V+V+F ANWCGPC+++ P  E +AQ+  D  T VK+D D   ++  EY++  +PT+I F++G+     +R G I K +LKE +
Sbjct:    4 ITNKAELDQLLSTNKKVVVDFYANWCGPCKILGPIFEEVAQDKKD-WTFVKVDVDQANEISSEYEIRSIPTVIFFQDGKMA--DKRIGFIPKNELKELL 99          
BLAST of EY664520 vs. ExPASy Swiss-Prot
Match: TIGA_ASPNG (Protein disulfide-isomerase tigA OS=Aspergillus niger GN=tigA PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.188e-11
Identity = 36/97 (37.11%), Postives = 54/97 (55.67%), Query Frame = 1
Query:  289 SSGITEITESEFPNTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQEY---GDRLTVVKIDHDANPQLIEEYKVYGLPTLILFKNGQEVPESRREG 570
            ++ + ++    F + VLKS +P LVEF A WCG C+ +AP  E L Q +    D++TV K+D D +  L  ++ V G PTL  F    + PE  + G
Sbjct:   18 TAAVVDLVPKNFDDVVLKSGKPALVEFFAPWCGHCKNLAPVYEELGQAFAHASDKVTVGKVDADEHRDLGRKFGVQGFPTLKWFDGKSDEPEDYKGG 114          
BLAST of EY664520 vs. ExPASy Swiss-Prot
Match: THIO_EMENI (Thioredoxin OS=Emericella nidulans GN=TRX1 PE=1 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 4.515e-11
Identity = 37/92 (40.22%), Postives = 56/92 (60.87%), Query Frame = 1
Query:  283 GASSGITEIT-ESEFPNTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDHDANPQLIEEYKVYGLPTLILFKNGQEVPE 555
            GAS  +  IT ++EF   VL ++  V+V+  A WCGPC+ +AP VE  AQ Y D  +  +ID D   ++  E  +  +PT +LFK+GQ+V +
Sbjct:    2 GASEHVPPITSKAEFQEKVLNAKGFVVVDCFATWCGPCKAIAPTVEKFAQTYTD-ASFYQIDVDELSEVAAELGIRAMPTFLLFKDGQKVSD 92          
BLAST of EY664520 vs. ExPASy Swiss-Prot
Match: THIOM_RAT (Thioredoxin, mitochondrial OS=Rattus norvegicus GN=Txn2 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.515e-11
Identity = 29/77 (37.66%), Postives = 49/77 (63.64%), Query Frame = 1
Query:  319 EFPNTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDHDANPQLIEEYKVYGLPTLILFKNGQEV 549
            +F + V+ SE PV+V+F A WCGPC+++ P +E +  +   ++ + K+D D +  L  EY+V  +PT++  KNG  V
Sbjct:   69 DFQDRVVNSETPVVVDFHAQWCGPCKILGPRLEKMVAKQHGKVVMAKVDIDDHTDLAIEYEVSAVPTVLAIKNGDVV 145          
BLAST of EY664520 vs. ExPASy Swiss-Prot
Match: THIOM_MOUSE (Thioredoxin, mitochondrial OS=Mus musculus GN=Txn2 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.515e-11
Identity = 29/77 (37.66%), Postives = 49/77 (63.64%), Query Frame = 1
Query:  319 EFPNTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDHDANPQLIEEYKVYGLPTLILFKNGQEV 549
            +F + V+ SE PV+V+F A WCGPC+++ P +E +  +   ++ + K+D D +  L  EY+V  +PT++  KNG  V
Sbjct:   69 DFQDRVVNSETPVVVDFHAQWCGPCKILGPRLEKMVAKQHGKVVMAKVDIDDHTDLAIEYEVSAVPTVLAIKNGDVV 145          
BLAST of EY664520 vs. ExPASy Swiss-Prot
Match: THIOM_HUMAN (Thioredoxin, mitochondrial OS=Homo sapiens GN=TXN2 PE=1 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 4.515e-11
Identity = 29/77 (37.66%), Postives = 49/77 (63.64%), Query Frame = 1
Query:  319 EFPNTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDHDANPQLIEEYKVYGLPTLILFKNGQEV 549
            +F + V+ SE PV+V+F A WCGPC+++ P +E +  +   ++ + K+D D +  L  EY+V  +PT++  KNG  V
Sbjct:   69 DFQDRVVNSETPVVVDFHAQWCGPCKILGPRLEKMVAKQHGKVVMAKVDIDDHTDLAIEYEVSAVPTVLAMKNGDVV 145          
BLAST of EY664520 vs. ExPASy Swiss-Prot
Match: TRXH2_ARATH (Thioredoxin H-type 2 OS=Arabidopsis thaliana GN=TRX2 PE=2 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 5.897e-11
Identity = 28/74 (37.84%), Postives = 50/74 (67.57%), Query Frame = 1
Query:  328 NTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDHDANPQLIEEYKVYGLPTLILFKNGQEV 549
            N + +S + ++V+F A+WCGPCR++ PA+  +A ++ D +  VK+D D  P + +E+ V  +PT +L K G+E+
Sbjct:   41 NEIKESNKLLVVDFSASWCGPCRMIEPAIHAMADKFND-VDFVKLDVDELPDVAKEFNVTAMPTFVLVKRGKEI 113          
BLAST of EY664520 vs. ExPASy Swiss-Prot
Match: THIOM_BOVIN (Thioredoxin, mitochondrial OS=Bos taurus GN=TXN2 PE=1 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 5.897e-11
Identity = 29/77 (37.66%), Postives = 49/77 (63.64%), Query Frame = 1
Query:  319 EFPNTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDHDANPQLIEEYKVYGLPTLILFKNGQEV 549
            +F + V+ SE PV+V+F A WCGPC+++ P +E +  +   ++ + K+D D +  L  EY+V  +PT++  KNG  V
Sbjct:   69 DFQDRVVNSETPVVVDFHAQWCGPCKILGPRLEKVVAKQHGKVVMAKVDIDDHTDLALEYEVSAVPTVLAMKNGDVV 145          
BLAST of EY664520 vs. ExPASy Swiss-Prot
Match: NGLY1_CAEEL (Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase OS=Caenorhabditis elegans GN=F56G4.5 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.897e-11
Identity = 30/87 (34.48%), Postives = 53/87 (60.92%), Query Frame = 1
Query:  298 ITEITESEFPNTVLK---SERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDHDANPQLIEEYKVYGLPTLILFKNGQEV 549
            +TE+      N +L+   + R ++++F ANWCGPCR+++P  E  + EYG+  T +K++ D    +++ Y +  +PT I  KN Q+V
Sbjct:    3 VTEVGSLPELNNILERSDANRLIIIDFFANWCGPCRMISPIFEQFSAEYGN-ATFLKVNCDVARDIVQRYNISAMPTFIFLKNRQQV 88          
The following BLAST results are available for this feature:
BLAST of EY664520 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 99
Match NameE-valueIdentityDescription
THIO_MYCGA9.097e-1237.37Thioredoxin OS=Mycoplasma gallisepticum GN=trxA PE... [more]
TIGA_ASPNG1.188e-1137.11Protein disulfide-isomerase tigA OS=Aspergillus ni... [more]
THIO_EMENI4.515e-1140.22Thioredoxin OS=Emericella nidulans GN=TRX1 PE=1 SV... [more]
THIOM_RAT4.515e-1137.66Thioredoxin, mitochondrial OS=Rattus norvegicus GN... [more]
THIOM_MOUSE4.515e-1137.66Thioredoxin, mitochondrial OS=Mus musculus GN=Txn2... [more]
THIOM_HUMAN4.515e-1137.66Thioredoxin, mitochondrial OS=Homo sapiens GN=TXN2... [more]
TRXH2_ARATH5.897e-1137.84Thioredoxin H-type 2 OS=Arabidopsis thaliana GN=TR... [more]
THIOM_BOVIN5.897e-1137.66Thioredoxin, mitochondrial OS=Bos taurus GN=TXN2 P... [more]
NGLY1_CAEEL5.897e-1134.48Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagin... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-067-E02-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY664520 ID=EY664520; Name=EY664520; organism=Citrus sinensis; type=EST; length=916bp
CCACGCGTCCGAATTCAAAAAGAAAAGAAAATGCTCTAAAAATCTTTAAT
CACTTGCAAAATGGATATCGTCTTCTCCAACTCCACTTTATTGTTCAGAC
AACAACCACTGGTTGCTCCTGTTCGTACAGTTACTGGGACCCACAGGCAA
CAGAACATCATCACCAGCGCTACAACAACAACAACGTCGTCAAAGAATCA
GCTATTGTTCGGGTCTCGAACGAACCTCTCACTAAAGTCTTATAATAATT
CGCTTCCCAAGTTGGCAATACGCGTACGCTGCGGTGCTAGCAGTGGCATA
ACGGAGATTACCGAAAGTGAGTTCCCAAACACGGTCTTGAAATCTGAGCG
TCCGGTTCTTGTCGAGTTCGTGGCCAATTGGTGCGGTCCTTGCCGCTTGG
TTGCTCCCGCCGTCGAATGGCTCGCCCAGGAATACGGAGACAGATTGACT
GTCGTAAAGATTGATCATGACGCAAACCCACAACTAATAGAGGAATACAA
AGTTTATGGATTGCCGACCTTGATTCTCTTCAAGAATGGACAGGAAGTTC
CGGAAAGCAGGAGGGAAGGTGCAATTACTAAGTTGAAGCTTAAAGAGTAT
ATTGATACTCTTTTAGATTCATCTCAGTGGCTTAGCCCTCTTTTGACATG
CTCAGCAAATATGCTCGGTCTTCACAGATTTTGACATCATTGGCAAAGAC
GAATATGGGTAAATATTTACTTTTTCCTTATGAAACCTGGATCATTCGGT
ACAGAACCCGTGGATGGATTCAATTGNATATTTTGGATCCATGGAACAGA
ATTATCATACTAATTTCTGGATATCCAACCGGCCCCAATTGGTTTTTCAT
TTCTTTAAAAAAAAAAAAAAAAAAAGGGCGGCCCTTTAAAGGTACAAATT
TAACTACCCGGAATTG
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