CX671782
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX671782 vs. ExPASy Swiss-Prot
Match: GLYA_UNCTG (Serine hydroxymethyltransferase OS=Uncultured termite group 1 bacterium phylotype Rs-D17 GN=glyA PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 5.652e-27 Identity = 64/150 (42.67%), Postives = 94/150 (62.67%), Query Frame = -1 Query: 421 EKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKLAVKIKSE 867 +KIN A+FPG QGGP H I AVA +A PE+K YQ+QVL+N + A+TL E ++VSGGT++H+ LV+L+ + G + LE I NKN +P D+ + GIR+G+PA+T+RG E + K+A +A +K+ I +E Sbjct: 245 KKINSAIFPGEQGGPLMHVIAAKAVAFGEALKPEFKEYQKQVLANAKQLAETLEEGKLKIVSGGTDSHMFLVDLRPLNVKGKNAQDTLEKAGITLNKNGIPYDLEKPTMTSGIRIGSPAVTTRGMKEPEMVKIA---EAIIKVLKNIDNE 391
BLAST of CX671782 vs. ExPASy Swiss-Prot
Match: GLYA_MARMM (Serine hydroxymethyltransferase OS=Maricaulis maris (strain MCS10) GN=glyA PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 5.652e-27 Identity = 61/133 (45.86%), Postives = 85/133 (63.91%), Query Frame = -1 Query: 472 EKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEEDFAKV 867 +K N A+FPGLQGGP H I G AVA +A PE+K Y +V++NC ++ + + GY +VSGGT++HL LV+L+ K + G+ E+ LE I NKN VP D V G+R+G+PA T+RGF +F V Sbjct: 260 KKFNSAIFPGLQGGPLMHVIAGKAVAFGEALQPEFKDYVTRVVANCQALSKAITDGGYAIVSGGTDSHLALVDLRPKGLKGNSAEQALERAFITCNKNGVPFDPEKPTVTSGLRVGSPAATTRGFGVAEFTLV 392
BLAST of CX671782 vs. ExPASy Swiss-Prot
Match: GLYA_FLAPJ (Serine hydroxymethyltransferase OS=Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511) GN=glyA PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 5.652e-27 Identity = 60/139 (43.17%), Postives = 81/139 (58.27%), Query Frame = -1 Query: 448 INQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVP-GDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAV 861 ++ +VFPG QGGP H I AVA +A T E+ Y QV N A ++ Y ++SGGT+NH++L++L+NK I G E L I NKN VP D S V GIR+GTPA+T+RG +EED + F D + Sbjct: 258 LDMSVFPGNQGGPLEHIIAAKAVAFGEALTDEFFRYAMQVQKNAKAMAAAFVKRDYHIISGGTDNHMMLIDLRNKNISGKEAENALVKAEITVNKNMVPFDDKSPFVTSGIRVGTPAITTRGLLEEDMETIVAFIDKVI 396
BLAST of CX671782 vs. ExPASy Swiss-Prot
Match: GLYA_ELUMP (Serine hydroxymethyltransferase OS=Elusimicrobium minutum (strain Pei191) GN=glyA PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 5.652e-27 Identity = 58/136 (42.65%), Postives = 84/136 (61.76%), Query Frame = -1 Query: 457 INQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFD 861 +N +VFPG QGGP H I AV +A PE+K YQ QV+ N + + L ++GY +VSGGT+ H++ V+L +K + G E+ L+ I NKNT+P D + G+R+GTPA+T+RG E + A +A F D Sbjct: 247 VNSSVFPGQQGGPLMHVIAAKAVCFGEALKPEFKEYQTQVVKNAKELSTQLQKLGYRIVSGGTDCHVLCVDLTSKSMTGKAAEEALDKAGITTNKNTIPYDTQKPFITSGVRLGTPAVTTRGMKEAEMAAIASFID 382
BLAST of CX671782 vs. ExPASy Swiss-Prot
Match: GLYA_BRASB (Serine hydroxymethyltransferase OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) GN=glyA PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 5.652e-27 Identity = 60/133 (45.11%), Postives = 85/133 (63.91%), Query Frame = -1 Query: 472 EKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEEDFAKV 867 +K+N A+FPGLQGGP H I AVA +A PE+K Y + ++ N A++L G+++VSGGT+NHL+LV+L+ K + G+ EK L I NKN +P D V G+R+GTPA T+RGF +F +V Sbjct: 261 KKLNSAIFPGLQGGPLMHVIAAKAVAFAEALRPEFKTYAKNIVENAKALAESLRAQGFDIVSGGTDNHLMLVDLRPKGLKGNVSEKALVRAGITCNKNGIPFDPEKPFVTSGLRLGTPAATTRGFGVAEFQQV 393
BLAST of CX671782 vs. ExPASy Swiss-Prot
Match: GLYA3_COLP3 (Serine hydroxymethyltransferase 3 OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=glyA3 PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 5.652e-27 Identity = 66/133 (49.62%), Postives = 85/133 (63.91%), Query Frame = -1 Query: 481 D*KEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEEDF 876 D +KIN AVFPGLQGGP H I AVAL + P + AY +QVLSN A TL + G ++V+ GT+ HL+LV+L+ K + G+ E+ LE I NKN +P D MV GIR+GTPA TSRGF ++F Sbjct: 256 DVAKKINSAVFPGLQGGPLMHVIAAKAVALGEVLEPSFGAYIKQVLSNARVLASTLQQRGCDIVTDGTDTHLMLVDLRPKGLKGNTTEESLERAGITCNKNGIPFDSEKPMVTSGIRLGTPAGTSRGFGNDEF 388
BLAST of CX671782 vs. ExPASy Swiss-Prot
Match: GLYA2_RALEJ (Serine hydroxymethyltransferase 2 OS=Ralstonia eutropha (strain JMP134) GN=glyA2 PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 5.652e-27 Identity = 61/133 (45.86%), Postives = 86/133 (64.66%), Query Frame = -1 Query: 472 EKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFAKV 867 +KIN AVFPGLQGGP H I AVA +A T +++ Y + VL+N + L E G +LV+GGT+NHL+LV+L+ K + G++VE+ LE I NKN +P D + GIR+G PA T+RGF +F ++ Sbjct: 253 KKINSAVFPGLQGGPLMHVIAAKAVAFGEAMTSDFRTYIDNVLANAKALGEVLKEGGVDLVTGGTDNHLLLVDLRPKGLKGTQVEQALERAGITCNKNGIPFDTEKPTITSGIRLGAPAATTRGFGVAEFREI 385
BLAST of CX671782 vs. ExPASy Swiss-Prot
Match: GLYA_PROM3 (Serine hydroxymethyltransferase OS=Prochlorococcus marinus (strain MIT 9303) GN=glyA PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 7.382e-27 Identity = 66/133 (49.62%), Postives = 88/133 (66.17%), Query Frame = -1 Query: 469 KINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEEDFAKVA 864 K ++AVFPG QGGP H I AVAL +A PE+ AY QV++N A + E G +VSGGT+NHLVL++L++ + G + ++ V+I ANKNTVP D S V G+R+GT ALT+RGF EE F +VA Sbjct: 255 KFDKAVFPGSQGGPLEHVIAAKAVALGEALQPEFHAYSCQVVANAQVLAGRIQERGIAVVSGGTDNHLVLLDLRSIGMTGKVADLLVSDVNITANKNTVPFDPESPFVTSGLRLGTAALTTRGFDEEAFREVA 387
BLAST of CX671782 vs. ExPASy Swiss-Prot
Match: GLYA_PROM0 (Serine hydroxymethyltransferase OS=Prochlorococcus marinus (strain MIT 9301) GN=glyA PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 7.382e-27 Identity = 61/133 (45.86%), Postives = 88/133 (66.17%), Query Frame = -1 Query: 472 EKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEEDFAKV 867 +K +++VFPG QGGP H I AVA +A P++ Y +QV+ N A TL+ G ++VSGGT+NH+VL++L++ + G + ++ V+I ANKNTVP D S V G+R+GT ALT+RGF E FA+V Sbjct: 248 KKFDKSVFPGTQGGPLEHIIAAKAVAFGEALQPDFVNYSQQVIKNAKVLASTLINRGIDIVSGGTDNHIVLLDLRSINMTGKIADLLVSEVNITANKNTVPFDPESPFVTSGLRLGTAALTTRGFNENAFAEV 380
BLAST of CX671782 vs. ExPASy Swiss-Prot
Match: GLYA_MYCA5 (Serine hydroxymethyltransferase OS=Mycoplasma arthritidis (strain 158L3-1) GN=glyA PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 7.382e-27 Identity = 70/178 (39.33%), Postives = 102/178 (57.30%), Query Frame = -1 Query: 340 EKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNK-RIDGSRVEKVLEAVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKLAVKIKSETQGTKLKDFVATTQSANFQSEIAKLRH 867 +KI++AVFPG QGGP H I AV+ +A PE+ YQ Q++ NC F QT + G ++SG T+NHL +++K + G + E++L ++I NKNT+P D S MV GIR+G A+TSR F E++F +A D A++ + +ET +K EIAKL H Sbjct: 245 KKIDRAVFPGNQGGPLFHQIAAKAVSFYEALQPEFIEYQRQIILNCKVFCQTFINKGVRVISGMTKNHLFTIDVKTSYNLTGKQAEQILSKMNITVNKNTIPFDTESPMVSSGIRLGVAAMTSRDFKEDEFIILANLIDKALR---EPNNETLHQVIK------------KEIAKLSH 407 The following BLAST results are available for this feature:
BLAST of CX671782 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX671782 ID=CX671782; Name=CX671782; organism=Citrus sinensis; type=EST; length=894bpback to top |