CX671796 | Citrus Genome Database

Overview


Name	CX671796
Unique Name	CX671796
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	897

Libraries


Library Name	Type
Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

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BLAST of CX671796 vs. ExPASy Swiss-Prot
Match: CATA3_SOYBN (Catalase-3 OS=Glycine max GN=CAT3 PE=2 SV=1)

HSP 1 Score: 411.379 bits (1056), Expect = 3.571e-114
Identity = 181/231 (78.35%), Postives = 206/231 (89.18%), Query Frame = -2

Query:  204 GNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNVRPSI 896
            GNYPEWKLYIQT+DP++ED+ DFDPLDVTK WPED++PLQPVGR+VLNKNIDNFFAENE LAF P I+VPG+YYS+DK+LQ RIF+Y DTQRHRLGPNYL LP N+PKC H NNH+DGFMNFMHRDEEV+YFPSRYDP RHAER P+P   + G+REK  IEKENNFKQPGERYRSW  DRQERF+ RW+ AL DPRVTHE+RSIW+SYWSQADRSLGQK+AS LN++PSI
Sbjct:  262 GNYPEWKLYIQTLDPENEDRLDFDPLDVTKTWPEDVLPLQPVGRMVLNKNIDNFFAENEQLAFCPAIIVPGVYYSDDKLLQTRIFSYADTQRHRLGPNYLQLPANSPKCAHHNNHHDGFMNFMHRDEEVNYFPSRYDPVRHAERVPVPPRTLGGKREKCMIEKENNFKQPGERYRSWPSDRQERFVRRWVDALSDPRVTHEIRSIWISYWSQADRSLGQKIASHLNLKPSI 492

[Close]

BLAST of CX671796 vs. ExPASy Swiss-Prot
Match: CATA_SOLAP (Catalase OS=Soldanella alpina PE=2 SV=1)

HSP 1 Score: 410.609 bits (1054), Expect = 6.091e-114
Identity = 182/231 (78.79%), Postives = 210/231 (90.91%), Query Frame = -2

Query:  204 GNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNVRPSI 896
            GNYPEWKL+IQ I+PDHED+FDFDPLDVTK WPEDIIPL PVGRLVLNKNIDNFFAENE LAF P ++VPG+YYS+DK+LQ RIF+Y DTQRHRLGPNYL LP NAPKC H NNH++G MNFMHRDEEV+YFPSR+DP RHAER+PIP  V+TG+R++  IEKENNFKQPGERYR++APDRQERF+ RW+ AL DPRVTHE+RSIW+SYW+QAD+SLGQKLASRLNVRP++
Sbjct:  262 GNYPEWKLFIQIIEPDHEDKFDFDPLDVTKTWPEDIIPLMPVGRLVLNKNIDNFFAENEQLAFCPALIVPGVYYSDDKLLQTRIFSYADTQRHRLGPNYLQLPPNAPKCAHHNNHHEGLMNFMHRDEEVNYFPSRFDPVRHAERHPIPPPVLTGKRDRCMIEKENNFKQPGERYRTFAPDRQERFVCRWVDALSDPRVTHEIRSIWISYWTQADKSLGQKLASRLNVRPTM 492

[Close]

BLAST of CX671796 vs. ExPASy Swiss-Prot
Match: CATA1_WHEAT (Catalase-1 OS=Triticum aestivum GN=CAT1 PE=2 SV=1)

HSP 1 Score: 408.683 bits (1049), Expect = 2.315e-113
Identity = 181/231 (78.35%), Postives = 207/231 (89.61%), Query Frame = -2

Query:  204 GNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNVRPSI 896
            GNYPEW  YIQTIDPD+E++FDFDPLDVTK WPED++PLQPVGRLVLN+NIDNFF+ENE LAF PGI+VPG+YYS+DK+LQ RIF+Y DTQRHRLGPNYL+LP NAPKC H NNHYDG MNFMHRDEEVDYFPSR+DP +HA RYPIPS  + GRREK  IEKENNFKQPGERYRS  P RQERF+NRWI AL DPR+THE+++IW+SYWSQAD+SLGQKLASRL+ +PS+
Sbjct:  262 GNYPEWTFYIQTIDPDYEERFDFDPLDVTKTWPEDVVPLQPVGRLVLNRNIDNFFSENEQLAFCPGIIVPGVYYSDDKLLQTRIFSYSDTQRHRLGPNYLLLPANAPKCSHHNNHYDGLMNFMHRDEEVDYFPSRFDPAKHAPRYPIPSRTLNGRREKMVIEKENNFKQPGERYRSMDPARQERFINRWIDALSDPRLTHEIKAIWLSYWSQADKSLGQKLASRLSSKPSM 492

[Close]

BLAST of CX671796 vs. ExPASy Swiss-Prot
Match: CATA1_RICCO (Catalase isozyme 1 OS=Ricinus communis GN=CAT1 PE=2 SV=2)

HSP 1 Score: 406.371 bits (1043), Expect = 1.149e-112
Identity = 183/231 (79.22%), Postives = 206/231 (89.18%), Query Frame = -2

Query:  204 GNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNVRPSI 896
            GNYPEWKLYIQ +DP HED+FDFDPLDVTK WPEDI+PLQPVGRLVLNKNIDNFFAENE LAF PGIVVPG+ YS DK+LQ RIF+Y DTQRHRLGPNYL LPVNAPKC H NNH++GFMNFMHRDEEV+YFPSR DP R+AE +P+PS + +G+REK  IEKENNFKQPGERYRSWAPDRQERFLNR +  L DPR+THE+R+IW+SYW Q D+SLGQKLA+RLNV+PSI
Sbjct:  262 GNYPEWKLYIQIMDPAHEDKFDFDPLDVTKTWPEDILPLQPVGRLVLNKNIDNFFAENEQLAFCPGIVVPGVSYSEDKLLQTRIFSYSDTQRHRLGPNYLQLPVNAPKCAHHNNHHEGFMNFMHRDEEVNYFPSRCDPARNAESFPVPSAICSGKREKCVIEKENNFKQPGERYRSWAPDRQERFLNRLVGGLSDPRITHELRTIWISYWIQCDKSLGQKLATRLNVKPSI 492

[Close]

BLAST of CX671796 vs. ExPASy Swiss-Prot
Match: CATA2_ARATH (Catalase-2 OS=Arabidopsis thaliana GN=CAT2 PE=1 SV=3)

HSP 1 Score: 405.601 bits (1041), Expect = 1.960e-112
Identity = 181/231 (78.35%), Postives = 207/231 (89.61%), Query Frame = -2

Query:  204 GNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNVRPSI 896
            GNYPEWKL+IQ IDP  ED+FDFDPLDVTK WPEDI+PLQPVGR+VLNKNIDNFFAENE LAF P I+VPGI+YS+DK+LQ R+F+Y DTQRHRLGPNYL LPVNAPKC H NNH++GFMNFMHRDEEV+YFPSRYD  RHAE+YP P  V +G+RE+  IEKENNFK+PGERYR++ P+RQERF+ RWI AL DPR+THE+RSIW+SYWSQAD+SLGQKLASRLNVRPSI
Sbjct:  262 GNYPEWKLFIQIIDPADEDKFDFDPLDVTKTWPEDILPLQPVGRMVLNKNIDNFFAENEQLAFCPAIIVPGIHYSDDKLLQTRVFSYADTQRHRLGPNYLQLPVNAPKCAHHNNHHEGFMNFMHRDEEVNYFPSRYDQVRHAEKYPTPPAVCSGKRERCIIEKENNFKEPGERYRTFTPERQERFIQRWIDALSDPRITHEIRSIWISYWSQADKSLGQKLASRLNVRPSI 492

[Close]

BLAST of CX671796 vs. ExPASy Swiss-Prot
Match: CATA_IPOBA (Catalase OS=Ipomoea batatas PE=2 SV=1)

HSP 1 Score: 405.216 bits (1040), Expect = 2.559e-112
Identity = 176/231 (76.19%), Postives = 210/231 (90.91%), Query Frame = -2

Query:  204 GNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNVRPSI 896
            GNYPEWKLYIQ +DPDHED+FDFDPLD TK WPE++IPLQPVGR+VLNKNIDNFFAENEMLA +P  +VPGIY+S+DKMLQ R+FAY DT RHRLGPNY++LPVNAPKC H NN YDG+MNF+HRDEEVDYFPS++D TR+AER+P P  ++TG+R+K  IEKENNFKQPG+RYRSWAPDRQ+RF+NRW+KAL +PRVTHE+RS W+SY +QADRSLGQK+ASRLN+RP++
Sbjct:  262 GNYPEWKLYIQVMDPDHEDRFDFDPLDTTKIWPEELIPLQPVGRMVLNKNIDNFFAENEMLAMDPAHIVPGIYFSDDKMLQARVFAYADTHRHRLGPNYMLLPVNAPKCAHHNNSYDGYMNFVHRDEEVDYFPSKFDNTRNAERFPTPLRIVTGQRDKCVIEKENNFKQPGDRYRSWAPDRQDRFINRWVKALSEPRVTHEIRSTWISYLTQADRSLGQKVASRLNIRPTM 492

[Close]

BLAST of CX671796 vs. ExPASy Swiss-Prot
Match: CATA3_ARATH (Catalase-3 OS=Arabidopsis thaliana GN=CAT3 PE=1 SV=3)

HSP 1 Score: 401.364 bits (1030), Expect = 3.696e-111
Identity = 178/231 (77.06%), Postives = 206/231 (89.18%), Query Frame = -2

Query:  204 GNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNVRPSI 896
            GNYPEWKL+IQT+DP  ED+FDFDPLDVTK WPEDI+PLQPVGRLVLN+ IDNFF E E LAFNPG+VVPGIYYS+DK+LQCRIFAYGDTQRHRLGPNYL LPVNAPKC H NNH++GFMNFMHRDEE++Y+PS++DP R AE+ P P++  TG R K  I+KENNFKQ G+RYRSWAPDRQ+RF+ RW++ L +PR+THE+R IW+SYWSQADRSLGQKLASRLNVRPSI
Sbjct:  262 GNYPEWKLFIQTMDPADEDKFDFDPLDVTKIWPEDILPLQPVGRLVLNRTIDNFFNETEQLAFNPGLVVPGIYYSDDKLLQCRIFAYGDTQRHRLGPNYLQLPVNAPKCAHHNNHHEGFMNFMHRDEEINYYPSKFDPVRCAEKVPTPTNSYTGIRTKCVIKKENNFKQAGDRYRSWAPDRQDRFVKRWVEILSEPRLTHEIRGIWISYWSQADRSLGQKLASRLNVRPSI 492

[Close]

BLAST of CX671796 vs. ExPASy Swiss-Prot
Match: CATA2_SOLLC (Catalase isozyme 2 OS=Solanum lycopersicum GN=CAT2 PE=2 SV=1)

HSP 1 Score: 400.208 bits (1027), Expect = 8.233e-111
Identity = 181/231 (78.35%), Postives = 203/231 (87.88%), Query Frame = -2

Query:  204 GNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNVRPSI 896
            GNYPEWK  IQ + P+HED+FDFDPLDVTK WPEDI+PLQPVGRLVLNKNIDNF   NE LAF P IVVPG+YYS+DKMLQ RIF+Y DTQR+RLGPNYL LP NAPKC H NNHYDG MNFMHRDEE+DYFPSRYD  RHAE YPIPS V +G+REK  I+KENNFKQPGERYRS+ PDRQERF+ RW++AL DPR+T+E+RSIW++YWSQAD+SLGQKLASRLNVRPSI
Sbjct:  262 GNYPEWKPSIQIMGPEHEDKFDFDPLDVTKTWPEDILPLQPVGRLVLNKNIDNFLYMNEQLAFCPSIVVPGVYYSDDKMLQTRIFSYSDTQRYRLGPNYLQLPANAPKCAHHNNHYDGSMNFMHRDEEIDYFPSRYDQVRHAEVYPIPSTVCSGKREKCIIQKENNFKQPGERYRSFTPDRQERFIRRWVEALSDPRITYEIRSIWITYWSQADKSLGQKLASRLNVRPSI 492

[Close]

BLAST of CX671796 vs. ExPASy Swiss-Prot
Match: CATA2_ORYSI (Catalase isozyme B OS=Oryza sativa subsp. indica GN=CATB PE=2 SV=2)

HSP 1 Score: 399.823 bits (1026), Expect = 1.075e-110
Identity = 181/231 (78.35%), Postives = 205/231 (88.74%), Query Frame = -2

Query:  204 GNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNVRPSI 896
            GNYPEWKLYIQTIDPDHED+FDFDPLDVTK WPEDIIPLQPVGR+VLNKNIDNFFAENE LAF P I+VPGI+YS+DK+LQ RIF+Y DTQRHRLGPNYLMLPVNAPKC + NNH+DG MNFMHRDEEV+YFPSR+D  RHAE+ PIP  V+TG REK  I+KENNFKQ GERYRS+ P RQ+RFL RW+ AL DPR+THE+R IW+SYWSQ D SLGQKLASRLN++P++
Sbjct:  262 GNYPEWKLYIQTIDPDHEDRFDFDPLDVTKTWPEDIIPLQPVGRMVLNKNIDNFFAENEQLAFCPAIIVPGIHYSDDKLLQTRIFSYADTQRHRLGPNYLMLPVNAPKCAYHNNHHDGSMNFMHRDEEVNYFPSRFDAARHAEKVPIPPRVLTGCREKCVIDKENNFKQAGERYRSFDPARQDRFLQRWVDALSDPRITHELRGIWISYWSQCDASLGQKLASRLNLKPNM 492

[Close]

BLAST of CX671796 vs. ExPASy Swiss-Prot
Match: CATA2_ORYSJ (Catalase isozyme B OS=Oryza sativa subsp. japonica GN=CATB PE=2 SV=1)

HSP 1 Score: 398.282 bits (1022), Expect = 3.128e-110
Identity = 180/231 (77.92%), Postives = 205/231 (88.74%), Query Frame = -2

Query:  204 GNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNVRPSI 896
            GNYPEWKLYIQTIDPDHED+FDFDPLDVTK WPEDIIPLQPVGR+VLNKNIDNFFAENE LAF P I+VPGI+YS+DK+LQ RIF+Y DTQRHRLGPNYLMLPVNAPKC + NNH+DG MNFMHRDEEV+YFPSR+D  RHAE+ PIP  V+TG REK  I+KENNF+Q GERYRS+ P RQ+RFL RW+ AL DPR+THE+R IW+SYWSQ D SLGQKLASRLN++P++
Sbjct:  262 GNYPEWKLYIQTIDPDHEDRFDFDPLDVTKTWPEDIIPLQPVGRMVLNKNIDNFFAENEQLAFCPAIIVPGIHYSDDKLLQTRIFSYADTQRHRLGPNYLMLPVNAPKCAYHNNHHDGSMNFMHRDEEVNYFPSRFDAARHAEKVPIPPRVLTGCREKCVIDKENNFQQAGERYRSFDPARQDRFLQRWVDALSDPRITHELRGIWISYWSQCDASLGQKLASRLNLKPNM 492

The following BLAST results are available for this feature:

BLAST of CX671796 vs. ExPASy Swiss-Prot

BLAST of CX671796 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 141


Match Name	E-value	Identity	Description
CATA3_SOYBN	3.571e-114	78.35	Catalase-3 OS=Glycine max GN=CAT3 PE=2 SV=1	[more]
CATA_SOLAP	6.091e-114	78.79	Catalase OS=Soldanella alpina PE=2 SV=1	[more]
CATA1_WHEAT	2.315e-113	78.35	Catalase-1 OS=Triticum aestivum GN=CAT1 PE=2 SV=1	[more]
CATA1_RICCO	1.149e-112	79.22	Catalase isozyme 1 OS=Ricinus communis GN=CAT1 PE=...	[more]
CATA2_ARATH	1.960e-112	78.35	Catalase-2 OS=Arabidopsis thaliana GN=CAT2 PE=1 SV...	[more]
CATA_IPOBA	2.559e-112	76.19	Catalase OS=Ipomoea batatas PE=2 SV=1	[more]
CATA3_ARATH	3.696e-111	77.06	Catalase-3 OS=Arabidopsis thaliana GN=CAT3 PE=1 SV...	[more]
CATA2_SOLLC	8.233e-111	78.35	Catalase isozyme 2 OS=Solanum lycopersicum GN=CAT2...	[more]
CATA2_ORYSI	1.075e-110	78.35	Catalase isozyme B OS=Oryza sativa subsp. indica G...	[more]
CATA2_ORYSJ	3.128e-110	77.92	Catalase isozyme B OS=Oryza sativa subsp. japonica...	[more]

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Properties


Property Name	Value
Genbank description	UCRCS10_13B12_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-13B12-C23-6.b, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>CX671796 ID=CX671796; Name=CX671796; organism=Citrus sinensis; type=EST; length=897bp
TTTGAACTTCATAAAACAGACTTTTATTAATTGAAACAACAGGAAAAGAG
TCACATAACATGCAAGTTTATTTTCTATATTACAATATACAACAGCAAAC
ATAGGATCGAAATTCTTCACATAGCTGCACCCTTGGTGTTCACTCCTTGC
TCACTCTTGGCAAGTCAAAAGCATCCAGTGTTCCAGTTCAAGTGACACCT
TCAAATGCTTGGCCTCACATTGAGACGAGAAGCTAGCTTCTGACCCAGAG
ATCTGTCGGCCTGAGACCAGTAAGAGACCCATATGCTGCGAACCTCATGG
GTGACACGTGGGTCACATAAAGCCTTAATCCATCGATTAAGGAACCTCTC
TTGCCTGTCTGGGGCCCAGGATCGGTATCTCTCTCCAGGCTGCTTGAAGT
TGTTTTCCTTCTCAATGCAAGCCTTCTCACGCCTTCCTGTAATTACATCA
GAAGGAATGGGATATCTCTCAGCATGACGAGTAGGATCATACCTCGAAGG
AAAGTAATCGACCTCCTCATCCCTGTGCATGAAATTCATGAAACCATCAT
AATGATTGTTGCGATGAGGACATTTGGGTGCATTAACTGGAAGCATCAAG
TAGTTGGGTCCAAGGCGATGCCTCTGGGTATCACCATAGGCAAAGATTCG
ACATTGGAGCATCTTATCATTTGAGTAGTAGATCCCAGGAACCACGATAC
CAGGGTTAAATGCAAGCATTTCATTTTCCGCAAAGAAATTATCGATGTTC
TTGTTCAAGACCAAGCGTCCAACTGGCTGCAGAGGGATGATGTCCTCAGG
CCACCACTTGGTTACGTCCAGTGGGTCAAAGTCAAATTGGTCCTCGTGAT
CGGGATCAATAGTCTGAATGTAGAGTTTCCACTCAGGATAGTTTCCA