CX671782
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX671782 vs. ExPASy Swiss-Prot
Match: GLYA_CLOB1 (Serine hydroxymethyltransferase OS=Clostridium botulinum (strain ATCC 19397 / Type A) GN=glyA PE=3 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 3.421e-32 Identity = 64/140 (45.71%), Postives = 96/140 (68.57%), Query Frame = -1 Query: 445 INQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 861 +++A+FPG+QGGP HTI AV +A +YK Y +QV+ N + L G+ L+SGGT+NHL+L++L NK I G EK+L++V I NKNT+P + +S + GIR+GTPA+T+RGF EE+ K+AYF + +++ Sbjct: 248 VDKAIFPGIQGGPLMHTIAAKAVCFGEALREDYKEYMQQVVKNTKVLGEELKNYGFRLISGGTDNHLLLIDLTNKNITGKDAEKLLDSVGITVNKNTIPFETLSPFITSGIRIGTPAVTTRGFKEEEMKKIAYFMNYSIE 387
BLAST of CX671782 vs. ExPASy Swiss-Prot
Match: GLYA_CLOAB (Serine hydroxymethyltransferase OS=Clostridium acetobutylicum GN=glyA PE=3 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 3.421e-32 Identity = 67/140 (47.86%), Postives = 97/140 (69.29%), Query Frame = -1 Query: 445 INQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 861 I+++VFPG+QGGP H I G AV +A ++K Y +Q+++N FA L + G+ +VSGGT+NHL+LV+L NK I G E +L++V I ANKNT+P + S + GIRMGTP++T+RGF EE+ KVAYF + ++ Sbjct: 248 IDKSVFPGMQGGPLMHIIAGKAVCFGEALKDDFKDYAQQIVNNAKVFADELTKYGFRIVSGGTDNHLLLVDLTNKNITGKDAEHLLDSVGITANKNTIPFEKKSPFITSGIRMGTPSVTTRGFKEEEMKKVAYFINYVIE 387
BLAST of CX671782 vs. ExPASy Swiss-Prot
Match: GLYA_STRM5 (Serine hydroxymethyltransferase OS=Stenotrophomonas maltophilia (strain R551-3) GN=glyA PE=3 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 4.468e-32 Identity = 67/134 (50.00%), Postives = 90/134 (67.16%), Query Frame = -1 Query: 469 EKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFAKVA 867 +K+ VFPG+QGGP H I G AVA K+A P +KAYQ+QV+ N A TL+ GY++VSGGT+NHL+LV++ K + G E L HI NKN+VP D S V G+R+GTPA+T+RG+VE+D +A Sbjct: 250 KKLQSIVFPGIQGGPLMHVIAGKAVAFKEALEPGFKAYQQQVVKNAQAMANTLIARGYKIVSGGTQNHLMLVDMIGKDVSGKDAEAALGKAHITVNKNSVPNDPRSPFVTSGLRLGTPAVTTRGYVEQDCVDLA 383
BLAST of CX671782 vs. ExPASy Swiss-Prot
Match: GLYA_ORITI (Serine hydroxymethyltransferase OS=Orientia tsutsugamushi (strain Ikeda) GN=glyA PE=3 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 4.468e-32 Identity = 78/188 (41.49%), Postives = 106/188 (56.38%), Query Frame = -1 Query: 310 EKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEEDFAKVA-YFFDAAVKLAVKIKSETQGTKLKDFVATTQSANFQSEIAKLRHDVEEYAKQFP 867 +KIN AVFPG+QGGP H I A+A +A P+YK Y QV+ N A+ L + GY +++GGT+NH++LV+L+ K I G E +L+A I NK +P D S + GIR+GTPA T+RGF E DF V Y D +A+ IKS K +D T + S I + V+E FP Sbjct: 239 KKINSAVFPGMQGGPLMHVIAAKAIAFSEALMPQYKEYINQVMLNAKVLAKLLQDRGYNILTGGTDNHMLLVDLRGKNITGQEAEYLLDAAGITCNKQVMPFDTTSPTITSGIRLGTPACTTRGFKENDFITVGKYIADILDNIAI-IKS---AKKNEDITITEIENSLDSVITHTKQHVQELCNSFP 422
BLAST of CX671782 vs. ExPASy Swiss-Prot
Match: GLYA_ONYPE (Serine hydroxymethyltransferase OS=Onion yellows phytoplasma GN=glyA PE=3 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 4.468e-32 Identity = 71/151 (47.02%), Postives = 100/151 (66.23%), Query Frame = -1 Query: 448 KEVFYD*KEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNK--RIDGSRVEKVLEAVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAV 891 +EVF +KIN+ +FPG+QGGP HTI AVA ++A P +K YQ+QV+ N + FA+ + GY +VSGGT+NHL L+++K+K GS++ +LE ++I NKNT+P D V GIR+GTPA+T+ GF E DF VA D A+ Sbjct: 245 EEVF----KKINRGIFPGIQGGPCIHTIAAKAVAFQEAMMPSFKEYQKQVIKNANTFAKAFQQKGYRIVSGGTDNHLFLIDVKHKNPEFTGSKIANMLEKINIVVNKNTIPFDQEKPFVTSGIRIGTPAMTTVGFRENDFILVADLMDKAI 391
BLAST of CX671782 vs. ExPASy Swiss-Prot
Match: GLYA_CLOB8 (Serine hydroxymethyltransferase OS=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) GN=glyA PE=3 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 4.468e-32 Identity = 65/140 (46.43%), Postives = 94/140 (67.14%), Query Frame = -1 Query: 445 INQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 861 +N+ +FPG+QGGP H I AV K+A P +K Y E V+ NC + A+ L+ G+++VSGGT+NH+ LV+L NK I G E +L++V I NKNTVP + S V GIR+GT A+T+RGFV++D A++A A++ Sbjct: 248 LNKNIFPGIQGGPLEHIIAAKAVCFKEALDPSFKTYGENVVENCKELAEQLIARGFKIVSGGTDNHVFLVDLNNKDITGKEAEALLDSVGITVNKNTVPNETRSPFVTSGIRIGTAAITTRGFVKDDMAEIAAVISEAIE 387
BLAST of CX671782 vs. ExPASy Swiss-Prot
Match: GLYA_RALEH (Serine hydroxymethyltransferase OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=glyA PE=3 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 5.835e-32 Identity = 75/191 (39.27%), Postives = 106/191 (55.50%), Query Frame = -1 Query: 301 KEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKLAVKIKSETQGTKLKDFVATTQSANFQSEIAKLRHDVEEYAKQFPTIG 870 ++ IN A+FPG+QGGP H I G AVA K+A TPE+K YQ+QV+ N + A+TL+ G +VSG TE+H++LV+L+ K I G E++L HI NKN +P D V GIR+G+PA+T+RGF EE+ + G + D + A + IA +R K+FP G Sbjct: 247 EKAINSAIFPGIQGGPLMHVIAGKAVAFKEALTPEFKEYQQQVVKNAAVLAETLIARGLRIVSGRTESHVMLVDLRAKNITGKEAERILGEAHITVNKNAIPNDPEKPFVTSGIRLGSPAMTTRGFKEEE-------------------ARIVGNLIADVLDNPHDA---ANIASVREQAAALTKRFPVYG 415
BLAST of CX671782 vs. ExPASy Swiss-Prot
Match: GLYA_CLOD6 (Serine hydroxymethyltransferase OS=Clostridium difficile (strain 630) GN=glyA PE=3 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 5.835e-32 Identity = 69/149 (46.31%), Postives = 98/149 (65.77%), Query Frame = -1 Query: 418 INQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGDVS-AMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKLAVKIKSET 861 I++A+FPG+QGGP H I AV K+A + E+K YQ QV N A+ L++ ++L+SGGT+NHL+L++L NK I G EK L+ +I ANKNT+P D + A+V GIR+GTPA+T+RG EED A +A D + + K+ T Sbjct: 247 IDKAIFPGIQGGPLEHIIASKAVCFKEALSDEFKEYQVQVAKNAKALAEELIKRDFKLISGGTDNHLILLDLTNKNITGKAAEKRLDDAYITANKNTIPFDPNGALVTSGIRLGTPAVTTRGMKEEDMAIIAEAIDLCLTYDEESKART 395
BLAST of CX671782 vs. ExPASy Swiss-Prot
Match: GLYA_ORITB (Serine hydroxymethyltransferase OS=Orientia tsutsugamushi (strain Boryong) GN=glyA PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 7.621e-32 Identity = 77/188 (40.96%), Postives = 107/188 (56.91%), Query Frame = -1 Query: 310 EKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEEDFAKVA-YFFDAAVKLAVKIKSETQGTKLKDFVATTQSANFQSEIAKLRHDVEEYAKQFP 867 +KIN AVFPG+QGGP H I A+A +A P+YK Y QV+ N A+ L + GY +++GGT+NH++LV+L+ K I G E +L+A I NK +P D S + GIR+GTPA T+RGF E +F V Y D +A+ IKS K + T + S I + +H V+E FP Sbjct: 239 KKINSAVFPGMQGGPLMHVIAAKAIAFSEALMPQYKEYINQVMLNAKVLAKLLQDRGYNILTGGTDNHMLLVDLRGKNITGQEAEYLLDAAGITCNKQVMPFDTTSPTITSGIRLGTPACTTRGFKENEFITVGKYIADILDNIAI-IKS---AKKNEGITITEIEKSLNSVITRTKHHVQELCNCFP 422
BLAST of CX671782 vs. ExPASy Swiss-Prot
Match: GLYA_COXBU (Serine hydroxymethyltransferase OS=Coxiella burnetii GN=glyA PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 7.621e-32 Identity = 66/137 (48.18%), Postives = 93/137 (67.88%), Query Frame = -1 Query: 463 KEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFAKVAYF 870 ++++N AVFPG QGGP H I AVA K+A PE+K Y +Q+L N A+ + E GY +VSGGT+NHL LV+L +K I G E L +I NKNTVPG+ S V G+R+GTPA+T+RGF E++ +++A++ Sbjct: 248 EKRLNSAVFPGSQGGPLMHIIAAKAVAFKEAMQPEFKTYAQQILKNAKAMAEVMKERGYTIVSGGTQNHLFLVSLLDKNISGKEAEAALGRANITVNKNTVPGETRSPFVTSGLRIGTPAITTRGFKEKEASQLAHW 384 The following BLAST results are available for this feature:
BLAST of CX671782 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX671782 ID=CX671782; Name=CX671782; organism=Citrus sinensis; type=EST; length=894bpback to top |