CX671771

Overview
NameCX671771
Unique NameCX671771
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length806
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11181 contig Csv1_Contig11181:40..845. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX671771 vs. ExPASy Swiss-Prot
Match: CH10_CLOBO (10 kDa chaperonin OS=Clostridium botulinum GN=groS PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 8.158e-19
Identity = 44/92 (47.83%), Postives = 67/92 (72.83%), Query Frame = 1
Query:  265 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 540
            IKPLGDRV++K    EEKT  GI LP +A+ KPQ  E+VAVG G  V   ++++ VK G +V++S+YAG E++ +G  ++ILR++D++ I+E
Sbjct:    3 IKPLGDRVVIKRLEAEEKTKSGIVLPGSAKEKPQEAEIVAVGPGGLVDGKEVNMEVKVGDRVLFSQYAGNEVKIDGEEYIILRQNDILAIVE 94          

HSP 2 Score: 68.9366 bits (167), Expect = 3.670e-11
Identity = 37/82 (45.12%), Postives = 53/82 (64.63%), Query Frame = 1
Query:  559 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGDDFKGSDGTNYI 804
            +KPL DRV IK  EAEE T  G++L  ++KEKP    ++AVGPG L  +G    + +  G+ V++S+YAG++ K  DG  YI
Sbjct:    3 IKPLGDRVVIKRLEAEEKTKSGIVLPGSAKEKPQEAEIVAVGPGGL-VDGKEVNMEVKVGDRVLFSQYAGNEVK-IDGEEYI 82          
BLAST of CX671771 vs. ExPASy Swiss-Prot
Match: CH10_BACWK (10 kDa chaperonin OS=Bacillus weihenstephanensis (strain KBAB4) GN=groS PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 8.158e-19
Identity = 44/92 (47.83%), Postives = 67/92 (72.83%), Query Frame = 1
Query:  265 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTV-GKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGIL 537
            +KPLGDRV++++   EEKT  GI LP TA+ KPQ G+V+AVG G+ +    ++ + V  G  +I+SKYAGTE+++ G ++LILRE D++ I+
Sbjct:    2 LKPLGDRVVIELVQAEEKTASGIVLPETAKEKPQEGKVIAVGTGRVLENGERVALEVAAGDLIIFSKYAGTEVKYEGTDYLILRESDILAII 93          

HSP 2 Score: 83.1889 bits (204), Expect = 1.881e-15
Identity = 42/82 (51.22%), Postives = 58/82 (70.73%), Query Frame = 1
Query:  559 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGDDFKGSDGTNYI 804
            LKPL DRV I++ +AEE TA G++L E +KEKP  G VIAVG G + E G R  L +A G+ +++SKYAG + K  +GT+Y+
Sbjct:    2 LKPLGDRVVIELVQAEEKTASGIVLPETAKEKPQEGKVIAVGTGRVLENGERVALEVAAGDLIIFSKYAGTEVK-YEGTDYL 82          
BLAST of CX671771 vs. ExPASy Swiss-Prot
Match: CH10_BACST (10 kDa chaperonin OS=Bacillus stearothermophilus GN=groS PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 8.158e-19
Identity = 44/92 (47.83%), Postives = 68/92 (73.91%), Query Frame = 1
Query:  265 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGK-TKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGIL 537
            +KPLGDRV++++   EEKT  GI LP TA+ KPQ G VVAVG+G+ +    ++   V+ G ++I+SKYAGTE++++G  +LILRE D++ ++
Sbjct:    2 LKPLGDRVVIEVIETEEKTASGIVLPDTAKEKPQEGRVVAVGKGRVLDSGERVAPEVEVGDRIIFSKYAGTEVKYDGKEYLILRESDILAVI 93          

HSP 2 Score: 74.7146 bits (182), Expect = 6.689e-13
Identity = 38/82 (46.34%), Postives = 53/82 (64.63%), Query Frame = 1
Query:  559 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGDDFKGSDGTNYI 804
            LKPL DRV I+V E EE TA G++L + +KEKP  G V+AVG G + + G R    +  G+ +++SKYAG + K  DG  Y+
Sbjct:    2 LKPLGDRVVIEVIETEEKTASGIVLPDTAKEKPQEGRVVAVGKGRVLDSGERVAPEVEVGDRIIFSKYAGTEVK-YDGKEYL 82          
BLAST of CX671771 vs. ExPASy Swiss-Prot
Match: CH10_BACLD (10 kDa chaperonin OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=groS PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 8.158e-19
Identity = 43/92 (46.74%), Postives = 68/92 (73.91%), Query Frame = 1
Query:  265 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTV-GKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGIL 537
            +KPLGDRV++++   EEKT  GI LP +A+ KPQ G+VVA G G+ +    ++ + VK G ++I+SKYAGTE+++ G ++LILRE D++ ++
Sbjct:    2 LKPLGDRVVIELVESEEKTASGIVLPDSAKEKPQEGKVVAAGSGRVLESGERVALEVKTGDRIIFSKYAGTEVKYEGTDYLILRESDILAVI 93          

HSP 2 Score: 78.5666 bits (192), Expect = 4.632e-14
Identity = 38/82 (46.34%), Postives = 57/82 (69.51%), Query Frame = 1
Query:  559 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGDDFKGSDGTNYI 804
            LKPL DRV I++ E+EE TA G++L +++KEKP  G V+A G G + E G R  L +  G+ +++SKYAG + K  +GT+Y+
Sbjct:    2 LKPLGDRVVIELVESEEKTASGIVLPDSAKEKPQEGKVVAAGSGRVLESGERVALEVKTGDRIIFSKYAGTEVK-YEGTDYL 82          
BLAST of CX671771 vs. ExPASy Swiss-Prot
Match: CH10_BACCR (10 kDa chaperonin OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=groS PE=3 SV=2)

HSP 1 Score: 94.3597 bits (233), Expect = 8.158e-19
Identity = 44/92 (47.83%), Postives = 67/92 (72.83%), Query Frame = 1
Query:  265 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTV-GKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGIL 537
            +KPLGDRV++++   EEKT  GI LP TA+ KPQ G+VVAVG G+ +    ++ + V  G  +I+SKYAGTE+++ G ++LILRE D++ ++
Sbjct:    2 LKPLGDRVVIELVQAEEKTASGIVLPDTAKEKPQEGKVVAVGTGRVLENGERVALEVAAGDLIIFSKYAGTEVKYEGTDYLILRESDILAVI 93          

HSP 2 Score: 81.6481 bits (200), Expect = 5.472e-15
Identity = 40/82 (48.78%), Postives = 58/82 (70.73%), Query Frame = 1
Query:  559 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGDDFKGSDGTNYI 804
            LKPL DRV I++ +AEE TA G++L + +KEKP  G V+AVG G + E G R  L +A G+ +++SKYAG + K  +GT+Y+
Sbjct:    2 LKPLGDRVVIELVQAEEKTASGIVLPDTAKEKPQEGKVVAVGTGRVLENGERVALEVAAGDLIIFSKYAGTEVK-YEGTDYL 82          
BLAST of CX671771 vs. ExPASy Swiss-Prot
Match: CH10_BACC4 (10 kDa chaperonin OS=Bacillus cereus (strain B4264) GN=groS PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 8.158e-19
Identity = 44/92 (47.83%), Postives = 67/92 (72.83%), Query Frame = 1
Query:  265 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTV-GKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGIL 537
            +KPLGDRV++++   EEKT  GI LP TA+ KPQ G+VVAVG G+ +    ++ + V  G  +I+SKYAGTE+++ G ++LILRE D++ ++
Sbjct:    2 LKPLGDRVVIELVQAEEKTASGIVLPDTAKEKPQEGKVVAVGTGRVLENGERVALEVAAGDLIIFSKYAGTEVKYEGTDYLILRESDILAVI 93          

HSP 2 Score: 81.6481 bits (200), Expect = 5.472e-15
Identity = 40/82 (48.78%), Postives = 58/82 (70.73%), Query Frame = 1
Query:  559 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGDDFKGSDGTNYI 804
            LKPL DRV I++ +AEE TA G++L + +KEKP  G V+AVG G + E G R  L +A G+ +++SKYAG + K  +GT+Y+
Sbjct:    2 LKPLGDRVVIELVQAEEKTASGIVLPDTAKEKPQEGKVVAVGTGRVLENGERVALEVAAGDLIIFSKYAGTEVK-YEGTDYL 82          
BLAST of CX671771 vs. ExPASy Swiss-Prot
Match: CH10_BACC2 (10 kDa chaperonin OS=Bacillus cereus (strain G9842) GN=groS PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 8.158e-19
Identity = 44/92 (47.83%), Postives = 67/92 (72.83%), Query Frame = 1
Query:  265 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTV-GKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGIL 537
            +KPLGDRV++++   EEKT  GI LP TA+ KPQ G+VVAVG G+ +    ++ + V  G  +I+SKYAGTE+++ G ++LILRE D++ ++
Sbjct:    2 LKPLGDRVVIELVQAEEKTASGIVLPDTAKEKPQEGKVVAVGTGRVLENGERVALEVAAGDLIIFSKYAGTEVKYEGTDYLILRESDILAVI 93          

HSP 2 Score: 81.6481 bits (200), Expect = 5.472e-15
Identity = 40/82 (48.78%), Postives = 58/82 (70.73%), Query Frame = 1
Query:  559 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGDDFKGSDGTNYI 804
            LKPL DRV I++ +AEE TA G++L + +KEKP  G V+AVG G + E G R  L +A G+ +++SKYAG + K  +GT+Y+
Sbjct:    2 LKPLGDRVVIELVQAEEKTASGIVLPDTAKEKPQEGKVVAVGTGRVLENGERVALEVAAGDLIIFSKYAGTEVK-YEGTDYL 82          
BLAST of CX671771 vs. ExPASy Swiss-Prot
Match: CH10_PROVI (10 kDa chaperonin OS=Prosthecochloris vibrioformis (strain DSM 265) (strain DSM 265) GN=groS PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.065e-18
Identity = 46/93 (49.46%), Postives = 64/93 (68.82%), Query Frame = 1
Query:  262 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTK-LDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGIL 537
            ++KPL DRV+VK    EEKT GG+++P T + KP  GEVVAVG GK     + L++ VK G +V+Y KY+GTE+   G ++LI+RE D+  IL
Sbjct:    2 NLKPLADRVIVKPAPAEEKTKGGLYIPDTGKEKPMYGEVVAVGAGKMSDSGQLLEMPVKAGDKVLYGKYSGTEVSVEGEDYLIMRESDIFAIL 94          

HSP 2 Score: 72.0182 bits (175), Expect = 4.336e-12
Identity = 35/83 (42.17%), Postives = 51/83 (61.45%), Query Frame = 1
Query:  556 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGDDFKGSDGTNYI 804
            +LKPL DRV +K A AEE T GGL + +  KEKP  G V+AVG G + + G    + +  G+ V+Y KY+G +    +G +Y+
Sbjct:    2 NLKPLADRVIVKPAPAEEKTKGGLYIPDTGKEKPMYGEVVAVGAGKMSDSGQLLEMPVKAGDKVLYGKYSGTEV-SVEGEDYL 83          
BLAST of CX671771 vs. ExPASy Swiss-Prot
Match: CH10_LISMO (10 kDa chaperonin OS=Listeria monocytogenes GN=groS PE=3 SV=2)

HSP 1 Score: 93.9745 bits (232), Expect = 1.065e-18
Identity = 44/91 (48.35%), Postives = 66/91 (72.53%), Query Frame = 1
Query:  265 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGK-TKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGI 534
            +KPLGDRV++++   EEKT  GI LP +A+ KPQ+G++VAVG G+ +   TK  + V  G  VI++KY+GTE+ + G ++LILRE D++ I
Sbjct:    2 LKPLGDRVVIEVLEAEEKTASGIVLPDSAKEKPQSGKIVAVGSGRVLDNGTKEPLEVAEGDTVIFAKYSGTEVTYEGTDYLILRESDILAI 92          

HSP 2 Score: 83.9593 bits (206), Expect = 1.103e-15
Identity = 39/82 (47.56%), Postives = 61/82 (74.39%), Query Frame = 1
Query:  559 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGDDFKGSDGTNYI 804
            LKPL DRV I+V EAEE TA G++L +++KEKP  G ++AVG G + + G ++PL +A G+TV+++KY+G +    +GT+Y+
Sbjct:    2 LKPLGDRVVIEVLEAEEKTASGIVLPDSAKEKPQSGKIVAVGSGRVLDNGTKEPLEVAEGDTVIFAKYSGTEVT-YEGTDYL 82          
BLAST of CX671771 vs. ExPASy Swiss-Prot
Match: CH10_LISMH (10 kDa chaperonin OS=Listeria monocytogenes serotype 4a (strain HCC23) GN=groS PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.065e-18
Identity = 44/91 (48.35%), Postives = 66/91 (72.53%), Query Frame = 1
Query:  265 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGK-TKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGI 534
            +KPLGDRV++++   EEKT  GI LP +A+ KPQ+G++VAVG G+ +   TK  + V  G  VI++KY+GTE+ + G ++LILRE D++ I
Sbjct:    2 LKPLGDRVVIEVLEAEEKTASGIVLPDSAKEKPQSGKIVAVGSGRVLDNGTKEPLEVAEGDTVIFAKYSGTEVTYEGTDYLILRESDILAI 92          

HSP 2 Score: 83.9593 bits (206), Expect = 1.103e-15
Identity = 39/82 (47.56%), Postives = 61/82 (74.39%), Query Frame = 1
Query:  559 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGDDFKGSDGTNYI 804
            LKPL DRV I+V EAEE TA G++L +++KEKP  G ++AVG G + + G ++PL +A G+TV+++KY+G +    +GT+Y+
Sbjct:    2 LKPLGDRVVIEVLEAEEKTASGIVLPDSAKEKPQSGKIVAVGSGRVLDNGTKEPLEVAEGDTVIFAKYSGTEVT-YEGTDYL 82          
The following BLAST results are available for this feature:
BLAST of CX671771 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 492
Match NameE-valueIdentityDescription
CH10_CLOBO8.158e-1947.8310 kDa chaperonin OS=Clostridium botulinum GN=groS... [more]
CH10_BACWK8.158e-1947.8310 kDa chaperonin OS=Bacillus weihenstephanensis (... [more]
CH10_BACST8.158e-1947.8310 kDa chaperonin OS=Bacillus stearothermophilus G... [more]
CH10_BACLD8.158e-1946.7410 kDa chaperonin OS=Bacillus licheniformis (strai... [more]
CH10_BACCR8.158e-1947.8310 kDa chaperonin OS=Bacillus cereus (strain ATCC ... [more]
CH10_BACC48.158e-1947.8310 kDa chaperonin OS=Bacillus cereus (strain B4264... [more]
CH10_BACC28.158e-1947.8310 kDa chaperonin OS=Bacillus cereus (strain G9842... [more]
CH10_PROVI1.065e-1849.4610 kDa chaperonin OS=Prosthecochloris vibrioformis... [more]
CH10_LISMO1.065e-1848.3510 kDa chaperonin OS=Listeria monocytogenes GN=gro... [more]
CH10_LISMH1.065e-1848.3510 kDa chaperonin OS=Listeria monocytogenes seroty... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_13A11_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-13A11-A21-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671771 ID=CX671771; Name=CX671771; organism=Citrus sinensis; type=EST; length=806bp
AGAAACCTTATCAAACTACTCGCTCGCTTCTCGCTTATCATTTCCAATCA
GAATCTCTCTCGCTCTCTCTGCATCTGCAAGCAGATGGCGACAGCTCAGC
TAACAGCGTCATCAATTAAGGTTCCAGCAAGGAGCTTGACTTCATTCGAT
GGTCTCAGACCGTCTTCCGTCAAGTTCGCTTCCGTCGGAGGTGCTCCCAG
CCAACGCTCTTTCCGTCGCTTGGTCGTTAAAGCCGCTGCAGTCGTGGCTC
CCAAGTACACTTCAATTAAACCTTTGGGTGATAGAGTGCTGGTGAAAATC
AAGACTGTAGAGGAGAAAACTGATGGTGGTATTTTTCTGCCATCTACAGC
TCAAACAAAGCCTCAAGCAGGTGAGGTGGTAGCTGTTGGCGAGGGGAAGA
CAGTTGGGAAGACTAAACTGGACATATCTGTGAAGCCTGGGACCCAGGTC
ATCTATTCGAAGTATGCAGGGACTGAGTTGGAGTTCAATGGCGCAAATCA
TCTCATATTGAGGGAGGATGACGTAGTTGGCATTCTTGAAACAGATGAAA
TCAAGGATCTTAAGCCCCTTAATGACAGAGTTTTCATCAAGGTTGCTGAG
GCTGAGGAGACAACTGCTGGAGGTTTGTTGTTGACGGAGGCAAGCAAGGA
GAAACCTTCCATTGGAATGGTCATTGCTGTTGGACCCGGTCCTCTAGATG
AGGAAGGTAATAGGAAACCTCTATCCATTGCTCCAGGGAACACGGTGATG
TATTCCAAGTATGCAGGGGATGACTTCAAGGGCAGTGATGGTACCAACTA
CATTGC
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