CX671778

Overview
NameCX671778
Unique NameCX671778
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length860
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671778 vs. ExPASy Swiss-Prot
Match: Y1534_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53420 OS=Arabidopsis thaliana GN=At1g53420 PE=2 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 2.812e-12
Identity = 36/107 (33.64%), Postives = 60/107 (56.07%), Query Frame = -2
Query:  290 NKLIGHIPPQIGNLTRIQTLNLSHNNLTGSIPSTFSNLKHVESLDLSNNKLNGKIPHQLVELKTLEVFSVAYNNLSGEIPEWKAQFATFNESSYEGNTFLCGLPLPI 610
            N+L G IP + GN+T + +L L  N L+G +P    NL +++ + LS+N  NG+IP    +L TL  F V+ N LSG IP++  ++        + +  +  +P+ I
Sbjct:  120 NRLTGPIPKEFGNITTLTSLVLEANQLSGELPLELGNLPNIQQMILSSNNFNGEIPSTFAKLTTLRDFRVSDNQLSGTIPDFIQKWTKLERLFIQASGLVGPIPIAI 226          
BLAST of CX671778 vs. ExPASy Swiss-Prot
Match: Y5343_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53430 OS=Arabidopsis thaliana GN=At1g53430 PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.673e-12
Identity = 36/104 (34.62%), Postives = 56/104 (53.85%), Query Frame = -2
Query:  299 NKLIGHIPPQIGNLTRIQTLNLSHNNLTGSIPSTFSNLKHVESLDLSNNKLNGKIPHQLVELKTLEVFSVAYNNLSGEIPEWKAQFATFNESSYEGNTFLCGLP 610
            N+L G  PPQ+G++T +  +NL  N  TG +P    NL+ ++ L LS N   G+IP  L  LK L  F +  N+LSG+IP++   +        +G +    +P
Sbjct:  147 NRLSGPFPPQLGDITTLTDVNLETNLFTGPLPRNLGNLRSLKELLLSANNFTGQIPESLSNLKNLTEFRIDGNSLSGKIPDFIGNWTLLERLDLQGTSMEGPIP 250          
BLAST of CX671778 vs. ExPASy Swiss-Prot
Match: Y4265_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g26540 OS=Arabidopsis thaliana GN=At4g26540 PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.673e-12
Identity = 36/92 (39.13%), Postives = 54/92 (58.70%), Query Frame = -2
Query:  368 LSLLSGLDLSCNKLIGHIPPQIGNLTRIQTLNLSHNNLTGSIPSTFSNLKHVESLDLSNNKLNGKIPHQLVELKTLEVFSVAYNNLSGEIPE 643
            L  L  L LS N++ G IP ++ N T++  L + +N +TG IPS  SNL+ +       NKL G IP  L + + L+   ++YN+LSG IP+
Sbjct:  333 LENLQELQLSVNQISGTIPEELTNCTKLTHLEIDNNLITGEIPSLMSNLRSLTMFFAWQNKLTGNIPQSLSQCRELQAIDLSYNSLSGSIPK 424          

HSP 2 Score: 71.2478 bits (173), Expect = 8.182e-12
Identity = 38/87 (43.68%), Postives = 52/87 (59.77%), Query Frame = -2
Query:  374 LSGLDLSCNKLIGHIPPQIGNLTRIQTLNLSHNNLTGSIPSTFSNLKHVESLDLSNNKLNGKIPHQLVELKTLEVFSVAYNNLSGEI 634
            L+ L L  N L G IPP IGN T +  L L+ N L GSIPS   NLK++  +D+S N+L G IP  +   ++LE   +  N+LSG +
Sbjct:  432 LTKLLLLSNDLSGFIPPDIGNCTNLYRLRLNGNRLAGSIPSEIGNLKNLNFVDISENRLVGSIPPAISGCESLEFLDLHTNSLSGSL 518          

HSP 3 Score: 68.5514 bits (166), Expect = 5.304e-11
Identity = 42/113 (37.17%), Postives = 58/113 (51.33%), Query Frame = -2
Query:  305 LSLLSGLDLSCNKLIGHIPPQIGNLTRIQTLNLSHNNLTGSIPSTFSNLKHVESLDLSNNKLNGKIPHQLVELKTLEVFSVAYNNLSGEIPEWKAQFATFNESSYEGNTFLCG 643
            L  L+ L LS   L G IP +IG+ T ++ L+LS N+L+G IP     LK +++L L+ N L G IP ++  L  L    +  N LSGEIP    +          GN  L G
Sbjct:   92 LKSLTSLTLSSLNLTGVIPKEIGDFTELELLDLSDNSLSGDIPVEIFRLKKLKTLSLNTNNLEGHIPMEIGNLSGLVELMLFDNKLSGEIPRSIGELKNLQVLRAGGNKNLRG 204          

HSP 4 Score: 68.1662 bits (165), Expect = 6.927e-11
Identity = 37/108 (34.26%), Postives = 58/108 (53.70%), Query Frame = -2
Query:  371 YIYQGKV----------LSLLSGLDLSCNKLIGHIPPQIGNLTRIQTLNLSHNNLTGSIPSTFSNLKHVESLDLSNNKLNGKIPHQLVELKTLEVFSVAYNNLSGEIP 664
            Y+YQ  +          L  L  L L  N L+G IP ++GN   +  ++ S N LTG+IP +F  L++++ L LS N+++G IP +L     L    +  N ++GEIP
Sbjct:  268 YLYQNSISGSIPTTIGGLKKLQSLLLWQNNLVGKIPTELGNCPELWLIDFSENLLTGTIPRSFGKLENLQELQLSVNQISGTIPEELTNCTKLTHLEIDNNLITGEIP 375          

HSP 5 Score: 67.781 bits (164), Expect = 9.047e-11
Identity = 55/181 (30.39%), Postives = 87/181 (48.07%), Query Frame = -2
Query:  371 LDLSNNNLHGPIPPCFDN-----------TTLHESYSNSSSPDEQFEIFFSIEGHQGFLEKQNHEIFEFTTKNIAYI-YQGKVLSLLSG------LDLSCNKLIGHIPPQIGNLTRIQ-TLNLSHNNLTGSIPSTFSNLKHVESLDLSNNKLNGKIPHQLVELKTLEVFSVAYNNLSGEIP 856
            +D+S N L G IPP                +L  S   ++ P     I FS       L      + E T  N+A     G++   +S       L+L  N   G IP ++G +  +  +LNLS N   G IPS FS+LK++  LD+S+N+L G + + L +L+ L   +++YN+ SG++P
Sbjct:  483 VDISENRLVGSIPPAISGCESLEFLDLHTNSLSGSLLGTTLPKSLKFIDFSDNALSSTLPPGIGLLTELTKLNLAKNRLSGEIPREISTCRSLQLLNLGENDFSGEIPDELGQIPSLAISLNLSCNRFVGEIPSRFSDLKNLGVLDVSHNQLTGNL-NVLTDLQNLVSLNISYNDFSGDLP 662          
BLAST of CX671778 vs. ExPASy Swiss-Prot
Match: Y4372_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g37250 OS=Arabidopsis thaliana GN=At4g37250 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.797e-12
Identity = 37/109 (33.94%), Postives = 64/109 (58.72%), Query Frame = -2
Query:  299 LDLSCNKLIGHIPPQIGNLTRIQTLNLSHNNLTGSIPSTFSNLKHVESLDLSNNKLNGKIPHQLVELKTLEVFSVAYNNLSGEIPEWKAQFATFNESSYEGNTFLCGLP 625
            L L  ++L+G IP  +G+L  +Q+L+LS+N+  G +P +F N + +  LDLS+N ++G+IP  + +L  L   +++ N L+G++P   A        S E N F   +P
Sbjct:   71 LSLPNSQLLGSIPSDLGSLLTLQSLDLSNNSFNGPLPVSFFNARELRFLDLSSNMISGEIPSAIGDLHNLLTLNLSDNALAGKLPTNLASLRNLTVVSLENNYFSGEIP 179          

HSP 2 Score: 69.3218 bits (168), Expect = 3.109e-11
Identity = 40/94 (42.55%), Postives = 57/94 (60.64%), Query Frame = -2
Query:  371 GKVLSLLSGLDLSCNKLIGHIPPQIGNLTRIQTLNLSHNNLTGSIPSTFSNLKHVESLDLSNNKLNGKIPHQLVELKTLEVFSVAYNNLSGEIP 652
            G +L+L S LDLS N   G +P    N   ++ L+LS N ++G IPS   +L ++ +L+LS+N L GK+P  L  L+ L V S+  N  SGEIP
Sbjct:   87 GSLLTLQS-LDLSNNSFNGPLPVSFFNARELRFLDLSSNMISGEIPSAIGDLHNLLTLNLSDNALAGKLPTNLASLRNLTVVSLENNYFSGEIP 179          
BLAST of CX671778 vs. ExPASy Swiss-Prot
Match: SERK5_ARATH (Somatic embryogenesis receptor kinase 5 OS=Arabidopsis thaliana GN=SERK5 PE=1 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 4.797e-12
Identity = 44/120 (36.67%), Postives = 65/120 (54.17%), Query Frame = -2
Query:  275 LSGLDLSCNKLIGHIPPQIGNLTRIQTLNLSHNNLTGSIPSTFSNLKHVESLDLSNNKLNGKIPHQLVELKTLEVFSVAYNNLSGEIPEWKAQFATFNESSYEGNTFLCGLPLPICRSPA 634
            L  L+L  N + G IP ++G+L  + +L+L  NN++G IPS+   L  +  L L NN L+G+IP  L  L  L+V  ++ N LSG+IP     F+ F   S+  N      P P   SP+
Sbjct:   96 LQYLELFNNNITGEIPEELGDLMELVSLDLFANNISGPIPSSLGKLGKLRFLRLYNNSLSGEIPRSLTAL-PLDVLDISNNRLSGDIPV-NGSFSQFTSMSFANNKL---RPRPASPSPS 210          
BLAST of CX671778 vs. ExPASy Swiss-Prot
Match: Y5614_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g56140 OS=Arabidopsis thaliana GN=At1g56140 PE=1 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 8.182e-12
Identity = 40/95 (42.11%), Postives = 57/95 (60.00%), Query Frame = -2
Query:  365 KVLSLLSGLDLSCNKLIGHIPPQIGNLTRIQTLNLSHNNLTGSIPSTFSNLKHVESLDLSNNKLNGKIPHQLVELKTLEVFSVAYNNLSGEIPEW 649
            K +  LS L L  N L G IP  IG  + ++ L+LS N L G+IP++  NL+ +  L L NN LNG +P Q  + ++L    V+YN+LSG +P W
Sbjct:  287 KDMKSLSILVLRNNNLTGTIPSNIGEYSSLRQLDLSFNKLHGTIPASLFNLRQLTHLFLGNNTLNGSLPTQ--KGQSLSNVDVSYNDLSGSLPSW 379          
BLAST of CX671778 vs. ExPASy Swiss-Prot
Match: MEE39_ARATH (Probable LRR receptor-like serine/threonine-protein kinase MEE39 OS=Arabidopsis thaliana GN=MEE39 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 8.182e-12
Identity = 40/84 (47.62%), Postives = 54/84 (64.29%), Query Frame = -2
Query:  368 LSCNKLIGHIPPQIGNLTRIQTLNLSHNNLTGSIPSTFSNLKHVESLDLSNNKLNGKIPHQLVELKTLEVFSVAYNNLSGEIPE 619
            L+CN      PP      RI +LNLS + L+G+I S F NL H+ESLDLSNN L+G +P  L  +K+L V +++ N LSG IP+
Sbjct:  401 LNCNITDISAPP------RIISLNLSSSGLSGTIVSNFQNLAHLESLDLSNNSLSGIVPEFLATMKSLLVINLSGNKLSGAIPQ 478          
BLAST of CX671778 vs. ExPASy Swiss-Prot
Match: PGIP1_ORYSJ (Polygalacturonase inhibitor 1 OS=Oryza sativa subsp. japonica GN=FOR1 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.069e-11
Identity = 40/96 (41.67%), Postives = 61/96 (63.54%), Query Frame = -2
Query:  356 LSLLSGLDLSCNKLIGHIPPQIGNLTRIQTLNLSHNNLTGSIPSTFSNLKHVESLDLSNNKLNGKIPHQLVELKTLEVFSVAYNNLSGEIPEWKAQ 643
            LS L  L +S   + G IP  +  +  + +++LSHN+LTG IP++FS+L ++ SLDL +NKL G IP  LV+ +   +  ++YN L+G IP   AQ
Sbjct:  119 LSNLQFLTISHTNVSGVIPDSLARIRSLDSVDLSHNSLTGPIPNSFSDLPNLRSLDLRSNKLTGCIPAGLVQGQFRSLI-LSYNQLTGPIPRDDAQ 213          
BLAST of CX671778 vs. ExPASy Swiss-Prot
Match: IKU2_ARATH (Receptor-like protein kinase HAIKU2 OS=Arabidopsis thaliana GN=IKU2 PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.396e-11
Identity = 36/94 (38.30%), Postives = 62/94 (65.96%), Query Frame = -2
Query:  371 KVLSLLSGLDLSCNKLIGH-IPPQIGNLTRIQTLNLSHNNLTGSIPSTFSNLKHVESLDLSNNKLNGKIPHQLVELKTLEVFSVAYNNLSGEIP 649
            K L  LS L +  N+   H  P +I NLT +Q + LS++++TG IP    NL  +++L+LS+N+++G+IP ++V+LK L    +  N+L+G++P
Sbjct:  169 KDLKRLSFLSVGDNRFGSHPFPREILNLTALQWVYLSNSSITGKIPEGIKNLVRLQNLELSDNQISGEIPKEIVQLKNLRQLEIYSNDLTGKLP 262          

HSP 2 Score: 69.3218 bits (168), Expect = 3.109e-11
Identity = 45/131 (34.35%), Postives = 64/131 (48.85%), Query Frame = -2
Query:  242 LSGLDLSCNKLIGHIPPQIGNLTRIQTLNLSHNNLTGSIPSTFSNLKHVESLDLSNNKLNGKIPHQLVELKTLEVFSVAYNNLSGEIPEWKAQFATFNESSYEGNTFLCGLPLPICRSPATMPEASIGNEQ 634
            L  LDLS N+  G +P QI     + ++NL  N  +G +P +F  LK + SL L  N L+G IP  L    +L   + A N+LS EIPE        N  +  GN  L G+ +P+  S   +    + N Q
Sbjct:  438 LGSLDLSNNRFSGSLPFQISGANSLVSVNLRMNKFSGIVPESFGKLKELSSLILDQNNLSGAIPKSLGLCTSLVDLNFAGNSLSEEIPESLGSLKLLNSLNLSGNK-LSGM-IPVGLSALKLSLLDLSNNQ 566          
BLAST of CX671778 vs. ExPASy Swiss-Prot
Match: Y5332_ARATH (Probable inactive receptor kinase At5g53320 OS=Arabidopsis thaliana GN=At5g53320 PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.823e-11
Identity = 37/92 (40.22%), Postives = 52/92 (56.52%), Query Frame = -2
Query:  368 LSLLSGLDLSCNKLIGHIPPQIGNLTRIQTLNLSHNNLTGSIPSTFSNLKHVESLDLSNNKLNGKIPHQLVELKTLEVFSVAYNNLSGEIPE 643
            LS L  L LS N + G  P  +  L  +  L L  N  +G +PS  S+ + ++ LDLSNN+ NG IP  + +L  L   ++AYN  SGEIP+
Sbjct:   89 LSNLRFLILSSNNISGTFPTTLQALKNLTELKLDFNEFSGPLPSDLSSWERLQVLDLSNNRFNGSIPSSIGKLTLLHSLNLAYNKFSGEIPD 180          

HSP 2 Score: 68.9366 bits (167), Expect = 4.061e-11
Identity = 39/113 (34.51%), Postives = 66/113 (58.41%), Query Frame = -2
Query:  311 KVLSLLSGLDLSCNKLIGHIPPQIGNLTRIQTLNLSHNNLTGSIPSTFSNLKHVESLDLSNNKLNGKIPHQLVELKTLEVFSVAYNNLSGEIPEWKAQFATFNESSYEGNTFL 649
            + L  L+ L L  N+  G +P  + +  R+Q L+LS+N   GSIPS+   L  + SL+L+ NK +G+IP   + +  L++ ++A+NNL+G +P+       F  S++ GN  L
Sbjct:  111 QALKNLTELKLDFNEFSGPLPSDLSSWERLQVLDLSNNRFNGSIPSSIGKLTLLHSLNLAYNKFSGEIPD--LHIPGLKLLNLAHNNLTGTVPQ---SLQRFPLSAFVGNKVL 218          
The following BLAST results are available for this feature:
BLAST of CX671778 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 92
Match NameE-valueIdentityDescription
Y1534_ARATH2.812e-1233.64Probable LRR receptor-like serine/threonine-protei... [more]
Y5343_ARATH3.673e-1234.62Probable LRR receptor-like serine/threonine-protei... [more]
Y4265_ARATH3.673e-1239.13Probable LRR receptor-like serine/threonine-protei... [more]
Y4372_ARATH4.797e-1233.94Probable LRR receptor-like serine/threonine-protei... [more]
SERK5_ARATH4.797e-1236.67Somatic embryogenesis receptor kinase 5 OS=Arabido... [more]
Y5614_ARATH8.182e-1242.11Probable LRR receptor-like serine/threonine-protei... [more]
MEE39_ARATH8.182e-1247.62Probable LRR receptor-like serine/threonine-protei... [more]
PGIP1_ORYSJ1.069e-1141.67Polygalacturonase inhibitor 1 OS=Oryza sativa subs... [more]
IKU2_ARATH1.396e-1138.30Receptor-like protein kinase HAIKU2 OS=Arabidopsis... [more]
Y5332_ARATH1.823e-1140.22Probable inactive receptor kinase At5g53320 OS=Ara... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_13B03_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-13B03-C5-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671778 ID=CX671778; Name=CX671778; organism=Citrus sinensis; type=EST; length=860bp
TTTTTTAGAACTTAAAGAATCGTAATTAAACTGCTAATTAATTTCAATGA
CAATATCTTGTTGCAATAAGATTGTTTACAACAAAATAGTAACATTAAGT
TATCCACATTTCAACAAAGTAAAACCATCTACGTCGCCAATAAGAATTTA
CATATAAAACAATAACAATTCCGAATATCACAATTACGTACGATGTTGTA
AATGTGATAAAGAAACTGTCCATATCAATTAAATTATCATCTTGTTCATT
GCCAATTGAAGCCTCCGGCATAGTTGCTGGTGATCTGCAAATGGGCAATG
GCAGTCCACAAAGAAAAGTATTTCCCTCATAGCTACTCTCGTTGAAGGTT
GCAAATTGTGCTTTCCATTCTGGAATTTCGCCTGATAAGTTATTGTATGC
CACACTGAAAACCTCCAATGTCTTTAACTCCACTAGTTGATGAGGGATTT
TCCCATTCAATTTGTTGTTGGAAAGATCCAAACTTTCGACATGCTTCAAG
TTTGAAAATGTTGATGGGATCGATCCTGTCAAGTTATTGTGCGAGAGATT
CAATGTTTGAATCCTTGTCAAATTTCCAATTTGAGGAGGAATATGACCAA
TTAGCTTGTTGCAAGAAAGATCAAGTCCTGATAGGAGGCTAAGCACTTTT
CCTTGGTAAATGTACGCAATGTTCTTTGTTGTGAACTCAAAAATTTCATG
GTTTTGCTTTTCTAAAAATCCCTGATGGCCTTCGATGGAAAAAAATATTT
CAAATTGCTCATCAGGACTAGAACTATTGCTGTAACTTTCATGAAGTGTG
GTGTTATCAAAGCAAGGAGGAATAGGACCGTGAAGATTATTATTAGAAAG
ATCTAACAAT
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