CX671770

Overview
NameCX671770
Unique NameCX671770
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length906
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX671770 vs. ExPASy Swiss-Prot
Match: CH10_BACST (10 kDa chaperonin OS=Bacillus stearothermophilus GN=groS PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 9.822e-19
Identity = 44/92 (47.83%), Postives = 68/92 (73.91%), Query Frame = -3 
Query:  467 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGK-TKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGIL 739
            +KPLGDRV++++   EEKT  GI LP TA+ KPQ G VVAVG+G+ +    ++   V+ G ++I+SKYAGTE++++G  +LILRE D++ ++
Sbjct:    2 LKPLGDRVVIEVIETEEKTASGIVLPDTAKEKPQEGRVVAVGKGRVLDSGERVAPEVEVGDRIIFSKYAGTEVKYDGKEYLILRESDILAVI 93

HSP 2 Score: 85.8853 bits (211), Expect = 3.493e-16
Identity = 43/93 (46.24%), Postives = 62/93 (66.67%), Query Frame = -3 
Query:  167 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 445
            LKPL DRV I+V E EE TA G++L + +KEKP  G V+AVG G + + G R    +  G+ +++SKYAG + K  DG  Y+ LR S+++AV+
Sbjct:    2 LKPLGDRVVIEVIETEEKTASGIVLPDTAKEKPQEGRVVAVGKGRVLDSGERVAPEVEVGDRIIFSKYAGTEVK-YDGKEYLILRESDILAVI 93
[Close]
BLAST of CX671770 vs. ExPASy Swiss-Prot
Match: CH10_BACLD (10 kDa chaperonin OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=groS PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 9.822e-19
Identity = 43/92 (46.74%), Postives = 68/92 (73.91%), Query Frame = -3 
Query:  467 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTV-GKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGIL 739
            +KPLGDRV++++   EEKT  GI LP +A+ KPQ G+VVA G G+ +    ++ + VK G ++I+SKYAGTE+++ G ++LILRE D++ ++
Sbjct:    2 LKPLGDRVVIELVESEEKTASGIVLPDSAKEKPQEGKVVAAGSGRVLESGERVALEVKTGDRIIFSKYAGTEVKYEGTDYLILRESDILAVI 93

HSP 2 Score: 89.7373 bits (221), Expect = 2.419e-17
Identity = 43/93 (46.24%), Postives = 66/93 (70.97%), Query Frame = -3 
Query:  167 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 445
            LKPL DRV I++ E+EE TA G++L +++KEKP  G V+A G G + E G R  L +  G+ +++SKYAG + K  +GT+Y+ LR S+++AV+
Sbjct:    2 LKPLGDRVVIELVESEEKTASGIVLPDSAKEKPQEGKVVAAGSGRVLESGERVALEVKTGDRIIFSKYAGTEVK-YEGTDYLILRESDILAVI 93
[Close]
BLAST of CX671770 vs. ExPASy Swiss-Prot
Match: CH10_BACCR (10 kDa chaperonin OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=groS PE=3 SV=2)

HSP 1 Score: 94.3597 bits (233), Expect = 9.822e-19
Identity = 44/92 (47.83%), Postives = 67/92 (72.83%), Query Frame = -3 
Query:  467 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTV-GKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGIL 739
            +KPLGDRV++++   EEKT  GI LP TA+ KPQ G+VVAVG G+ +    ++ + V  G  +I+SKYAGTE+++ G ++LILRE D++ ++
Sbjct:    2 LKPLGDRVVIELVQAEEKTASGIVLPDTAKEKPQEGKVVAVGTGRVLENGERVALEVAAGDLIIFSKYAGTEVKYEGTDYLILRESDILAVI 93

HSP 2 Score: 92.8189 bits (229), Expect = 2.858e-18
Identity = 45/93 (48.39%), Postives = 67/93 (72.04%), Query Frame = -3 
Query:  167 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 445
            LKPL DRV I++ +AEE TA G++L + +KEKP  G V+AVG G + E G R  L +A G+ +++SKYAG + K  +GT+Y+ LR S+++AV+
Sbjct:    2 LKPLGDRVVIELVQAEEKTASGIVLPDTAKEKPQEGKVVAVGTGRVLENGERVALEVAAGDLIIFSKYAGTEVK-YEGTDYLILRESDILAVI 93
[Close]
BLAST of CX671770 vs. ExPASy Swiss-Prot
Match: CH10_BACC4 (10 kDa chaperonin OS=Bacillus cereus (strain B4264) GN=groS PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 9.822e-19
Identity = 44/92 (47.83%), Postives = 67/92 (72.83%), Query Frame = -3 
Query:  467 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTV-GKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGIL 739
            +KPLGDRV++++   EEKT  GI LP TA+ KPQ G+VVAVG G+ +    ++ + V  G  +I+SKYAGTE+++ G ++LILRE D++ ++
Sbjct:    2 LKPLGDRVVIELVQAEEKTASGIVLPDTAKEKPQEGKVVAVGTGRVLENGERVALEVAAGDLIIFSKYAGTEVKYEGTDYLILRESDILAVI 93

HSP 2 Score: 92.8189 bits (229), Expect = 2.858e-18
Identity = 45/93 (48.39%), Postives = 67/93 (72.04%), Query Frame = -3 
Query:  167 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 445
            LKPL DRV I++ +AEE TA G++L + +KEKP  G V+AVG G + E G R  L +A G+ +++SKYAG + K  +GT+Y+ LR S+++AV+
Sbjct:    2 LKPLGDRVVIELVQAEEKTASGIVLPDTAKEKPQEGKVVAVGTGRVLENGERVALEVAAGDLIIFSKYAGTEVK-YEGTDYLILRESDILAVI 93
[Close]
BLAST of CX671770 vs. ExPASy Swiss-Prot
Match: CH10_BACC2 (10 kDa chaperonin OS=Bacillus cereus (strain G9842) GN=groS PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 9.822e-19
Identity = 44/92 (47.83%), Postives = 67/92 (72.83%), Query Frame = -3 
Query:  467 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTV-GKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGIL 739
            +KPLGDRV++++   EEKT  GI LP TA+ KPQ G+VVAVG G+ +    ++ + V  G  +I+SKYAGTE+++ G ++LILRE D++ ++
Sbjct:    2 LKPLGDRVVIELVQAEEKTASGIVLPDTAKEKPQEGKVVAVGTGRVLENGERVALEVAAGDLIIFSKYAGTEVKYEGTDYLILRESDILAVI 93

HSP 2 Score: 92.8189 bits (229), Expect = 2.858e-18
Identity = 45/93 (48.39%), Postives = 67/93 (72.04%), Query Frame = -3 
Query:  167 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 445
            LKPL DRV I++ +AEE TA G++L + +KEKP  G V+AVG G + E G R  L +A G+ +++SKYAG + K  +GT+Y+ LR S+++AV+
Sbjct:    2 LKPLGDRVVIELVQAEEKTASGIVLPDTAKEKPQEGKVVAVGTGRVLENGERVALEVAAGDLIIFSKYAGTEVK-YEGTDYLILRESDILAVI 93
[Close]
BLAST of CX671770 vs. ExPASy Swiss-Prot
Match: CH10_ARTCA (10 kDa chaperonin OS=Arthrobacter chlorophenolicus (strain A6 / ATCC 700700 / DSM 12829 / JCM 12360) GN=groS PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 9.822e-19
Identity = 45/93 (48.39%), Postives = 68/93 (73.12%), Query Frame = -3 
Query:  167 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 445
            +KPL DR+ ++  EAE+TTA GLL+ ++++EKP  G V+AVGPG   E+GNR P+ +A G+ V+YSKY G + K + GT Y+ L A +V+A++
Sbjct:    5 IKPLEDRIVVRPLEAEQTTASGLLIPDSAQEKPQEGEVVAVGPGRF-EDGNRVPVDVAVGDVVIYSKYGGTEVK-TGGTEYLVLSARDVLAIV 95

HSP 2 Score: 84.7297 bits (208), Expect = 7.783e-16
Identity = 42/92 (45.65%), Postives = 59/92 (64.13%), Query Frame = -3 
Query:  467 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGIL 742
            SIKPL DR++V+    E+ T  G+ +P +AQ KPQ GEVVAVG G+     ++ + V  G  VIYSKY GTE++  G  +L+L   DV+ I+
Sbjct:    4 SIKPLEDRIVVRPLEAEQTTASGLLIPDSAQEKPQEGEVVAVGPGRFEDGNRVPVDVAVGDVVIYSKYGGTEVKTGGTEYLVLSARDVLAIV 95
[Close]
BLAST of CX671770 vs. ExPASy Swiss-Prot
Match: CH10_RENSM (10 kDa chaperonin OS=Renibacterium salmoninarum (strain ATCC 33209 / DSM 20767 / IFO 15589) GN=groS PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.283e-18
Identity = 42/93 (45.16%), Postives = 67/93 (72.04%), Query Frame = -3 
Query:  167 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 445
            +KPL DR+ ++  +AE+TTA GL++ +++KEKP  G V+AVGPG +D+ GNR P+ +A G+ V+YSKY G + K + G   + L A +V+A++
Sbjct:    5 IKPLEDRIVVRQLDAEQTTASGLVIPDSAKEKPQEGEVVAVGPGRVDDNGNRVPVDVAVGDVVLYSKYGGTEVK-TGGEELLVLSARDVLAIV 96

HSP 2 Score: 76.2554 bits (186), Expect = 2.768e-13
Identity = 40/93 (43.01%), Postives = 58/93 (62.37%), Query Frame = -3 
Query:  467 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGK-TKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGIL 742
            SIKPL DR++V+    E+ T  G+ +P +A+ KPQ GEVVAVG G+      ++ + V  G  V+YSKY GTE++  G   L+L   DV+ I+
Sbjct:    4 SIKPLEDRIVVRQLDAEQTTASGLVIPDSAKEKPQEGEVVAVGPGRVDDNGNRVPVDVAVGDVVLYSKYGGTEVKTGGEELLVLSARDVLAIV 96
[Close]
BLAST of CX671770 vs. ExPASy Swiss-Prot
Match: CH10_PROVI (10 kDa chaperonin OS=Prosthecochloris vibrioformis (strain DSM 265) (strain DSM 265) GN=groS PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.283e-18
Identity = 46/93 (49.46%), Postives = 64/93 (68.82%), Query Frame = -3 
Query:  467 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTK-LDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGIL 742
            ++KPL DRV+VK    EEKT GG+++P T + KP  GEVVAVG GK     + L++ VK G +V+Y KY+GTE+   G ++LI+RE D+  IL
Sbjct:    2 NLKPLADRVIVKPAPAEEKTKGGLYIPDTGKEKPMYGEVVAVGAGKMSDSGQLLEMPVKAGDKVLYGKYSGTEVSVEGEDYLIMRESDIFAIL 94

HSP 2 Score: 82.0333 bits (201), Expect = 5.045e-15
Identity = 39/94 (41.49%), Postives = 59/94 (62.77%), Query Frame = -3 
Query:  167 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 448
            +LKPL DRV +K A AEE T GGL + +  KEKP  G V+AVG G + + G    + +  G+ V+Y KY+G +    +G +Y+ +R S++ A+L
Sbjct:    2 NLKPLADRVIVKPAPAEEKTKGGLYIPDTGKEKPMYGEVVAVGAGKMSDSGQLLEMPVKAGDKVLYGKYSGTEV-SVEGEDYLIMRESDIFAIL 94
[Close]
BLAST of CX671770 vs. ExPASy Swiss-Prot
Match: CH10_LISMO (10 kDa chaperonin OS=Listeria monocytogenes GN=groS PE=3 SV=2)

HSP 1 Score: 93.9745 bits (232), Expect = 1.283e-18
Identity = 44/91 (48.35%), Postives = 66/91 (72.53%), Query Frame = -3 
Query:  470 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGK-TKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGI 739
            +KPLGDRV++++   EEKT  GI LP +A+ KPQ+G++VAVG G+ +   TK  + V  G  VI++KY+GTE+ + G ++LILRE D++ I
Sbjct:    2 LKPLGDRVVIEVLEAEEKTASGIVLPDSAKEKPQSGKIVAVGSGRVLDNGTKEPLEVAEGDTVIFAKYSGTEVTYEGTDYLILRESDILAI 92

HSP 2 Score: 93.9745 bits (232), Expect = 1.283e-18
Identity = 43/92 (46.74%), Postives = 69/92 (75.00%), Query Frame = -3 
Query:  170 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAV 445
            LKPL DRV I+V EAEE TA G++L +++KEKP  G ++AVG G + + G ++PL +A G+TV+++KY+G +    +GT+Y+ LR S+++A+
Sbjct:    2 LKPLGDRVVIEVLEAEEKTASGIVLPDSAKEKPQSGKIVAVGSGRVLDNGTKEPLEVAEGDTVIFAKYSGTEVT-YEGTDYLILRESDILAI 92
[Close]
BLAST of CX671770 vs. ExPASy Swiss-Prot
Match: CH10_LISMH (10 kDa chaperonin OS=Listeria monocytogenes serotype 4a (strain HCC23) GN=groS PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.283e-18
Identity = 44/91 (48.35%), Postives = 66/91 (72.53%), Query Frame = -3 
Query:  470 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGK-TKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGI 739
            +KPLGDRV++++   EEKT  GI LP +A+ KPQ+G++VAVG G+ +   TK  + V  G  VI++KY+GTE+ + G ++LILRE D++ I
Sbjct:    2 LKPLGDRVVIEVLEAEEKTASGIVLPDSAKEKPQSGKIVAVGSGRVLDNGTKEPLEVAEGDTVIFAKYSGTEVTYEGTDYLILRESDILAI 92

HSP 2 Score: 93.9745 bits (232), Expect = 1.283e-18
Identity = 43/92 (46.74%), Postives = 69/92 (75.00%), Query Frame = -3 
Query:  170 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAV 445
            LKPL DRV I+V EAEE TA G++L +++KEKP  G ++AVG G + + G ++PL +A G+TV+++KY+G +    +GT+Y+ LR S+++A+
Sbjct:    2 LKPLGDRVVIEVLEAEEKTASGIVLPDSAKEKPQSGKIVAVGSGRVLDNGTKEPLEVAEGDTVIFAKYSGTEVT-YEGTDYLILRESDILAI 92
The following BLAST results are available for this feature:
BLAST of CX671770 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH10_BACST9.822e-1947.8310 kDa chaperonin OS=Bacillus stearothermophilus G... [more]
CH10_BACLD9.822e-1946.7410 kDa chaperonin OS=Bacillus licheniformis (strai... [more]
CH10_BACCR9.822e-1947.8310 kDa chaperonin OS=Bacillus cereus (strain ATCC ... [more]
CH10_BACC49.822e-1947.8310 kDa chaperonin OS=Bacillus cereus (strain B4264... [more]
CH10_BACC29.822e-1947.8310 kDa chaperonin OS=Bacillus cereus (strain G9842... [more]
CH10_ARTCA9.822e-1948.3910 kDa chaperonin OS=Arthrobacter chlorophenolicus... [more]
CH10_RENSM1.283e-1845.1610 kDa chaperonin OS=Renibacterium salmoninarum (s... [more]
CH10_PROVI1.283e-1849.4610 kDa chaperonin OS=Prosthecochloris vibrioformis... [more]
CH10_LISMO1.283e-1848.3510 kDa chaperonin OS=Listeria monocytogenes GN=gro... [more]
CH10_LISMH1.283e-1848.3510 kDa chaperonin OS=Listeria monocytogenes seroty... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_13A11_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-13A11-A21-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671770 ID=CX671770; Name=CX671770; organism=Citrus sinensis; type=EST; length=906bp
TTTTTTTTAAGCAAAAAACAAGCAGCAATTCGATTGATCAAGCTGCAATT
CTTTATGTTCAAATAAGATTACATTCAAAATCCGTATGCCTTGAGGCAAC
TCAACCATAAAATTCAATTCACTAATACATATAAAGCCTCGCTCAAGTAA
ACACAGACAACTAAGAGAGCACAGCCATCACTTCAGAAGCTCTTAAAGCA
ATGTAGTTGGTACCATCACTGCCCTTGAAGTCATTCCCTGCATACTTGGA
ATACATCACCGTGTTCCCTGGAGCAATGGATAGAGGTTTCCTATTACCTT
CCTCATCTAGAGGACCGGGTCCAACAGCAATGACCATTCCAATGGAAGGT
TTCTCCTTGCTTGCCTCCGTCAACAACAAACCTCCAGCAGTTGTCTCCTC
AGCCTCAGCAACCTTGATGAAAACTCTGTCATTAAGGGGCTTAAGATCCT
TGATTTCATCTGTTTCAAGAATGCCAACTACGTCATCCTCCCTCAATATG
AGATGATTTGCGCCATTGAACTCCAACTCAGTCCCTGCATACTTCGAATA
GATGACCTGGGTCCCAGGCTTCACAGATATGTCCAGTTTAGTCTTCCCAA
CTGTCTTCCCCTCGCCAACAGCTACCACCTCACCTGCTTGAGGCTTTGTT
TGAGCTGTAGATGGCAGAAAAATACCACCATCAGTTTTCTCCTCTACAGT
CTTGATTTTCACCAGCACTCTATCACCCAAAGGTTTAATTGAAGTGTACT
TGGGAGCCACGACTGCAGCGGCTTTAACGACCAAGCGACGGAAAGAGCGT
TGGCTGGGAGCACCTCCGACGGAAGCGAACTTGACGGAAGACGGTCTGAG
ACCATCGAATGAAGTCAAGCTCCTTGCTGGAACCTTAATTGATGACGCTG
TTAGCT
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