CX671782
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX671782 vs. ExPASy Swiss-Prot
Match: GLYA_BART1 (Serine hydroxymethyltransferase OS=Bartonella tribocorum (strain CIP 105476 / IBS 506) GN=glyA PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 8.426e-31 Identity = 74/191 (38.74%), Postives = 108/191 (56.54%), Query Frame = -1 Query: 298 EKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKLAVKIKSETQGTKLKDFVATTQSANFQSEIAKLRHDVEEYAKQFPTIGF 867 +KIN A+FPGLQGGP H I AVA +A P +K+Y V++N A+TL G+ +VSGGT+NHL+LV+L++K + G R E L HI NKN +P D + + GIR+G+PA T+RGF+E++F +VA+ + KS+ N E+A ++ VE+ QFP + Sbjct: 258 KKINSAIFPGLQGGPLMHVIAAKAVAFGEALHPSFKSYSVNVVANAKTLAKTLQSNGFNIVSGGTDNHLLLVDLRSKNLTGKRAELALGRAHITCNKNGIPFDPETPSITSGIRLGSPAATTRGFLEKEFVQVAHLIAEVLDGLRNAKSDED--------------NHAVEMA-VKKKVEDITNQFPLYSY 433
BLAST of CX671782 vs. ExPASy Swiss-Prot
Match: GLYA_BARHE (Serine hydroxymethyltransferase OS=Bartonella henselae GN=glyA PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 8.426e-31 Identity = 70/191 (36.65%), Postives = 108/191 (56.54%), Query Frame = -1 Query: 298 EKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKLAVKIKSETQGTKLKDFVATTQSANFQSEIAKLRHDVEEYAKQFPTIGF 867 +KIN A+FPGLQGGP H I AVA ++A P +K Y V++N A+TL G+++VSGGT+NHL+LV+L++K++ G E L HI NKN++P D+ + + GIR+G+PA T+RGF E +F ++A+ + KS+ + ++ V R VE+ +FP + Sbjct: 258 KKINSAIFPGLQGGPLMHVIAAKAVAFEEALQPVFKDYSANVVANAKTLAKTLQSNGFDIVSGGTDNHLLLVDLRSKKVTGKCAELALGRAHITCNKNSIPFDLETPFITSGIRLGSPAATTRGFAENEFIEIAHMISEILDNLGMAKSDEDNSAVEMVV---------------RKKVEDMTNKFPLYSY 433
BLAST of CX671782 vs. ExPASy Swiss-Prot
Match: GLYA_LEPCP (Serine hydroxymethyltransferase OS=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) GN=glyA PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 1.100e-30 Identity = 66/128 (51.56%), Postives = 88/128 (68.75%), Query Frame = -1 Query: 487 EKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEE 867 ++IN A+FPG+QGGP H I G AVA ++A PE+KAYQEQV+ N + A+TL G +VSG TE+H++LV+L+ K I G E +L HI NKN +P D MV GIR+G+PA+T+RGF EE Sbjct: 248 KQINSAIFPGIQGGPLMHVIAGKAVAFQEALQPEFKAYQEQVVKNATAMAETLTARGLRIVSGRTESHVMLVDLRPKGITGKEAEALLGRAHITCNKNGIPNDPQKPMVTSGIRLGSPAMTTRGFKEE 375
BLAST of CX671782 vs. ExPASy Swiss-Prot
Match: GLYA_DICNV (Serine hydroxymethyltransferase OS=Dichelobacter nodosus (strain VCS1703A) GN=glyA PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 1.100e-30 Identity = 66/135 (48.89%), Postives = 87/135 (64.44%), Query Frame = -1 Query: 469 KEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEEDFAKVA 870 ++K+N A+FPG QGGP H I AVA K+A P ++ YQEQV+ N A+ + GY++VSGGT+NHL+LV+L NK + G L HI NKN+VP D S V GIR+GTPA+T+RGF + KVA Sbjct: 248 EKKLNSAIFPGSQGGPLMHVIAAKAVAFKEALEPSFQKYQEQVVENAKTMAKVFIARGYDIVSGGTQNHLMLVSLINKGLTGKAANDALSRAHITVNKNSVPNDPQSPFVTSGIRIGTPAITTRGFGVNEVKKVA 382
BLAST of CX671782 vs. ExPASy Swiss-Prot
Match: GLYA_CLOPH (Serine hydroxymethyltransferase OS=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) GN=glyA PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 1.100e-30 Identity = 67/153 (43.79%), Postives = 93/153 (60.78%), Query Frame = -1 Query: 415 KEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKLAVKIKSETQ 870 + K+N+++FPG QGGP H I A+ K+A +K Y +++SN A L G+ LVSGGT+NHL+L++L+N I G E +L+ +I NKNTVP D S V GIR+GTPA+T+RGF E+D A VA VK K K + + Sbjct: 247 EHKLNKSIFPGTQGGPLMHVIAAKAICFKEALDDSFKDYAGKIISNAGALANELTARGFNLVSGGTDNHLMLIDLQNMNITGKEAEHILDEANITCNKNTVPNDPASPFVTSGIRLGTPAITTRGFNEKDMAVVAEAISLVVKDVDKNKEQAK 399
BLAST of CX671782 vs. ExPASy Swiss-Prot
Match: GLYA3_BURS3 (Serine hydroxymethyltransferase 3 OS=Burkholderia sp. (strain 383) GN=glyA3 PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 1.100e-30 Identity = 74/188 (39.36%), Postives = 107/188 (56.91%), Query Frame = -1 Query: 310 KEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKLAVKIKSETQGTKLKDFVATTQSANFQSEIAKLRHDVEEYAKQFP 870 ++ IN A+FPG+QGGP H I G AVA K+A +PE+KAYQE+V+ N A+TL++ G +VSG TE+H++LV+L+ K I G E L A HI NKN +P D V G+R+G+PA+T+RGF + +E G + D + + A + I ++R V E K+FP Sbjct: 247 EKPINSAIFPGIQGGPLMHVIAGKAVAFKEALSPEFKAYQEKVVENARVLAETLVKRGLRIVSGRTESHVMLVDLRAKHITGKAAEAALGAAHITVNKNAIPNDPEKPFVTSGVRLGSPAMTTRGFGPAE-------------------AEQVGNLIADVLDNPEDA---ATIERVRAQVAELTKRFP 412
BLAST of CX671782 vs. ExPASy Swiss-Prot
Match: GLYA_XYLFT (Serine hydroxymethyltransferase OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=glyA PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 1.437e-30 Identity = 72/163 (44.17%), Postives = 97/163 (59.51%), Query Frame = -1 Query: 406 EKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFAKVAYFF--------DAAVKLAVKIKSETQGTK 867 +K+ VFPG+QGGP H I AVA K+A P +K YQ+QV+ N A TL+ GY++VSGGTENHL+LV++ + + G E L VHI NKN VP D S V G+R+GTPA+T+RG+ E+D +A++ D V AV+ K Q K Sbjct: 250 KKLQSIVFPGIQGGPLMHVIAAKAVAFKEALEPAFKVYQQQVVKNAKAMAGTLMLRGYKIVSGGTENHLMLVDMIGRDVSGKDAEGALGQVHITVNKNAVPDDPRSPFVTSGLRLGTPAVTTRGYQEQDCVDLAHWIADVLDAPADVTVIAAVREKVAAQCKK 412
BLAST of CX671782 vs. ExPASy Swiss-Prot
Match: GLYA_XYLF2 (Serine hydroxymethyltransferase OS=Xylella fastidiosa (strain M23) GN=glyA PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 1.437e-30 Identity = 72/163 (44.17%), Postives = 97/163 (59.51%), Query Frame = -1 Query: 406 EKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFAKVAYFF--------DAAVKLAVKIKSETQGTK 867 +K+ VFPG+QGGP H I AVA K+A P +K YQ+QV+ N A TL+ GY++VSGGTENHL+LV++ + + G E L VHI NKN VP D S V G+R+GTPA+T+RG+ E+D +A++ D V AV+ K Q K Sbjct: 250 KKLQSIVFPGIQGGPLMHVIAAKAVAFKEALEPAFKVYQQQVVKNAKAMAGTLMLRGYKIVSGGTENHLMLVDMIGRDVSGKDAEGALGQVHITVNKNAVPDDPRSPFVTSGLRLGTPAVTTRGYQEQDCVDLAHWIADVLDAPADVTVIAAVREKVAAQCKK 412
BLAST of CX671782 vs. ExPASy Swiss-Prot
Match: GLYA_SHESR (Serine hydroxymethyltransferase OS=Shewanella sp. (strain MR-7) GN=glyA PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 1.437e-30 Identity = 65/129 (50.39%), Postives = 87/129 (67.44%), Query Frame = -1 Query: 484 EKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEED 867 +K+N AVFPG QGGP H I G AVA K+A PE+KAYQ+QV+ N + LE GY++VSGGT+NHL+LV+L + + G + L + +I NKN+VP D S V G+R+GTPA+T RGF E + Sbjct: 250 KKLNSAVFPGGQGGPLMHVIAGKAVAFKEALEPEFKAYQQQVVKNAKAMVEVFLERGYKIVSGGTDNHLMLVDLIGRDLTGKEADAALGSANITVNKNSVPNDPRSPFVTSGVRIGTPAITRRGFKEAE 378
BLAST of CX671782 vs. ExPASy Swiss-Prot
Match: GLYA_SHESM (Serine hydroxymethyltransferase OS=Shewanella sp. (strain MR-4) GN=glyA PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 1.437e-30 Identity = 65/129 (50.39%), Postives = 87/129 (67.44%), Query Frame = -1 Query: 484 EKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEED 867 +K+N AVFPG QGGP H I G AVA K+A PE+KAYQ+QV+ N + LE GY++VSGGT+NHL+LV+L + + G + L + +I NKN+VP D S V G+R+GTPA+T RGF E + Sbjct: 250 KKLNSAVFPGGQGGPLMHVIAGKAVAFKEALEPEFKAYQQQVVKNAKAMVEVFLERGYKIVSGGTDNHLMLVDLIGRDLTGKEADAALGSANITVNKNSVPNDPRSPFVTSGVRIGTPAITRRGFKEAE 378 The following BLAST results are available for this feature:
BLAST of CX671782 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX671782 ID=CX671782; Name=CX671782; organism=Citrus sinensis; type=EST; length=894bpback to top |