CX671770
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX671770 vs. ExPASy Swiss-Prot
Match: CH10_BACHD (10 kDa chaperonin OS=Bacillus halodurans GN=groS PE=2 SV=2) HSP 1 Score: 97.8265 bits (242), Expect = 8.884e-20 Identity = 49/92 (53.26%), Postives = 66/92 (71.74%), Query Frame = -3 Query: 467 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGK-TVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGIL 739 +KPLGDRV+++ EEKT GI LP TA+ KPQ G VVAVG G+ T K+ + VK G VI+SKYAGTE++++G +LILRE D++ I+ Sbjct: 2 LKPLGDRVVIEQVETEEKTASGIVLPDTAKEKPQEGRVVAVGTGRVTENGEKIALEVKEGDSVIFSKYAGTEVKYDGKEYLILRESDILAII 93 HSP 2 Score: 88.5817 bits (218), Expect = 5.390e-17 Identity = 43/93 (46.24%), Postives = 63/93 (67.74%), Query Frame = -3 Query: 167 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 445 LKPL DRV I+ E EE TA G++L + +KEKP G V+AVG G + E G + L + G++V++SKYAG + K DG Y+ LR S+++A++ Sbjct: 2 LKPLGDRVVIEQVETEEKTASGIVLPDTAKEKPQEGRVVAVGTGRVTENGEKIALEVKEGDSVIFSKYAGTEVK-YDGKEYLILRESDILAII 93
BLAST of CX671770 vs. ExPASy Swiss-Prot
Match: CH10_TRIEI (10 kDa chaperonin OS=Trichodesmium erythraeum (strain IMS101) GN=groS PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 1.160e-19 Identity = 43/100 (43.00%), Postives = 70/100 (70.00%), Query Frame = -3 Query: 164 TDEIKDLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVLS 463 T + +KPL +RVF+KV+E+EE TAGG+LL +++KEKP +G V++ GPG +++G R + + G+ V+YSKYAG D K G Y+ L +++A+++ Sbjct: 5 TLSVSTVKPLGERVFVKVSESEEKTAGGILLPDSAKEKPQVGEVVSAGPGKRNDDGTRAEMEVKVGDKVLYSKYAGTDIK-LGGDEYVLLAEKDILAIVN 103 HSP 2 Score: 94.7449 bits (234), Expect = 7.521e-19 Identity = 45/94 (47.87%), Postives = 67/94 (71.28%), Query Frame = -3 Query: 467 TSIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGK-TVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGIL 745 +++KPLG+RV VK+ EEKT GGI LP +A+ KPQ GEVV+ G GK T+ ++ VK G +V+YSKYAGT+++ G +++L E D++ I+ Sbjct: 9 STVKPLGERVFVKVSESEEKTAGGILLPDSAKEKPQVGEVVSAGPGKRNDDGTRAEMEVKVGDKVLYSKYAGTDIKLGGDEYVLLAEKDILAIV 102
BLAST of CX671770 vs. ExPASy Swiss-Prot
Match: CH10_SYNPX (10 kDa chaperonin OS=Synechococcus sp. (strain WH8102) GN=groS PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 1.160e-19 Identity = 44/97 (45.36%), Postives = 69/97 (71.13%), Query Frame = -3 Query: 164 IKDLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVLS 454 + +KPL DRVFIKV+E+EE TAGG+LL + +KEKP +G V+ VGPG +++G+R+ + G+ V+YSKYAG D K G ++ L +++A+++ Sbjct: 8 VSTVKPLGDRVFIKVSESEEKTAGGILLPDTAKEKPQVGEVVQVGPGKRNDDGSRQAPEVGVGDKVLYSKYAGTDIK-LGGDEFVLLTEKDILAIVN 103 HSP 2 Score: 89.3521 bits (220), Expect = 3.160e-17 Identity = 45/94 (47.87%), Postives = 63/94 (67.02%), Query Frame = -3 Query: 467 TSIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGK-TVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGIL 745 +++KPLGDRV +K+ EEKT GGI LP TA+ KPQ GEVV VG GK ++ V G +V+YSKYAGT+++ G ++L E D++ I+ Sbjct: 9 STVKPLGDRVFIKVSESEEKTAGGILLPDTAKEKPQVGEVVQVGPGKRNDDGSRQAPEVGVGDKVLYSKYAGTDIKLGGDEFVLLTEKDILAIV 102
BLAST of CX671770 vs. ExPASy Swiss-Prot
Match: CH10_PROMM (10 kDa chaperonin OS=Prochlorococcus marinus (strain MIT 9313) GN=groS PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 1.160e-19 Identity = 45/97 (46.39%), Postives = 69/97 (71.13%), Query Frame = -3 Query: 164 IKDLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVLS 454 + +KPL DRVF+KV+E+EE TAGG+LL + +KEKP +G V+ VGPG +++G+R+ + G+ V+YSKYAG D K S Y+ L +++AV++ Sbjct: 8 VSTVKPLGDRVFVKVSESEEKTAGGILLPDTAKEKPQVGEVVQVGPGKRNDDGSRQAPEVGVGDKVLYSKYAGTDIKLST-DEYVLLSEKDILAVVN 103 HSP 2 Score: 87.8113 bits (216), Expect = 9.193e-17 Identity = 44/94 (46.81%), Postives = 64/94 (68.09%), Query Frame = -3 Query: 467 TSIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGK-TVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGIL 745 +++KPLGDRV VK+ EEKT GGI LP TA+ KPQ GEVV VG GK ++ V G +V+YSKYAGT+++ + +++L E D++ ++ Sbjct: 9 STVKPLGDRVFVKVSESEEKTAGGILLPDTAKEKPQVGEVVQVGPGKRNDDGSRQAPEVGVGDKVLYSKYAGTDIKLSTDEYVLLSEKDILAVV 102
BLAST of CX671770 vs. ExPASy Swiss-Prot
Match: CH10_PROM9 (10 kDa chaperonin OS=Prochlorococcus marinus (strain MIT 9312) GN=groS PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 1.160e-19 Identity = 45/96 (46.88%), Postives = 69/96 (71.88%), Query Frame = -3 Query: 167 IKDLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 454 + +KPL DR+FIKV+ +EE TAGG+LL +++KEKP +G V VGPG L+++G+R+ ++ G+ V+YSKYAG D K G Y+ L +++AV+ Sbjct: 8 VSTVKPLGDRIFIKVSASEEKTAGGILLPDSAKEKPQVGEVAQVGPGKLNDDGSRQTPEVSIGDKVLYSKYAGTDIK-LGGDEYVLLSEKDILAVV 102 HSP 2 Score: 87.8113 bits (216), Expect = 9.193e-17 Identity = 41/94 (43.62%), Postives = 63/94 (67.02%), Query Frame = -3 Query: 467 TSIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGK-TVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGIL 745 +++KPLGDR+ +K+ EEKT GGI LP +A+ KPQ GEV VG GK ++ V G +V+YSKYAGT+++ G +++L E D++ ++ Sbjct: 9 STVKPLGDRIFIKVSASEEKTAGGILLPDSAKEKPQVGEVAQVGPGKLNDDGSRQTPEVSIGDKVLYSKYAGTDIKLGGDEYVLLSEKDILAVV 102
BLAST of CX671770 vs. ExPASy Swiss-Prot
Match: CH10_NOCSJ (10 kDa chaperonin OS=Nocardioides sp. (strain BAA-499 / JS614) GN=groS PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 1.160e-19 Identity = 45/95 (47.37%), Postives = 68/95 (71.58%), Query Frame = -3 Query: 164 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVLS 448 ++KPL DR+ +K +AE+TTA GL++ + +KEKP G V+A+GPG +D+ GNR PL + G+ V+YSKY G + K + G Y+ L A +V+AV+S Sbjct: 4 NIKPLEDRIVVKPLDAEQTTASGLVIPDTAKEKPQEGEVLAIGPGRIDDNGNRVPLDVTVGDKVIYSKYGGTEVKYA-GEEYLILSARDVLAVVS 97 HSP 2 Score: 80.8777 bits (198), Expect = 1.124e-14 Identity = 42/95 (44.21%), Postives = 63/95 (66.32%), Query Frame = -3 Query: 467 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGK---TVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGIL 742 +IKPL DR++VK E+ T G+ +P TA+ KPQ GEV+A+G G+ + LD++V G +VIYSKY GTE+++ G +LIL DV+ ++ Sbjct: 4 NIKPLEDRIVVKPLDAEQTTASGLVIPDTAKEKPQEGEVLAIGPGRIDDNGNRVPLDVTV--GDKVIYSKYGGTEVKYAGEEYLILSARDVLAVV 96
BLAST of CX671770 vs. ExPASy Swiss-Prot
Match: CH10_GEOSL (10 kDa chaperonin OS=Geobacter sulfurreducens GN=groS PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 1.160e-19 Identity = 46/94 (48.94%), Postives = 67/94 (71.28%), Query Frame = -3 Query: 464 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTK-LDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 742 +++PL DR+LVK E KT GGIF+P TA+ KPQ GE+VAVG GK K + + +K G +V++ KYAGT+++ G LI+REDD++G++E Sbjct: 2 NLRPLQDRILVKRIEEETKTAGGIFIPDTAKEKPQRGEIVAVGNGKKTEDGKVIPVDLKVGDKVLFGKYAGTDIKIEGQEFLIMREDDILGVIE 95 HSP 2 Score: 78.1814 bits (191), Expect = 7.284e-14 Identity = 35/94 (37.23%), Postives = 59/94 (62.77%), Query Frame = -3 Query: 167 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 448 +L+PL DR+ +K E E TAGG+ + + +KEKP G ++AVG G E+G P+ + G+ V++ KYAG D K +G ++ +R +++ V+ Sbjct: 2 NLRPLQDRILVKRIEEETKTAGGIFIPDTAKEKPQRGEIVAVGNGKKTEDGKVIPVDLKVGDKVLFGKYAGTDIK-IEGQEFLIMREDDILGVI 94
BLAST of CX671770 vs. ExPASy Swiss-Prot
Match: CH10_GEOSF (10 kDa chaperonin OS=Geobacter sp. (strain FRC-32) GN=groS PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 1.160e-19 Identity = 46/93 (49.46%), Postives = 68/93 (73.12%), Query Frame = -3 Query: 464 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTK-LDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 739 ++P+ DR++VK E KT GGI++P TA+ KPQ GEVVAVG GK K L + VK G +V++ KY+GTE++ G ++LI+REDD++G++E Sbjct: 3 LRPMQDRIIVKRVEEETKTAGGIYIPETAKEKPQEGEVVAVGNGKRTEDGKILPLDVKVGDKVLFGKYSGTEVKVEGQDYLIMREDDILGVIE 95 HSP 2 Score: 79.337 bits (194), Expect = 3.270e-14 Identity = 36/93 (38.71%), Postives = 59/93 (63.44%), Query Frame = -3 Query: 167 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 445 L+P+ DR+ +K E E TAGG+ + E +KEKP G V+AVG G E+G PL + G+ V++ KY+G + K +G +Y+ +R +++ V+ Sbjct: 3 LRPMQDRIIVKRVEEETKTAGGIYIPETAKEKPQEGEVVAVGNGKRTEDGKILPLDVKVGDKVLFGKYSGTEVK-VEGQDYLIMREDDILGVI 94
BLAST of CX671770 vs. ExPASy Swiss-Prot
Match: CH10_CLOTH (10 kDa chaperonin OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=groS PE=1 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 1.160e-19 Identity = 47/93 (50.54%), Postives = 67/93 (72.04%), Query Frame = -3 Query: 464 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 742 +I+PLGDRV+VK+ EE T GI LP +A+ KPQ EVVAVG G V ++ + VK G +VI SKYAGTE++F+G + ILR++D++ ++E Sbjct: 2 NIRPLGDRVVVKMVETEETTKSGIVLPGSAKEKPQVAEVVAVGPGTVVDGKEVKMEVKVGDKVIISKYAGTEVKFDGQEYTILRQNDILAVVE 94 HSP 2 Score: 79.337 bits (194), Expect = 3.270e-14 Identity = 39/94 (41.49%), Postives = 62/94 (65.96%), Query Frame = -3 Query: 167 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 448 +++PL DRV +K+ E EETT G++L ++KEKP + V+AVGPG + +G + + G+ V+ SKYAG + K DG Y LR ++++AV+ Sbjct: 2 NIRPLGDRVVVKMVETEETTKSGIVLPGSAKEKPQVAEVVAVGPGTV-VDGKEVKMEVKVGDKVIISKYAGTEVK-FDGQEYTILRQNDILAVV 93
BLAST of CX671770 vs. ExPASy Swiss-Prot
Match: CH10_CLOBB (10 kDa chaperonin OS=Clostridium botulinum (strain Eklund 17B / Type B) GN=groS PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.515e-19 Identity = 46/92 (50.00%), Postives = 67/92 (72.83%), Query Frame = -3 Query: 464 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 739 IKPLG+RV++K EEKT GI L +A+ PQ EVVAVG G V TK+++ VK G +V+YSKY+GTE++ +G ++IL++DD++ I+E Sbjct: 3 IKPLGNRVVIKKLEAEEKTKSGIVLTGSAKEVPQEAEVVAVGPGSIVDGTKIEMEVKVGDKVLYSKYSGTEVKLDGEEYMILKQDDILAIVE 94 HSP 2 Score: 75.485 bits (184), Expect = 4.722e-13 Identity = 38/93 (40.86%), Postives = 61/93 (65.59%), Query Frame = -3 Query: 167 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 445 +KPL +RV IK EAEE T G++LT ++KE P V+AVGPG + +G + + + G+ V+YSKY+G + K DG Y+ L+ +++A++ Sbjct: 3 IKPLGNRVVIKKLEAEEKTKSGIVLTGSAKEVPQEAEVVAVGPGSI-VDGTKIEMEVKVGDKVLYSKYSGTEVK-LDGEEYMILKQDDILAIV 93 The following BLAST results are available for this feature:
BLAST of CX671770 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX671770 ID=CX671770; Name=CX671770; organism=Citrus sinensis; type=EST; length=906bpback to top |