CX671785

Overview
NameCX671785
Unique NameCX671785
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length839
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671785 vs. ExPASy Swiss-Prot
Match: ACCO1_ARATH (1-aminocyclopropane-1-carboxylate oxidase OS=Arabidopsis thaliana GN=ACO PE=2 SV=2)

HSP 1 Score: 97.8265 bits (242), Expect = 7.909e-20
Identity = 55/158 (34.81%), Postives = 90/158 (56.96%), Query Frame = -3
Query:  370 FSKYVTKLGQDLFKLLSEALGLNSNHLTNMGCADGHVFY---CHYYPACPEPNLTLGHTKHRDPDFLTILLQN-QIGGLQVLHDNHWVNIPPVEGALVVNVGELLQVISNDKFKAAEHQVLANCAGP-RLSVACFFTTHFEPSEKLFSPIEELLSDDS 828
            F+  + KL ++L  LL E LGL   +L  +        +      YP CP P+L  G   H D   + +L Q+ ++ GLQ+L D  WV++PPV+ ++VVN+G+ L+VI+N K+K+ EH+VL+   G  R+S+A F+      S+ +  P  EL+  ++
Sbjct:  117 FAGKIEKLSEELLDLLCENLGLEKGYLKKVFYGSKRPTFGTKVSNYPPCPNPDLVKGLRAHTDAGGIILLFQDDKVSGLQLLKDGEWVDVPPVKHSIVVNLGDQLEVITNGKYKSVEHRVLSQTDGEGRMSIASFYN---PGSDSVIFPAPELIGKEA 271          
BLAST of CX671785 vs. ExPASy Swiss-Prot
Match: G3OX2_ARATH (Gibberellin 3-beta-dioxygenase 2 OS=Arabidopsis thaliana GN=GA4H PE=1 SV=2)

HSP 1 Score: 97.0561 bits (240), Expect = 1.349e-19
Identity = 52/131 (39.69%), Postives = 73/131 (55.73%), Query Frame = -3
Query:  331 VFYCHYYPACPEPNLTLGHTKHRDPDFLTILLQNQIGGLQVLHDN-HWVNIPPVEGALVVNVGELLQVISNDKFKAAEHQVLANCAGPRLSVACFFTTHFEPSEKLFSPIEELLSDDSPPLYRGTTVKAYI 720
            V   ++YP CPEP+  +G   H D   +TIL QN   GLQV  D+  WV  PPV G+LVVNVG+LL +++N  F +  H+   N    R S+A  +     PS+ + SP+ +L+     PLY   T K Y+
Sbjct:  204 VIQLNHYPKCPEPDRAMGLAAHTDSTLMTILYQNNTAGLQVFRDDVGWVTAPPVPGSLVVNVGDLLHILTNGIFPSVLHRARVNHVRSRFSMAYLWG---PPSDIMISPLPKLVDPLQSPLYPSLTWKQYL 331          
BLAST of CX671785 vs. ExPASy Swiss-Prot
Match: ACCO4_PETHY (1-aminocyclopropane-1-carboxylate oxidase 4 OS=Petunia hybrida GN=ACO4 PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.762e-19
Identity = 54/163 (33.13%), Postives = 91/163 (55.83%), Query Frame = -3
Query:  370 FSKYVTKLGQDLFKLLSEALGLNSNHLT---------NMGCADGHVFYCHYYPACPEPNLTLGHTKHRDPDFLTILLQN-QIGGLQVLHDNHWVNIPPVEGALVVNVGELLQVISNDKFKAAEHQVLANCAGPRLSVACFFTTHFEPSEKLFSPIEELLSDDS 828
            F+K + KL ++L  LL E LGL   +L          N G    +      YP CP+P+L  G   H D   + +L Q+ ++ GLQ+L D+ W+++PP+  ++V+N+G+ L+VI+N K+K+  H+V+A   G R+S+A F+      S+ +  P   L+  D+
Sbjct:  117 FAKRLEKLAEELLDLLCENLGLEKGYLKKAFYGSKGPNFGTKVSN------YPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDDQWIDVPPMRHSIVINLGDQLEVITNGKYKSVPHRVIAQTDGTRMSLASFYN---PASDAVIYPAPALVERDA 270          
BLAST of CX671785 vs. ExPASy Swiss-Prot
Match: ACCO1_PETHY (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Petunia hybrida GN=ACO1 PE=1 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.762e-19
Identity = 50/135 (37.04%), Postives = 81/135 (60.00%), Query Frame = -3
Query:  436 FSKYVTKLGQDLFKLLSEALGLNSNHLTNMGCADGHVFY---CHYYPACPEPNLTLGHTKHRDPDFLTILLQN-QIGGLQVLHDNHWVNIPPVEGALVVNVGELLQVISNDKFKAAEHQVLANCAGPRLSVACFF 828
            F+K + KL ++L  LL E LGL   +L N         +      YP CP+P+L  G   H D   + +L Q+ ++ GLQ+L D  W+++PP+  ++VVN+G+ L+VI+N K+K+  H+V+A   G R+S+A F+
Sbjct:  117 FAKRLEKLAEELLDLLCENLGLEKGYLKNAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPMRHSIVVNLGDQLEVITNGKYKSVMHRVIAQKDGARMSLASFY 251          
BLAST of CX671785 vs. ExPASy Swiss-Prot
Match: GAOX1_ARATH (Gibberellin 20 oxidase 1 OS=Arabidopsis thaliana GN=20ox1 PE=2 SV=2)

HSP 1 Score: 96.2857 bits (238), Expect = 2.301e-19
Identity = 52/169 (30.77%), Postives = 89/169 (52.66%), Query Frame = -3
Query:  325 KFSKYVTKLGQDLFKLLSEALGLNSNHLTNMGCADGHVFYCHYYPACPEPNLTLGHTKHRDPDFLTILLQNQIGGLQVLHDNHWVNIPPVEGALVVNVGELLQVISNDKFKAAEHQVLANCAGPRLSVACFFTTHFEPSEKLFSPIEELLSDDSPPLYRGTTVKAYIDF 831
            ++ + ++ L   + +LL  +LG+  ++       +  +   +YYP C +P+LTLG   H DP  LTIL Q+ + GLQV  +N W +I P   A VVN+G+    +SND++K+  H+ + N    R S+A F        +++ +P  ELL   +   Y   T   +++F
Sbjct:  189 EYCEAMSSLSLKIMELLGLSLGVKRDYFREFFEENDSIMRLNYYPPCIKPDLTLGTGPHCDPTSLTILHQDHVNGLQVFVENQWRSIRPNPKAFVVNIGDTFMALSNDRYKSCLHRAVVNSESERKSLAFFLC---PKKDRVVTPPRELLDSITSRRYPDFTWSMFLEF 354          
BLAST of CX671785 vs. ExPASy Swiss-Prot
Match: ACCO2_SOLLC (1-aminocyclopropane-1-carboxylate oxidase 2 OS=Solanum lycopersicum GN=ACO2 PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.301e-19
Identity = 50/135 (37.04%), Postives = 81/135 (60.00%), Query Frame = -3
Query:  436 FSKYVTKLGQDLFKLLSEALGLNSNHLTNMGCADGHVFY---CHYYPACPEPNLTLGHTKHRDPDFLTILLQN-QIGGLQVLHDNHWVNIPPVEGALVVNVGELLQVISNDKFKAAEHQVLANCAGPRLSVACFF 828
            F K + KL ++L  LL E LGL  ++L N         +      YP CP+P+L  G   H D   + +L Q+ ++ GLQ+L D  W+++PP+  ++VVN+G+ L+VI+N K+K+  H+V+A   G R+S+A F+
Sbjct:  117 FRKRLEKLAEELLDLLCENLGLEKSYLKNTFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGRWIDVPPMRHSIVVNLGDQLEVITNGKYKSVMHRVIAQKDGTRMSLASFY 251          
BLAST of CX671785 vs. ExPASy Swiss-Prot
Match: ACCO1_DORSP (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Doritaenopsis sp. GN=ACO1 PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.301e-19
Identity = 51/138 (36.96%), Postives = 82/138 (59.42%), Query Frame = -3
Query:  436 KFSKYVTKLGQDLFKLLSEALGLNSNHLTNMGC--ADGHVFY---CHYYPACPEPNLTLGHTKHRDPDFLTILLQN-QIGGLQVLHDNHWVNIPPVEGALVVNVGELLQVISNDKFKAAEHQVLANCAGPRLSVACFF 831
            +F+  +  L + L  LL E LGL   +L  + C  +DG   +      YP CP+P L  G   H D   + +L Q+ ++ GLQ+L D  W+++PPV  ++VVN+G+ L+VI+N K+K+  H+V+A   G R+S+A F+
Sbjct:  118 EFALELENLAERLLDLLCEDLGLEKGYLKKVFCGGSDGLPTFGTKVSNYPPCPKPELIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGEWIDVPPVRHSIVVNIGDQLEVITNGKYKSVLHRVVAQTDGNRMSIASFY 255          
BLAST of CX671785 vs. ExPASy Swiss-Prot
Match: ACCO_PRUMU (1-aminocyclopropane-1-carboxylate oxidase OS=Prunus mume GN=ACO1 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 3.925e-19
Identity = 50/136 (36.76%), Postives = 80/136 (58.82%), Query Frame = -3
Query:  436 KFSKYVTKLGQDLFKLLSEALGLNSNHLTNMGCA-DGHVFYCHY--YPACPEPNLTLGHTKHRDPDFLTILLQN-QIGGLQVLHDNHWVNIPPVEGALVVNVGELLQVISNDKFKAAEHQVLANCAGPRLSVACFF 831
            +F+  + KL + L  LL E LGL   +L       +G  F      YP CP P L  G   H D   L +L Q+ ++ GLQ+L D  W+++PP+  ++V+N+G+ L+VI+N K+++ EH+V+A   G R+S+A F+
Sbjct:  116 EFALKLEKLAEQLLDLLCENLGLEKGYLKKAFYGTNGPTFGTKVSNYPPCPNPELIKGLRAHTDAGGLILLFQDDKVSGLQLLKDGQWIDVPPMRHSIVINLGDQLEVITNGKYRSVEHRVIAQTDGTRMSIASFY 251          
BLAST of CX671785 vs. ExPASy Swiss-Prot
Match: FLS_EUSGR (Flavonol synthase/flavanone 3-hydroxylase OS=Eustoma grandiflorum GN=FLS PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 5.126e-19
Identity = 52/168 (30.95%), Postives = 90/168 (53.57%), Query Frame = -3
Query:  334 KFSKYVTKLGQDLFKLLSEALGLNSNHLTNMGCADGHVFYC--HYYPACPEPNLTLGHTKHRDPDFLTILLQNQIGGLQVLHDNHWVNIPPVEGALVVNVGELLQVISNDKFKAAEHQVLANCAGPRLSVACFFTTHFEPSEKLFSPIEELLSDDSPPLYRGTTVKAY 831
            +++K +  +  +LFK LS  L L  N   +    D  V+    +YYP CP P+L LG   H D   +T+L+ N++ GLQV  D HW +   +  AL+V++G+ ++++SN K+K+  H+   N    R+S   F      P +    PI +L+++++P  ++    K Y
Sbjct:  161 EYAKRLQLVVDNLFKYLSLGLDLEPNSFKDGAGGDDLVYLMKINYYPPCPRPDLALG-VAHTDMSAITVLVPNEVPGLQVYKDGHWYDCKYIPNALIVHIGDQVEIMSNGKYKSVYHRTTVNKEKTRMSWPVFLE---PPPDHEVGPIPKLVNEENPAKFKTKKYKDY 324          
BLAST of CX671785 vs. ExPASy Swiss-Prot
Match: ACCO3_PETHY (1-aminocyclopropane-1-carboxylate oxidase 3 OS=Petunia hybrida GN=ACO3 PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 5.126e-19
Identity = 51/141 (36.17%), Postives = 82/141 (58.16%), Query Frame = -3
Query:  436 FSKYVTKLGQDLFKLLSEALGLNSNHLT---------NMGCADGHVFYCHYYPACPEPNLTLGHTKHRDPDFLTILLQN-QIGGLQVLHDNHWVNIPPVEGALVVNVGELLQVISNDKFKAAEHQVLANCAGPRLSVACFF 828
            F+K + KL ++L  LL E LGL   +L          N G    +      YP CP+P+L  G   H D   + +L Q+ ++ GLQ+L D  W+++PP+  ++VVN+G+ L+VI+N K+K+  H+V+A   G R+S+A F+
Sbjct:  117 FAKRLEKLAEELLDLLCENLGLEKGYLKKAFYGSKGPNFGTKVSN------YPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPMRHSIVVNLGDQLEVITNGKYKSVLHRVIAQTDGTRMSLASFY 251          
The following BLAST results are available for this feature:
BLAST of CX671785 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 83
Match NameE-valueIdentityDescription
ACCO1_ARATH7.909e-2034.811-aminocyclopropane-1-carboxylate oxidase OS=Arabi... [more]
G3OX2_ARATH1.349e-1939.69Gibberellin 3-beta-dioxygenase 2 OS=Arabidopsis th... [more]
ACCO4_PETHY1.762e-1933.131-aminocyclopropane-1-carboxylate oxidase 4 OS=Pet... [more]
ACCO1_PETHY1.762e-1937.041-aminocyclopropane-1-carboxylate oxidase 1 OS=Pet... [more]
GAOX1_ARATH2.301e-1930.77Gibberellin 20 oxidase 1 OS=Arabidopsis thaliana G... [more]
ACCO2_SOLLC2.301e-1937.041-aminocyclopropane-1-carboxylate oxidase 2 OS=Sol... [more]
ACCO1_DORSP2.301e-1936.961-aminocyclopropane-1-carboxylate oxidase 1 OS=Dor... [more]
ACCO_PRUMU3.925e-1936.761-aminocyclopropane-1-carboxylate oxidase OS=Prunu... [more]
FLS_EUSGR5.126e-1930.95Flavonol synthase/flavanone 3-hydroxylase OS=Eusto... [more]
ACCO3_PETHY5.126e-1936.171-aminocyclopropane-1-carboxylate oxidase 3 OS=Pet... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS10_13B06_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-13B06-C11-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671785 ID=CX671785; Name=CX671785; organism=Citrus sinensis; type=EST; length=839bp
AAACAGTCCTTTTTATTTCATATAAACAATGGAAATCCAAATACAGACAT
TACATTGACGATGTCAAAATGGTAGAAGGGAAGACCATTTTCCTAAGAAG
AGAGAGATAAAGAGGCTGCCTTAGTGTTCATGTTTTAAATGTGTCCTCCA
ACTGTCTCTTTAGCGTTCATGTTTTAAATGTGTCCTCCAACTGTCGTACA
ATTTCTTTAAATACTGATTTTTTGCAGAGATTTGCATCGGCATGCACACA
CCACCTAGGTAAGTCCACCTTTACAACCTCAAACGAGTGAGTGATGAGTA
AGCTGGAAGTCCGGCTGAAGCAAAGAAGTCAATGTAGGCTTTTACAGTGG
TGCCCCTATACAAAGGAGGACTATCATCTGATAACAACTCCTCTATGGGG
CTAAAAAGCTTCTCGGATGGCTCAAAATGTGTTGTGAAGAAGCATGCCAC
TGACAATCTAGGTCCAGCACAATTAGCCAGCACTTGGTGTTCGGCAGCCT
TGAACTTGTCATTAGAGATAACCTGTAAGAGTTCCCCAACGTTGACTACT
AGAGCTCCTTCCACCGGAGGAATATTAACCCAATGATTATCATGAAGAAC
TTGCAGACCACCAATTTGATTTTGCAGAAGGATAGTGAGAAAATCTGGAT
CACGGTGTTTGGTATGTCCAAGAGTCAGGTTTGGCTCAGGACAGGCCGGA
TAGTAGTGACAGTAAAAGACATGTCCATCAGCACAACCCATGTTCGTTAG
GTGATTAGAGTTGAGGCCAAGTGCCTCCGAAAGTAACTTGAACAAATCCT
GACCTAGTTTTGTAACATATTTCGAAAACTTCAACAGTA
back to top