CX671780
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX671780 vs. ExPASy Swiss-Prot
Match: COBL6_ARATH (COBRA-like protein 6 OS=Arabidopsis thaliana GN=COBL6 PE=2 SV=2) HSP 1 Score: 215.698 bits (548), Expect = 2.813e-55 Identity = 94/145 (64.83%), Postives = 113/145 (77.93%), Query Frame = -1 Query: 452 MVQCPSHMCPIRVHWHVKLNYREYWRVKITITNFNYAMNYSLWNLVVQHPNFDNLTQLFSFYYKSLTPYE-GLNDTAMLWGIKFYNDFLSEAGSNGNVQSELLFRKDASTFTFEKGWAFPRRIYFNGDNCVMPPPDAYPWLPNAS 883 +V+C HMCPIR+HWHVK+NYREYWRVKIT TNFN NY+ WNLVV HPN ++ Q+FSF YKSLTPY+ +NDT M WG++FYND L + G GNVQ+ELL +KD FTF +GWAFPRRI FNGD CVMP PD +P LP ++ Sbjct: 282 VVKCSDHMCPIRIHWHVKVNYREYWRVKITATNFNTMKNYTNWNLVVLHPNLKSVQQVFSFNYKSLTPYQNSINDTGMFWGVQFYNDVLLQEGKIGNVQTELLLKKDMGNFTFREGWAFPRRILFNGDECVMPSPDDFPRLPKSA 426
BLAST of CX671780 vs. ExPASy Swiss-Prot
Match: COBL7_ORYSJ (COBRA-like protein 7 OS=Oryza sativa subsp. japonica GN=BC1LP1 PE=3 SV=2) HSP 1 Score: 210.305 bits (534), Expect = 1.182e-53 Identity = 90/140 (64.29%), Postives = 110/140 (78.57%), Query Frame = -1 Query: 458 QCPSHMCPIRVHWHVKLNYREYWRVKITITNFNYAMNYSLWNLVVQHPNFDNLTQLFSFYYKSLTPYEGLNDTAMLWGIKFYNDFLSEAGSNGNVQSELLFRKDASTFTFEKGWAFPRRIYFNGDNCVMPPPDAYPWLPN 877 +C HMCP+RVHWHVK++YREYWRVK+TITN+N NYS WNLVVQHPN +LTQLFSF Y+ L Y LNDT M WGI++YN+ + + +GNVQ+E++ +KD S FTF GWAFPRR+YF+G CVMPPPD YP LPN Sbjct: 276 RCTDHMCPVRVHWHVKISYREYWRVKVTITNYNQVKNYSDWNLVVQHPNLRSLTQLFSFNYQPLIEYGTLNDTGMFWGIQYYNEMMLQ---DGNVQTEMILKKDKSDFTFSGGWAFPRRVYFDGHECVMPPPDQYPLLPN 412
BLAST of CX671780 vs. ExPASy Swiss-Prot
Match: COBL4_ORYSJ (COBRA-like protein 4 OS=Oryza sativa subsp. japonica GN=BC1L9 PE=2 SV=1) HSP 1 Score: 172.17 bits (435), Expect = 3.566e-42 Identity = 80/141 (56.74%), Postives = 105/141 (74.47%), Query Frame = -1 Query: 470 MVQCPSHMCPIRVHWHVKLNYREYWRVKITITNFNYAMNYSLWNLVVQHPNFDNLTQLFSFYYKSLTPYEGLNDTAMLWGIKFYNDFLSEAGSNGNVQSELLFRKD---ASTFTFEKGWAFPRRIYFNGDNCVMPPPDAYP 883 ++QC SHMCP++++WH+ L +E++RVKIT+TN NY MN++ WNLVVQ+ ++TQ+ F YKS+ + +NDT MLWG+K Y D L +AG GNVQ EL+ RKD +ST KG AFP R+YFNGDNCVMPPPDAYP Sbjct: 281 LLQCTSHMCPVKINWHLMLKDKEHYRVKITVTNLNYRMNFTEWNLVVQYHPILDITQISGFNYKSIQVGK-INDTTMLWGVKPYYDLLMQAGPLGNVQGELIVRKDFRASSTTNNNKGRAFPVRVYFNGDNCVMPPPDAYP 420 The following BLAST results are available for this feature:
BLAST of CX671780 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 13
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Sequences
The
following sequences are available for this feature:
EST sequence >CX671780 ID=CX671780; Name=CX671780; organism=Citrus sinensis; type=EST; length=883bpback to top |