CX671782
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX671782 vs. ExPASy Swiss-Prot
Match: GLYC2_DICDI (Serine hydroxymethyltransferase 2 OS=Dictyostelium discoideum GN=shmt2 PE=3 SV=1) HSP 1 Score: 170.244 bits (430), Expect = 1.386e-41 Identity = 84/188 (44.68%), Postives = 127/188 (67.55%), Query Frame = -1 Query: 313 D*KEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKLAVKIKSETQGTKLKDFVATTQSANFQSEIAKLRHDVEEYAKQF 876 D + +IN AVFP QGGPH +TI G+AVALK+A++P+++ Y +QV N + L + GY LV+ GT+NHLVL +L+ + I GS++EK + HI NKN V GD +A+ PGG+R+G PALTSRG E+DF KV F D VK+++ I+S+ G K+ DF ++ ++ ++R +V+E++ +F Sbjct: 292 DLENRINFAVFPSCQGGPHENTIAGIAVALKEASSPDFQEYTKQVRRNSQTMGEELKKRGYSLVTEGTDNHLVLWDLRPQGITGSKIEKACDEAHITVNKNAVYGDTNAIAPGGVRLGAPALTSRGLKEQDFVKVVDFLDRVVKISLDIQSKV-GKKMPDF---QRAIADNQDLKQIRQEVKEFSTKF 475
BLAST of CX671782 vs. ExPASy Swiss-Prot
Match: GLYA_RALPJ (Serine hydroxymethyltransferase OS=Ralstonia pickettii (strain 12J) GN=glyA PE=3 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 9.618e-35 Identity = 79/191 (41.36%), Postives = 110/191 (57.59%), Query Frame = -1 Query: 301 KEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKLAVKIKSETQGTKLKDFVATTQSANFQSEIAKLRHDVEEYAKQFPTIG 870 ++ IN A+FPG+QGGP H I G AVA K+A +PE+KAYQEQV+ N + A+TL+ G +VSG TE+H++LV+L+ K+I G EKVL HI NKN +P D V G+R+G+PA+T+RGF E + KVA+ + + ++ IA +R V E KQFP G Sbjct: 247 EKAINSAIFPGIQGGPLMHVIAGKAVAFKEALSPEFKAYQEQVVKNAAAMAETLMARGLRIVSGRTESHVMLVDLRAKKITGKEAEKVLGDAHITVNKNAIPNDPEKPFVTSGVRLGSPAMTTRGFKEAEAVKVAHL----------------------IADVLDNPHDEANIAAVRAKVAELTKQFPVYG 415
BLAST of CX671782 vs. ExPASy Swiss-Prot
Match: GLYA_DICT6 (Serine hydroxymethyltransferase OS=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) GN=glyA PE=3 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 9.618e-35 Identity = 81/187 (43.32%), Postives = 114/187 (60.96%), Query Frame = -1 Query: 310 EKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGDVS-AMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKLAVKIKSETQGTKLKDFVATTQSANFQSEIAKLRHDVEEYAKQFP 867 ++I++AVFPG+QGGP H I AVA K+A TPE+K YQ+Q++ N A+ L+ +GY LVSGGT+NHL+LV+L++K I G EK LE I NKN +P D V GIR+GTPALT+RG E++ VA +L ++ S + +K+K+ K++ +VEE KQFP Sbjct: 244 KEIDKAVFPGIQGGPLMHVIAAKAVAFKEAMTPEFKEYQKQIILNAKAMAEELMRLGYRLVSGGTDNHLMLVDLRDKGITGKEAEKALEEAGITVNKNAIPFDPQPPTVTSGIRIGTPALTTRGMKEDEMRYVA-------RLIHEVLSNFKDSKVKE---------------KVKKEVEELCKQFP 408
BLAST of CX671782 vs. ExPASy Swiss-Prot
Match: GLYA_DESDG (Serine hydroxymethyltransferase OS=Desulfovibrio desulfuricans (strain G20) GN=glyA PE=3 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 1.641e-34 Identity = 83/187 (44.39%), Postives = 114/187 (60.96%), Query Frame = -1 Query: 310 EKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKLAVKIKSETQGTKLKDFVATTQSANFQSEIAKLRHDVEEYAKQFP 867 +K+N +FPG+QGGP H I AVA +A PE+ AYQ+QV++N +K A TL + G+ELVSGGT+NHL+LV+L NK I G + L+ I ANKNTVP + S V GIR+GTPALT+RG E + KVA + A+ I +ET+ +A++ DVE++A+QFP Sbjct: 244 KKLNSQIFPGIQGGPLMHVIAAKAVAFGEALRPEFGAYQKQVVANAAKLAATLTDAGFELVSGGTDNHLMLVDLTNKDITGKDAQHALDLAGITANKNTVPFETRSPFVTSGIRLGTPALTTRGMKEAEMVKVAGWIIDALG---NIGNETR-------------------LAEISRDVEKFARQFP 408
BLAST of CX671782 vs. ExPASy Swiss-Prot
Match: GLYA_PELTS (Serine hydroxymethyltransferase OS=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) GN=glyA PE=3 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 1.063e-33 Identity = 70/141 (49.65%), Postives = 97/141 (68.79%), Query Frame = -1 Query: 445 KINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGDVS-AMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 864 KIN+AVFPG+QGGP H I AVA K+A P +K YQ +++SN A LLE G+ELVSGGT+NHL+LV+L++K+I G +++ +AV + NKN VP D + GIR+GTPA+TSRG E+D ++A D A++ Sbjct: 250 KINRAVFPGVQGGPLMHVIAAKAVAFKEAMEPGFKEYQRKIVSNARALADALLERGFELVSGGTDNHLILVDLRSKKITGREAQELFDAVGVTVNKNAVPFDPQPPNIASGIRIGTPAVTSRGLNEDDMVQIAEIMDYAIE 390
BLAST of CX671782 vs. ExPASy Swiss-Prot
Match: GLYA_CALS8 (Serine hydroxymethyltransferase OS=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) GN=glyA PE=3 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 1.063e-33 Identity = 70/132 (53.03%), Postives = 96/132 (72.73%), Query Frame = -1 Query: 469 INQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFAKVA 861 I++++FPG+QGGP H I AVALK+A T E++ YQ Q+L N ++ L+E G+ LVSGGT+NHL+LV+L+NK I G EK L++++I NKN +P D S MV GIR+GTPA+T+RGF EED +VA Sbjct: 251 IDKSIFPGIQGGPLEHVIAAKAVALKEAMTEEFRNYQIQILKNAKALSERLIERGFRLVSGGTDNHLMLVDLRNKGITGKDAEKRLDSLNITCNKNAIPFDTQSPMVTSGIRLGTPAVTTRGFKEEDMIEVA 382
BLAST of CX671782 vs. ExPASy Swiss-Prot
Match: GLYA_ALKOO (Serine hydroxymethyltransferase OS=Alkaliphilus oremlandii (strain OhILAs) GN=glyA PE=3 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 1.389e-33 Identity = 69/132 (52.27%), Postives = 94/132 (71.21%), Query Frame = -1 Query: 469 INQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEEDFAKVA 861 I++A+FPGLQGGP H I AV+ K+A +PE+KAYQEQV+ N +K + L G+ LVSGGT+NHL+L++L+NK I G EK+L+ V + NKNT+P D S V GIR+GTPA+T+RG E+D +A Sbjct: 248 IDKAIFPGLQGGPLMHVIAAKAVSFKEALSPEFKAYQEQVIKNAAKLGEELKSRGFNLVSGGTDNHLLLLDLRNKNITGKDAEKLLDEVGVTVNKNTIPYDPESPFVTSGIRIGTPAVTTRGMKEDDMVTIA 379
BLAST of CX671782 vs. ExPASy Swiss-Prot
Match: GLYA_DICTD (Serine hydroxymethyltransferase OS=Dictyoglomus turgidum (strain Z-1310 / DSM 6724) GN=glyA PE=3 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.814e-33 Identity = 77/187 (41.18%), Postives = 114/187 (60.96%), Query Frame = -1 Query: 310 EKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGDVS-AMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKLAVKIKSETQGTKLKDFVATTQSANFQSEIAKLRHDVEEYAKQFP 867 ++I++AVFPG+QGGP H I AVA K+A +PE+K YQ+Q++ N A+ L+++GY LVSGGT+NHL+LV+L++K I G EK LE I NKN +P D + GIR+GTPALT+RG E++ +A +L ++ S + ++K+ K++ +VEE KQFP Sbjct: 244 KEIDKAVFPGIQGGPLMHVIAAKAVAFKEAMSPEFKEYQKQIVLNAKAMAEELIKLGYRLVSGGTDNHLMLVDLRDKGITGKEAEKALEEAGITVNKNAIPFDPQPPTITSGIRIGTPALTTRGMKEDEMRYIA-------RLIHEVLSNFKDERVKE---------------KVKKEVEELCKQFP 408
BLAST of CX671782 vs. ExPASy Swiss-Prot
Match: GLYA_ALHEH (Serine hydroxymethyltransferase OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=glyA PE=3 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.814e-33 Identity = 70/135 (51.85%), Postives = 94/135 (69.63%), Query Frame = -1 Query: 469 KEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEEDFAKVA 870 ++K+N VFPG QGGP H I G AVA K+A PE+KAYQ+QV++N AQ L+E GY++VSGGT+NHL L++L +K + G + L HI NKNTVP D S V G+R+GTPA+T+RGF EE+ ++A Sbjct: 249 EKKLNSLVFPGTQGGPLMHAIAGKAVAFKEALEPEFKAYQQQVVANARAMAQGLIERGYKVVSGGTDNHLFLIDLVDKGLTGKAADAALGKAHITVNKNTVPNDPQSPFVTSGLRIGTPAITTRGFKEEECRELA 383
BLAST of CX671782 vs. ExPASy Swiss-Prot
Match: GLYA_NATTJ (Serine hydroxymethyltransferase OS=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) GN=glyA PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 3.094e-33 Identity = 67/142 (47.18%), Postives = 99/142 (69.72%), Query Frame = -1 Query: 448 KEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGDVSA-MVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAV 870 K++I++A+FPGLQGGP H I AV+ ++A + E+K YQ+QV+ N S A L +GY+LV+GG++NHL+LV+L+ K + G + E+VL+ VHI NKN VP D V G+R+GTPA+T+RGF E++ +VA D + Sbjct: 243 KKEIDKAMFPGLQGGPLMHVIASKAVSFQEALSSEFKNYQKQVIKNASVLADELNNLGYDLVAGGSDNHLMLVDLQKKGVTGKKAERVLDDVHITVNKNAVPNDPEGPFVTSGLRLGTPAVTTRGFAEDEIKEVAQLLDKVI 384 The following BLAST results are available for this feature:
BLAST of CX671782 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX671782 ID=CX671782; Name=CX671782; organism=Citrus sinensis; type=EST; length=894bpback to top |