CX671770

Overview
NameCX671770
Unique NameCX671770
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length906
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX671770 vs. ExPASy Swiss-Prot
Match: CH10_LISMF (10 kDa chaperonin OS=Listeria monocytogenes serotype 4b (strain F2365) GN=groS PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.283e-18
Identity = 44/91 (48.35%), Postives = 66/91 (72.53%), Query Frame = -3 
Query:  470 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGK-TKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGI 739
            +KPLGDRV++++   EEKT  GI LP +A+ KPQ+G++VAVG G+ +   TK  + V  G  VI++KY+GTE+ + G ++LILRE D++ I
Sbjct:    2 LKPLGDRVVIEVLEAEEKTASGIVLPDSAKEKPQSGKIVAVGSGRVLDNGTKEPLEVAEGDTVIFAKYSGTEVTYEGTDYLILRESDILAI 92

HSP 2 Score: 93.9745 bits (232), Expect = 1.283e-18
Identity = 43/92 (46.74%), Postives = 69/92 (75.00%), Query Frame = -3 
Query:  170 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAV 445
            LKPL DRV I+V EAEE TA G++L +++KEKP  G ++AVG G + + G ++PL +A G+TV+++KY+G +    +GT+Y+ LR S+++A+
Sbjct:    2 LKPLGDRVVIEVLEAEEKTASGIVLPDSAKEKPQSGKIVAVGSGRVLDNGTKEPLEVAEGDTVIFAKYSGTEVT-YEGTDYLILRESDILAI 92
[Close]
BLAST of CX671770 vs. ExPASy Swiss-Prot
Match: CH10_LISMC (10 kDa chaperonin OS=Listeria monocytogenes serotype 4b (strain Clip81459) GN=groS PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.283e-18
Identity = 44/91 (48.35%), Postives = 66/91 (72.53%), Query Frame = -3 
Query:  470 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGK-TKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGI 739
            +KPLGDRV++++   EEKT  GI LP +A+ KPQ+G++VAVG G+ +   TK  + V  G  VI++KY+GTE+ + G ++LILRE D++ I
Sbjct:    2 LKPLGDRVVIEVLEAEEKTASGIVLPDSAKEKPQSGKIVAVGSGRVLDNGTKEPLEVAEGDTVIFAKYSGTEVTYEGTDYLILRESDILAI 92

HSP 2 Score: 93.9745 bits (232), Expect = 1.283e-18
Identity = 43/92 (46.74%), Postives = 69/92 (75.00%), Query Frame = -3 
Query:  170 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAV 445
            LKPL DRV I+V EAEE TA G++L +++KEKP  G ++AVG G + + G ++PL +A G+TV+++KY+G +    +GT+Y+ LR S+++A+
Sbjct:    2 LKPLGDRVVIEVLEAEEKTASGIVLPDSAKEKPQSGKIVAVGSGRVLDNGTKEPLEVAEGDTVIFAKYSGTEVT-YEGTDYLILRESDILAI 92
[Close]
BLAST of CX671770 vs. ExPASy Swiss-Prot
Match: CH10_LISIN (10 kDa chaperonin OS=Listeria innocua GN=groS PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.283e-18
Identity = 44/91 (48.35%), Postives = 66/91 (72.53%), Query Frame = -3 
Query:  470 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGK-TKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGI 739
            +KPLGDRV++++   EEKT  GI LP +A+ KPQ+G++VAVG G+ +   TK  + V  G  VI++KY+GTE+ + G ++LILRE D++ I
Sbjct:    2 LKPLGDRVVIEVLEAEEKTASGIVLPDSAKEKPQSGKIVAVGSGRVLDNGTKEPLEVAEGDTVIFAKYSGTEVTYEGTDYLILRESDILAI 92

HSP 2 Score: 93.9745 bits (232), Expect = 1.283e-18
Identity = 43/92 (46.74%), Postives = 69/92 (75.00%), Query Frame = -3 
Query:  170 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAV 445
            LKPL DRV I+V EAEE TA G++L +++KEKP  G ++AVG G + + G ++PL +A G+TV+++KY+G +    +GT+Y+ LR S+++A+
Sbjct:    2 LKPLGDRVVIEVLEAEEKTASGIVLPDSAKEKPQSGKIVAVGSGRVLDNGTKEPLEVAEGDTVIFAKYSGTEVT-YEGTDYLILRESDILAI 92
[Close]
BLAST of CX671770 vs. ExPASy Swiss-Prot
Match: CH10_LACRJ (10 kDa chaperonin OS=Lactobacillus reuteri (strain JCM 1112) GN=groS PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.283e-18
Identity = 47/93 (50.54%), Postives = 66/93 (70.97%), Query Frame = -3 
Query:  464 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTV-GKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 739
            +KPLGDRV++K +T EEKT GGI L S  + KP  G+V+AVGEG+T+    KL  +VK G +V++ KYAG E+E+NG   L++   D+V I+E
Sbjct:    2 LKPLGDRVVLKAETEEEKTVGGIVLASNVKEKPTTGKVIAVGEGRTLENGQKLAPAVKEGDRVLFDKYAGNEVEYNGEKFLVVHAKDLVAIVE 94

HSP 2 Score: 74.7146 bits (182), Expect = 8.054e-13
Identity = 37/93 (39.78%), Postives = 58/93 (62.37%), Query Frame = -3 
Query:  167 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 445
            LKPL DRV +K    EE T GG++L    KEKP+ G VIAVG G   E G +   ++  G+ V++ KYAGN+ +  +G  ++ + A +++A++
Sbjct:    2 LKPLGDRVVLKAETEEEKTVGGIVLASNVKEKPTTGKVIAVGEGRTLENGQKLAPAVKEGDRVLFDKYAGNEVE-YNGEKFLVVHAKDLVAIV 93
[Close]
BLAST of CX671770 vs. ExPASy Swiss-Prot
Match: CH10_LACRD (10 kDa chaperonin OS=Lactobacillus reuteri (strain DSM 20016) GN=groS PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.283e-18
Identity = 47/93 (50.54%), Postives = 66/93 (70.97%), Query Frame = -3 
Query:  464 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTV-GKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 739
            +KPLGDRV++K +T EEKT GGI L S  + KP  G+V+AVGEG+T+    KL  +VK G +V++ KYAG E+E+NG   L++   D+V I+E
Sbjct:    2 LKPLGDRVVLKAETEEEKTVGGIVLASNVKEKPTTGKVIAVGEGRTLENGQKLAPAVKEGDRVLFDKYAGNEVEYNGEKFLVVHAKDLVAIVE 94

HSP 2 Score: 74.7146 bits (182), Expect = 8.054e-13
Identity = 37/93 (39.78%), Postives = 58/93 (62.37%), Query Frame = -3 
Query:  167 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 445
            LKPL DRV +K    EE T GG++L    KEKP+ G VIAVG G   E G +   ++  G+ V++ KYAGN+ +  +G  ++ + A +++A++
Sbjct:    2 LKPLGDRVVLKAETEEEKTVGGIVLASNVKEKPTTGKVIAVGEGRTLENGQKLAPAVKEGDRVLFDKYAGNEVE-YNGEKFLVVHAKDLVAIV 93
[Close]
BLAST of CX671770 vs. ExPASy Swiss-Prot
Match: CH10_GEOLS (10 kDa chaperonin OS=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) GN=groS PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.283e-18
Identity = 45/93 (48.39%), Postives = 66/93 (70.97%), Query Frame = -3 
Query:  464 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTK-LDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 739
            ++PL DR++VK    EEKT GG+F+P TA+ KPQ GEV+AVG GK   + K   + VK G  +++ KYAGTE++ +G   L++REDDV+ ++E
Sbjct:    3 LRPLHDRIIVKRLEGEEKTAGGLFIPDTAKEKPQKGEVIAVGNGKKNDEGKCAPLDVKVGDSILFGKYAGTEVKVDGDEFLMMREDDVLAVIE 95

HSP 2 Score: 87.4261 bits (215), Expect = 1.201e-16
Identity = 41/93 (44.09%), Postives = 63/93 (67.74%), Query Frame = -3 
Query:  167 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 445
            L+PL+DR+ +K  E EE TAGGL + + +KEKP  G VIAVG G  ++EG   PL +  G+++++ KYAG + K  DG  ++ +R  +V+AV+
Sbjct:    3 LRPLHDRIIVKRLEGEEKTAGGLFIPDTAKEKPQKGEVIAVGNGKKNDEGKCAPLDVKVGDSILFGKYAGTEVK-VDGDEFLMMREDDVLAVI 94
[Close]
BLAST of CX671770 vs. ExPASy Swiss-Prot
Match: CH10_BACP3 (10 kDa chaperonin OS=Bacillus PS3 GN=groS PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.283e-18
Identity = 44/92 (47.83%), Postives = 66/92 (71.74%), Query Frame = -3 
Query:  467 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGK-TKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGIL 739
            +KPLGDR+++++   EEKT  GI LP TA+ KPQ G VVAVG G+ +    ++    K G +VI+SKYAGTE++++G  +LILRE D++ ++
Sbjct:    2 LKPLGDRIVIEVVETEEKTASGIVLPDTAKEKPQEGRVVAVGAGRVLDNGQRIGRKSKVGDRVIFSKYAGTEVKYDGKEYLILRESDILAVI 93

HSP 2 Score: 83.9593 bits (206), Expect = 1.328e-15
Identity = 43/93 (46.24%), Postives = 61/93 (65.59%), Query Frame = -3 
Query:  167 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 445
            LKPL DR+ I+V E EE TA G++L + +KEKP  G V+AVG G + + G R       G+ V++SKYAG + K  DG  Y+ LR S+++AV+
Sbjct:    2 LKPLGDRIVIEVVETEEKTASGIVLPDTAKEKPQEGRVVAVGAGRVLDNGQRIGRKSKVGDRVIFSKYAGTEVK-YDGKEYLILRESDILAVI 93
[Close]
BLAST of CX671770 vs. ExPASy Swiss-Prot
Match: CH10_BACHK (10 kDa chaperonin OS=Bacillus thuringiensis subsp. konkukian GN=groS PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.283e-18
Identity = 43/92 (46.74%), Postives = 67/92 (72.83%), Query Frame = -3 
Query:  467 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTV-GKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGIL 739
            +KPLGDRV++++   EEKT  GI LP TA+ KPQ G+V+AVG G+ +    ++ + V  G  +I+SKYAGTE+++ G ++LILRE D++ ++
Sbjct:    2 LKPLGDRVVIELVQAEEKTASGIVLPDTAKEKPQEGKVIAVGTGRVLENGERVALEVAAGDLIIFSKYAGTEVKYEGTDYLILRESDILAVI 93

HSP 2 Score: 93.2041 bits (230), Expect = 2.188e-18
Identity = 46/93 (49.46%), Postives = 67/93 (72.04%), Query Frame = -3 
Query:  167 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 445
            LKPL DRV I++ +AEE TA G++L + +KEKP  G VIAVG G + E G R  L +A G+ +++SKYAG + K  +GT+Y+ LR S+++AV+
Sbjct:    2 LKPLGDRVVIELVQAEEKTASGIVLPDTAKEKPQEGKVIAVGTGRVLENGERVALEVAAGDLIIFSKYAGTEVK-YEGTDYLILRESDILAVI 93
[Close]
BLAST of CX671770 vs. ExPASy Swiss-Prot
Match: CH10_BACCZ (10 kDa chaperonin OS=Bacillus cereus (strain ZK / E33L) GN=groS PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.283e-18
Identity = 43/92 (46.74%), Postives = 67/92 (72.83%), Query Frame = -3 
Query:  467 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTV-GKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGIL 739
            +KPLGDRV++++   EEKT  GI LP TA+ KPQ G+V+AVG G+ +    ++ + V  G  +I+SKYAGTE+++ G ++LILRE D++ ++
Sbjct:    2 LKPLGDRVVIELVQAEEKTASGIVLPDTAKEKPQEGKVIAVGTGRVLENGERVALEVAAGDLIIFSKYAGTEVKYEGTDYLILRESDILAVI 93

HSP 2 Score: 93.2041 bits (230), Expect = 2.188e-18
Identity = 46/93 (49.46%), Postives = 67/93 (72.04%), Query Frame = -3 
Query:  167 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 445
            LKPL DRV I++ +AEE TA G++L + +KEKP  G VIAVG G + E G R  L +A G+ +++SKYAG + K  +GT+Y+ LR S+++AV+
Sbjct:    2 LKPLGDRVVIELVQAEEKTASGIVLPDTAKEKPQEGKVIAVGTGRVLENGERVALEVAAGDLIIFSKYAGTEVK-YEGTDYLILRESDILAVI 93
[Close]
BLAST of CX671770 vs. ExPASy Swiss-Prot
Match: CH10_BACCQ (10 kDa chaperonin OS=Bacillus cereus (strain Q1) GN=groS PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.283e-18
Identity = 43/92 (46.74%), Postives = 67/92 (72.83%), Query Frame = -3 
Query:  467 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTV-GKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGIL 739
            +KPLGDRV++++   EEKT  GI LP TA+ KPQ G+V+AVG G+ +    ++ + V  G  +I+SKYAGTE+++ G ++LILRE D++ ++
Sbjct:    2 LKPLGDRVVIELVQAEEKTASGIVLPDTAKEKPQEGKVIAVGTGRVLENGERVALEVAAGDLIIFSKYAGTEVKYEGTDYLILRESDILAVI 93

HSP 2 Score: 93.2041 bits (230), Expect = 2.188e-18
Identity = 46/93 (49.46%), Postives = 67/93 (72.04%), Query Frame = -3 
Query:  167 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 445
            LKPL DRV I++ +AEE TA G++L + +KEKP  G VIAVG G + E G R  L +A G+ +++SKYAG + K  +GT+Y+ LR S+++AV+
Sbjct:    2 LKPLGDRVVIELVQAEEKTASGIVLPDTAKEKPQEGKVIAVGTGRVLENGERVALEVAAGDLIIFSKYAGTEVK-YEGTDYLILRESDILAVI 93
The following BLAST results are available for this feature:
BLAST of CX671770 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH10_LISMF1.283e-1848.3510 kDa chaperonin OS=Listeria monocytogenes seroty... [more]
CH10_LISMC1.283e-1848.3510 kDa chaperonin OS=Listeria monocytogenes seroty... [more]
CH10_LISIN1.283e-1848.3510 kDa chaperonin OS=Listeria innocua GN=groS PE=3... [more]
CH10_LACRJ1.283e-1850.5410 kDa chaperonin OS=Lactobacillus reuteri (strain... [more]
CH10_LACRD1.283e-1850.5410 kDa chaperonin OS=Lactobacillus reuteri (strain... [more]
CH10_GEOLS1.283e-1848.3910 kDa chaperonin OS=Geobacter lovleyi (strain ATC... [more]
CH10_BACP31.283e-1847.8310 kDa chaperonin OS=Bacillus PS3 GN=groS PE=3 SV=... [more]
CH10_BACHK1.283e-1846.7410 kDa chaperonin OS=Bacillus thuringiensis subsp.... [more]
CH10_BACCZ1.283e-1846.7410 kDa chaperonin OS=Bacillus cereus (strain ZK / ... [more]
CH10_BACCQ1.283e-1846.7410 kDa chaperonin OS=Bacillus cereus (strain Q1) G... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_13A11_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-13A11-A21-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671770 ID=CX671770; Name=CX671770; organism=Citrus sinensis; type=EST; length=906bp
TTTTTTTTAAGCAAAAAACAAGCAGCAATTCGATTGATCAAGCTGCAATT
CTTTATGTTCAAATAAGATTACATTCAAAATCCGTATGCCTTGAGGCAAC
TCAACCATAAAATTCAATTCACTAATACATATAAAGCCTCGCTCAAGTAA
ACACAGACAACTAAGAGAGCACAGCCATCACTTCAGAAGCTCTTAAAGCA
ATGTAGTTGGTACCATCACTGCCCTTGAAGTCATTCCCTGCATACTTGGA
ATACATCACCGTGTTCCCTGGAGCAATGGATAGAGGTTTCCTATTACCTT
CCTCATCTAGAGGACCGGGTCCAACAGCAATGACCATTCCAATGGAAGGT
TTCTCCTTGCTTGCCTCCGTCAACAACAAACCTCCAGCAGTTGTCTCCTC
AGCCTCAGCAACCTTGATGAAAACTCTGTCATTAAGGGGCTTAAGATCCT
TGATTTCATCTGTTTCAAGAATGCCAACTACGTCATCCTCCCTCAATATG
AGATGATTTGCGCCATTGAACTCCAACTCAGTCCCTGCATACTTCGAATA
GATGACCTGGGTCCCAGGCTTCACAGATATGTCCAGTTTAGTCTTCCCAA
CTGTCTTCCCCTCGCCAACAGCTACCACCTCACCTGCTTGAGGCTTTGTT
TGAGCTGTAGATGGCAGAAAAATACCACCATCAGTTTTCTCCTCTACAGT
CTTGATTTTCACCAGCACTCTATCACCCAAAGGTTTAATTGAAGTGTACT
TGGGAGCCACGACTGCAGCGGCTTTAACGACCAAGCGACGGAAAGAGCGT
TGGCTGGGAGCACCTCCGACGGAAGCGAACTTGACGGAAGACGGTCTGAG
ACCATCGAATGAAGTCAAGCTCCTTGCTGGAACCTTAATTGATGACGCTG
TTAGCT
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