CX671790

Overview
NameCX671790
Unique NameCX671790
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length734
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671790 vs. ExPASy Swiss-Prot
Match: FPRA_MYCLE (NADPH-ferredoxin reductase fprA OS=Mycobacterium leprae GN=fprA PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.896e-16
Identity = 54/158 (34.18%), Postives = 83/158 (52.53%), Query Frame = -1
Query:  249 AVGTGEFEDLDCGMVLKSIGYKSVPVNGLPFDNHKGIVPNIRGRVLKNISGDFSQVENGLYVCGGLKRGPTGIIATNFYCAEETVASISEDLEQGVLASSSGLPKPGREGLLQLLDNRNVRPVPFSAWEKIDFEEKRLGSLRNKPKEKLTTYEDLLKV 722
            A  TG  E+L   ++++SIGY+ VP  GLPFD+    +PN  GRV    +G  ++     YV G +KRGPTG+I TN   +++TV ++ E+L         G     R  L + L  R  + V  + W+ ID  E+  G    +P+ KL    +LL++
Sbjct:  307 AKDTGVREELPAQLIVRSIGYRGVPTPGLPFDDSSVTIPNTNGRV----NGSRNE-----YVVGWIKRGPTGVIGTNKKDSQDTVDTLMENLAGANDTEKFGADHADR--LAEWLAERQPKLVTSAHWQAIDRFERAAGEPHGRPRVKLPNLAELLRI 453          
BLAST of CX671790 vs. ExPASy Swiss-Prot
Match: ADRO_DICDI (Probable NADPH:adrenodoxin oxidoreductase, mitochondrial OS=Dictyostelium discoideum GN=fdxr PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.233e-16
Identity = 54/165 (32.73%), Postives = 91/165 (55.15%), Query Frame = -1
Query:  249 RKQYAVGTGEFEDLDCGMVLKSIGY---KSVPVNGLPFDNHKGIVPNIRGRVLKNISGDFSQVENGLYVCGGLKRGPTGIIATNFYCAEETVASISEDLEQGVLASSSGLPKPGREGLLQLLDNRNVRPVPFSAWEKIDFEEKRLGSLRNKPKEKLTTYEDLLKV 734
            +++ A+G+GEFE ++C  + +SIGY   K  P   +PFD +   +PN  G+VL+  + D  +  NGLYV G LK GP+G I      +EET + I +D E     +++     G   +  LL   N + + F+ ++KI+ EE + G  + K  EK+  +++L  +
Sbjct:  352 QQKKAIGSGEFEIIECSSLFRSIGYTGTKQFP--SVPFDFNSVSIPNKYGKVLEEPNSD--KFINGLYVSGWLKGGPSGSIPNISANSEETASIIHQDYESNQFINNNNNNDGGHNSITSLL-QPNHKIINFNDYKKIESEEVKRGKEKGKLLEKIIVFDELKNI 511          
The following BLAST results are available for this feature:
BLAST of CX671790 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
FPRA_MYCLE1.896e-1634.18NADPH-ferredoxin reductase fprA OS=Mycobacterium l... [more]
ADRO_DICDI3.233e-1632.73Probable NADPH:adrenodoxin oxidoreductase, mitocho... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_13B09_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-13B09-C17-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671790 ID=CX671790; Name=CX671790; organism=Citrus sinensis; type=EST; length=734bp
TTTTTTTTTTTTTTTTTATTAAAAAATTCATTAATCTTTCATAATGAAGG
AAAAAAACTGAATAATCCATAAAGCTCCTTACAAAAATCAAAAATCTCCA
TGGGATGGGAAAAAATTATGTATAAAAAAAATGTGTTCTGTCTTATATTG
TAATTGCCAAAGGTTAAAATGATAAATGTAAAAAAAAGGAGTGTTTTGAA
AATTTTAAAGGATGGGAAAATCTCCACTCTTTTAATTAATTATGTGGCTA
CTTTCAGCAAATCTTCATAAGTTGTCAATTTCTCCTTTGGTTTGTTCCTC
AAACTTCCAAGCCTCTTTTCTTCAAAGTCAATCTTTTCCCAAGCACTGAA
TGGTACAGGTCTAACATTTCTATTGTCCAGTAACTGCAGGAGTCCCTCTC
GGCCAGGCTTTGGCAATCCTGATGAGGACGCTAGTACTCCTTGTTCAAGG
TCTTCCGATATGCTAGCAACAGTTTCCTCAGCACAGTAAAAATTTGTGGC
AATTATTCCCGTTGGTCCTCTCTTTAACCCCCCACAGACATATAAACCAT
TTTCAACCTGTGAAAAATCTCCTGAAATATTCTTTAAAACCCGACCTCTA
ATATTTGGAACTATACCTTTGTGATTATCAAAGGGCAAACCATTGACTGG
TACTGATTTGTAACCAATGCTTTTTAGCACCATCCCACAATCAAGGTCTT
CAAATTCACCAGTACCCACAGCATACTGTTTCCT
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