CX671782
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX671782 vs. ExPASy Swiss-Prot
Match: GLYC_MOUSE (Serine hydroxymethyltransferase, cytosolic OS=Mus musculus GN=Shmt1 PE=1 SV=2) HSP 1 Score: 212.616 bits (540), Expect = 2.435e-54 Identity = 109/201 (54.23%), Postives = 142/201 (70.65%), Query Frame = -1 Query: 301 GKEVFYD*KEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKLAVKIKSE--TQGTKLKDF-VATTQSANFQSEIAKLRHDVEEYAKQFPTIG 894 GKE +Y+ + IN AVFPGLQGGPHNH I G+AVALKQA T E+K YQ QVL+NC + L E+GY++V+GG++NHL+L++L++K DG R EKVLEA IA NKNT PGD SA+ P G+R+GTPALTSRG +EEDF KVA+F ++L ++I+S T+ T LK+F QS +A LR +VE +A F G Sbjct: 275 GKETYYELESLINSAVFPGLQGGPHNHAIAGVAVALKQAMTTEFKIYQLQVLANCRALSDALTELGYKIVTGGSDNHLILMDLRSKGTDGGRAEKVLEACSIACNKNTCPGDKSALRPSGLRLGTPALTSRGLLEEDFQKVAHFIHRGIELTLQIQSHMATKAT-LKEFKEKLAGDEKIQSAVATLREEVENFASNFSLPG 474
BLAST of CX671782 vs. ExPASy Swiss-Prot
Match: GLYM_CANAL (Serine hydroxymethyltransferase, mitochondrial OS=Candida albicans GN=SHM1 PE=3 SV=1) HSP 1 Score: 211.846 bits (538), Expect = 4.153e-54 Identity = 104/199 (52.26%), Postives = 146/199 (73.37%), Query Frame = -1 Query: 301 GKEVFYD*KEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKLAVKIKSETQGTKLKDFVATTQS-ANFQSEIAKLRHDVEEYAKQFPTIG 894 GKE+ Y+ + KIN VFPG QGGPHNHTI+ LAVALKQ T PEY YQ++V+SN FA L+ G++LVS GT+ HL+LV+L+++ IDG+RVE VLE +IAANKNTVPGDVSA+ P G+R+GTPA+T+RGF E+F KVA F D AV +A+++K++ QG K+ +A+ + A+ ++ +L +V + ++P G Sbjct: 293 GKEIPYELERKINFLVFPGHQGGPHNHTISALAVALKQCTEPEYVKYQQEVVSNAKHFADALVSKGFKLVSDGTDTHLILVDLRSRNIDGARVEAVLERANIAANKNTVPGDVSALFPSGLRVGTPAMTTRGFGPEEFDKVAEFIDQAVNIAIELKAQEQGKVPKELLASFKKLADESDKVKQLDKEVVSWVSKYPVPG 491
BLAST of CX671782 vs. ExPASy Swiss-Prot
Match: GLYC_BOVIN (Serine hydroxymethyltransferase, cytosolic OS=Bos taurus GN=SHMT1 PE=2 SV=3) HSP 1 Score: 211.846 bits (538), Expect = 4.153e-54 Identity = 108/201 (53.73%), Postives = 143/201 (71.14%), Query Frame = -1 Query: 301 GKEVFYD*KEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKLAVKIKSETQGTK--LKDFVATTQSA-NFQSEIAKLRHDVEEYAKQFPTIG 894 G+E Y+ + IN AVFPGLQGGPHNH I G+AVALKQA TPE++AYQ QV++NC A+ L+ +GY +V+GG++NHL+LV+L++K DG R EKVLEA IA NKNT PGD SA+ P G+R+GTPALTSRG +EEDF KVA+F ++L ++I+ + G K LK+F+ A +A LR +VE +A FP G Sbjct: 281 GRETRYNLESLINSAVFPGLQGGPHNHAIAGVAVALKQAMTPEFRAYQRQVVANCRALAEALMGLGYRVVTGGSDNHLILVDLRSKGTDGGRAEKVLEACSIACNKNTCPGDKSALRPSGLRLGTPALTSRGLLEEDFQKVAHFIHRGIELTLQIQ-DAVGVKATLKEFMEKLAGAEEHHRAVAALRAEVESFATLFPLPG 480
BLAST of CX671782 vs. ExPASy Swiss-Prot
Match: GLYM_YEAST (Serine hydroxymethyltransferase, mitochondrial OS=Saccharomyces cerevisiae GN=SHM1 PE=1 SV=2) HSP 1 Score: 209.534 bits (532), Expect = 2.061e-53 Identity = 102/201 (50.75%), Postives = 147/201 (73.13%), Query Frame = -1 Query: 301 GKEVFYD*KEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKLAVKIKSETQGTKL---KDFVATTQSANFQSEIAKLRHDVEEYAKQFPTIG 894 GKE+ Y+ ++KIN +VFPG QGGPHNHTI +AVALKQA +PE+K YQ++++ N FAQ L +MGY+LVSGGT+NHL++++L ++DG+RVE +L A++IAANKNT+PGD SA+ P G+R+GTPA+T+RGF E+F++VA + D+AVKLA +K+ TKL + N SE+A L ++ ++ Q+P G Sbjct: 288 GKEIPYELEKKINFSVFPGHQGGPHNHTIGAMAVALKQAMSPEFKEYQQKIVDNSKWFAQELTKMGYKLVSGGTDNHLIVIDLSGTQVDGARVETILSALNIAANKNTIPGDKSALFPSGLRIGTPAMTTRGFGREEFSQVAKYIDSAVKLAENLKTLEPTTKLDARSRLNEFKKLCNESSEVAALSGEISKWVGQYPVPG 488
BLAST of CX671782 vs. ExPASy Swiss-Prot
Match: GLYM_NEUCR (Putative serine hydroxymethyltransferase, mitochondrial OS=Neurospora crassa GN=NCU05805 PE=3 SV=1) HSP 1 Score: 209.534 bits (532), Expect = 2.061e-53 Identity = 111/212 (52.36%), Postives = 144/212 (67.92%), Query Frame = -1 Query: 310 GKEVFYD*KEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLE------MGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKLAVKIK-----------SETQGTKLKDFVATTQSANFQSEIAKLRHDVEEYAKQFP 894 G+E Y+ + IN +VFPG QGGPHNHTI LAVALKQA TPE++AYQ QVL+N + A L E +GY +VSGGT+NHLVL++LK + IDGSRVE+VLE V +AANKNTVPGD SA+ PGG+R+GTPA+T+RGF EEDFA+VA D AV +AV+I +E ++K F+ + EI +LR +VE + +P Sbjct: 309 GEEELYNLETPINASVFPGHQGGPHNHTIAALAVALKQAQTPEFRAYQSQVLANATALAARLGEPKDKNGLGYTIVSGGTDNHLVLIDLKPQGIDGSRVERVLELVGVAANKNTVPGDKSALTPGGLRIGTPAMTTRGFTEEDFARVADIIDRAVTIAVRINKAAKEDAVKKGNEKAANRVKTFMDYLGNGETDPEIVQLRSEVESWVGTYP 520
BLAST of CX671782 vs. ExPASy Swiss-Prot
Match: GLYM_HUMAN (Serine hydroxymethyltransferase, mitochondrial OS=Homo sapiens GN=SHMT2 PE=1 SV=3) HSP 1 Score: 209.534 bits (532), Expect = 2.061e-53 Identity = 107/202 (52.97%), Postives = 141/202 (69.80%), Query Frame = -1 Query: 292 GKEVFYD*KEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKLAVKIKSETQGTKLKDFVA-TTQSANFQSEIAKLRHDVEEYAKQFPTIGFEK 894 G+E+ Y +++IN AVFP LQGGPHNH I +AVALKQA TP ++ Y QVL N A LLE GY LVSGGT+NHLVLV+L+ K +DG+R E+VLE V I ANKNT PGD SA+ PGG+R+G PALTSR F E+DF +V F D V + +++KS+T KL+DF + + + +A LR VE++A+ FP GF++ Sbjct: 304 GREIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQACTPMFREYSLQVLKNARAMADALLERGYSLVSGGTDNHLVLVDLRPKGLDGARAERVLELVSITANKNTCPGDRSAITPGGLRLGAPALTSRQFREDDFRRVVDFIDEGVNIGLEVKSKT--AKLQDFKSFLLKDSETSQRLANLRQRVEQFARAFPMPGFDE 503
BLAST of CX671782 vs. ExPASy Swiss-Prot
Match: GLYC_CAEBR (Serine hydroxymethyltransferase OS=Caenorhabditis briggsae GN=mel-32 PE=3 SV=3) HSP 1 Score: 209.149 bits (531), Expect = 2.692e-53 Identity = 107/199 (53.77%), Postives = 138/199 (69.35%), Query Frame = -1 Query: 301 GKEVFYD*KEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKLAVKIKSETQGTKLKDFVA-TTQSANFQSEIAKLRHDVEEYAKQFPTIG 894 G E YD +EKIN AVFPGLQGGPHNHTI G+AVALKQ + ++ Y EQ+L N A+ L + GY L +GGT+NHL+LV+L+ ++G+R E +L+ HIA NKNT PGDVSA+ PGGIR+GTPALTSRGF E+DF KV F V++A K +E G LKDF A T + F+ E+A+L VEE++ +F G Sbjct: 310 GVETLYDLEEKINSAVFPGLQGGPHNHTIAGIAVALKQCLSEDFVQYGEQILKNAKTLAERLKKHGYSLATGGTDNHLLLVDLRPIGVEGARAEHILDLAHIACNKNTCPGDVSALRPGGIRLGTPALTSRGFKEQDFEKVGDFIHEGVQIAKKYNAEA-GKTLKDFKAFTATNEQFKQEVAELAKRVEEFSGKFEIPG 507
BLAST of CX671782 vs. ExPASy Swiss-Prot
Match: GLYM_KLULA (Serine hydroxymethyltransferase, mitochondrial OS=Kluyveromyces lactis GN=SHM1 PE=3 SV=1) HSP 1 Score: 207.608 bits (527), Expect = 7.832e-53 Identity = 106/204 (51.96%), Postives = 148/204 (72.55%), Query Frame = -1 Query: 301 GKEVFYD*KEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKLAVKIKSETQGTKLKDFVATTQSANFQ------SEIAKLRHDVEEYAKQFPTIG 894 GKEV YD ++IN +VFPG QGGPHNHTI+ LAVALKQA TPE+K YQ V+ N F + L++ G+ELVSGGT+ HL+L+NL N IDG+R+E +LE ++IAANKNT+PGD SA+ P G+R+GTPA+T+RGF ++FA+VA + D AVKLA+ IKS+ + KD A ++ A+F+ ++ +L +V ++ +FP G Sbjct: 296 GKEVLYDLDKRINFSVFPGHQGGPHNHTISALAVALKQAATPEFKEYQAAVVENARIFGEELVKKGFELVSGGTDTHLILINLSNLGIDGARLETLLENINIAANKNTIPGDKSALFPSGLRVGTPAMTTRGFGPQEFAQVAAYIDRAVKLAIGIKSQ-ESPDAKD--ARSKLASFKELCKESDQVKQLADEVYQWVGEFPVPG 496
BLAST of CX671782 vs. ExPASy Swiss-Prot
Match: GLYM_CANGA (Serine hydroxymethyltransferase, mitochondrial OS=Candida glabrata GN=SHM1 PE=3 SV=1) HSP 1 Score: 206.453 bits (524), Expect = 1.745e-52 Identity = 106/204 (51.96%), Postives = 140/204 (68.63%), Query Frame = -1 Query: 301 GKEVFYD*KEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKLAVKIKSETQG------TKLKDFVATTQSANFQSEIAKLRHDVEEYAKQFPTIG 894 GKE + + IN +VFPG QGGPHNHTI+ LAVALKQA TPE+ YQ+QV+SN F LL+ G+ELVSGGT+NHL+L+NL N IDG+R+E +LE ++IAANKNT+PGD SA+ P G+R+GTPA+T+RGF E+DF KVA + D AVKL++ +KS+ +KL F Q + + KL +V + FP G Sbjct: 283 GKETPFTFDKTINFSVFPGHQGGPHNHTISALAVALKQAKTPEFVEYQKQVVSNAKAFGDELLKRGFELVSGGTDNHLLLLNLSNMGIDGARLEAILEKINIAANKNTIPGDKSALFPSGLRVGTPAMTTRGFQEQDFKKVAEYIDNAVKLSIALKSQESADAKDVRSKLNSF---KQLCDQSEPVQKLAEEVSSWVGTFPVPG 483
BLAST of CX671782 vs. ExPASy Swiss-Prot
Match: GLYC_NEUCR (Serine hydroxymethyltransferase, cytosolic OS=Neurospora crassa GN=for PE=3 SV=2) HSP 1 Score: 204.527 bits (519), Expect = 6.630e-52 Identity = 103/197 (52.28%), Postives = 142/197 (72.08%), Query Frame = -1 Query: 310 GKEVFYD*KEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKLAVKIKSE--TQGTKLKDFVATTQSANFQSEIAKLRHDVEEYAKQFP 894 GKE YD ++KIN +VFPG QGGPHNHTIT LAVALKQA +PE+K YQ++V++N + L E+GY+LVS GT++H+VLV+L+ +DG+RVE +LE ++I NKN VPGD SA+ PGG+R+GTPA+TSRGF E DF KVA F D AVKL +I++ + K KDF A +++ I +L+ ++ ++ FP Sbjct: 273 GKETLYDLEDKINFSVFPGHQGGPHNHTITALAVALKQAASPEFKEYQQKVVANAKALEKKLKELGYKLVSDGTDSHMVLVDLRPIGVDGARVEFLLEQINITCNKNAVPGDKSALTPGGLRIGTPAMTSRGFGEADFEKVAVFVDEAVKLCKEIQASLPKEANKQKDFKAKIATSDI-PRINELKQEIAAWSNTFP 468 The following BLAST results are available for this feature:
BLAST of CX671782 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX671782 ID=CX671782; Name=CX671782; organism=Citrus sinensis; type=EST; length=894bpback to top |