CX671770

Overview
NameCX671770
Unique NameCX671770
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length906
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11181 contig Csv1_Contig11181:137..1042. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CX671770 vs. ExPASy Swiss-Prot
Match: CH10_CYAP4 (10 kDa chaperonin OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=groS PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 7.521e-19
Identity = 43/98 (43.88%), Postives = 71/98 (72.45%), Query Frame = -3 
Query:  164 IKDLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFK-GSDGTNYIALRASEVMAVLS 454
            +  +KPL DRVF+KV+ +EE TAGG+LL + +KEKP +G ++AVGPG  +++G+R+   +  G+ V+YSKYAG D K G++   Y+ L   +++A+++
Sbjct:    8 VSTVKPLGDRVFVKVSASEEKTAGGILLPDTAKEKPQVGEIVAVGPGKRNDDGSRQEPEVKIGDKVLYSKYAGTDIKLGTE--EYVLLSEKDILAIVA 103

HSP 2 Score: 93.9745 bits (232), Expect = 1.283e-18
Identity = 46/94 (48.94%), Postives = 66/94 (70.21%), Query Frame = -3 
Query:  467 TSIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGK-TVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGIL 745
            +++KPLGDRV VK+   EEKT GGI LP TA+ KPQ GE+VAVG GK     ++ +  VK G +V+YSKYAGT+++     +++L E D++ I+
Sbjct:    9 STVKPLGDRVFVKVSASEEKTAGGILLPDTAKEKPQVGEIVAVGPGKRNDDGSRQEPEVKIGDKVLYSKYAGTDIKLGTEEYVLLSEKDILAIV 102
[Close]
BLAST of CX671770 vs. ExPASy Swiss-Prot
Match: CH10_BACSK (10 kDa chaperonin OS=Bacillus clausii (strain KSM-K16) GN=groS PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 7.521e-19
Identity = 47/92 (51.09%), Postives = 66/92 (71.74%), Query Frame = -3 
Query:  467 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGK-TVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGIL 739
            +KPLGDR++++    EEKT  GI LP +A+ KPQ G+VVAVG G+ T    K+ + VK G  +I+SKYAGTE+++ G  +LILRE DV+ I+
Sbjct:    2 LKPLGDRIIIEQIQSEEKTASGIVLPDSAKEKPQEGKVVAVGTGRVTDNGEKVALEVKEGDSIIFSKYAGTEVKYEGTEYLILRESDVLAII 93

HSP 2 Score: 87.8113 bits (216), Expect = 9.193e-17
Identity = 40/93 (43.01%), Postives = 66/93 (70.97%), Query Frame = -3 
Query:  167 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 445
            LKPL DR+ I+  ++EE TA G++L +++KEKP  G V+AVG G + + G +  L +  G+++++SKYAG + K  +GT Y+ LR S+V+A++
Sbjct:    2 LKPLGDRIIIEQIQSEEKTASGIVLPDSAKEKPQEGKVVAVGTGRVTDNGEKVALEVKEGDSIIFSKYAGTEVK-YEGTEYLILRESDVLAII 93
[Close]
BLAST of CX671770 vs. ExPASy Swiss-Prot
Match: CH10_RHOSR (10 kDa chaperonin OS=Rhodococcus sp. (strain RHA1) GN=groS PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 9.822e-19
Identity = 44/95 (46.32%), Postives = 68/95 (71.58%), Query Frame = -3 
Query:  164 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVLS 448
            ++KPL D++ ++  EAE TTA GL++ + +KEKP  G V+AVG G ++E+GNR P+ +  G+TV+YSKY G + K + G  Y+ L A +V+AV+S
Sbjct:    5 NIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGEGRVNEQGNRIPVDVKEGDTVIYSKYGGTEIKYA-GQEYLILSARDVLAVVS 98

HSP 2 Score: 84.3445 bits (207), Expect = 1.016e-15
Identity = 42/93 (45.16%), Postives = 61/93 (65.59%), Query Frame = -3 
Query:  467 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGK-TKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGIL 742
            +IKPL D++LV+    E  T  G+ +P TA+ KPQ G VVAVGEG+   +  ++ + VK G  VIYSKY GTE+++ G  +LIL   DV+ ++
Sbjct:    5 NIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGEGRVNEQGNRIPVDVKEGDTVIYSKYGGTEIKYAGQEYLILSARDVLAVV 97
[Close]
BLAST of CX671770 vs. ExPASy Swiss-Prot
Match: CH10_RHOOB (10 kDa chaperonin OS=Rhodococcus opacus (strain B4) GN=groS PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 9.822e-19
Identity = 44/95 (46.32%), Postives = 68/95 (71.58%), Query Frame = -3 
Query:  164 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVLS 448
            ++KPL D++ ++  EAE TTA GL++ + +KEKP  G V+AVG G ++E+GNR P+ +  G+TV+YSKY G + K + G  Y+ L A +V+AV+S
Sbjct:    5 NIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGEGRVNEQGNRIPVDVKEGDTVIYSKYGGTEIKYA-GQEYLILSARDVLAVVS 98

HSP 2 Score: 84.3445 bits (207), Expect = 1.016e-15
Identity = 42/93 (45.16%), Postives = 61/93 (65.59%), Query Frame = -3 
Query:  467 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGK-TKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGIL 742
            +IKPL D++LV+    E  T  G+ +P TA+ KPQ G VVAVGEG+   +  ++ + VK G  VIYSKY GTE+++ G  +LIL   DV+ ++
Sbjct:    5 NIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGEGRVNEQGNRIPVDVKEGDTVIYSKYGGTEIKYAGQEYLILSARDVLAVV 97
[Close]
BLAST of CX671770 vs. ExPASy Swiss-Prot
Match: CH10_RHOE4 (10 kDa chaperonin OS=Rhodococcus erythropolis (strain PR4 / NBRC 100887) GN=groS PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 9.822e-19
Identity = 44/95 (46.32%), Postives = 68/95 (71.58%), Query Frame = -3 
Query:  164 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVLS 448
            ++KPL D++ ++  EAE TTA GL++ + +KEKP  G V+AVG G ++E+GNR P+ +  G+TV+YSKY G + K + G  Y+ L A +V+AV+S
Sbjct:    5 NIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGEGRVNEQGNRIPVDVKEGDTVIYSKYGGTEIKYA-GQEYLILSARDVLAVVS 98

HSP 2 Score: 84.3445 bits (207), Expect = 1.016e-15
Identity = 42/93 (45.16%), Postives = 61/93 (65.59%), Query Frame = -3 
Query:  467 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGK-TKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGIL 742
            +IKPL D++LV+    E  T  G+ +P TA+ KPQ G VVAVGEG+   +  ++ + VK G  VIYSKY GTE+++ G  +LIL   DV+ ++
Sbjct:    5 NIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGEGRVNEQGNRIPVDVKEGDTVIYSKYGGTEIKYAGQEYLILSARDVLAVV 97
[Close]
BLAST of CX671770 vs. ExPASy Swiss-Prot
Match: CH10_PROA2 (10 kDa chaperonin OS=Prosthecochloris aestuarii (strain DSM 271 / SK 413) GN=groS PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 9.822e-19
Identity = 45/94 (47.87%), Postives = 65/94 (69.15%), Query Frame = -3 
Query:  464 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTK-LDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 742
            ++KPL DRV+VK    EEKT GG+++P T + KPQ GE+VAVG GK     + L++ V  G +V+Y KY+GTE+   G ++LI+RE D+  IL+
Sbjct:    2 NLKPLADRVIVKPAPAEEKTKGGLYIPDTGKEKPQYGEIVAVGTGKVAENGQVLEMQVNIGQKVLYGKYSGTEVTVEGEDYLIMRESDIFAILD 95

HSP 2 Score: 80.1073 bits (196), Expect = 1.917e-14
Identity = 39/94 (41.49%), Postives = 58/94 (61.70%), Query Frame = -3 
Query:  167 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 448
            +LKPL DRV +K A AEE T GGL + +  KEKP  G ++AVG G + E G    + +  G  V+Y KY+G +    +G +Y+ +R S++ A+L
Sbjct:    2 NLKPLADRVIVKPAPAEEKTKGGLYIPDTGKEKPQYGEIVAVGTGKVAENGQVLEMQVNIGQKVLYGKYSGTEVT-VEGEDYLIMRESDIFAIL 94
[Close]
BLAST of CX671770 vs. ExPASy Swiss-Prot
Match: CH10_LACAC (10 kDa chaperonin OS=Lactobacillus acidophilus GN=groS PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 9.822e-19
Identity = 48/91 (52.75%), Postives = 63/91 (69.23%), Query Frame = -3 
Query:  470 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGK-TVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGI 739
            ++P+GDRV+VK+K  EEKT GGI L S A+ KP  GEVVAVGEG  T    KL + VK G  V+Y KY+GT +E+ G  +L+L E D++ I
Sbjct:    2 LQPIGDRVIVKVKEEEEKTVGGIVLASNAKQKPTEGEVVAVGEGAYTSNGDKLPMVVKKGDVVLYDKYSGTNVEYEGEKYLVLHEKDILAI 92

HSP 2 Score: 79.337 bits (194), Expect = 3.270e-14
Identity = 35/92 (38.04%), Postives = 59/92 (64.13%), Query Frame = -3 
Query:  170 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAV 445
            L+P+ DRV +KV E EE T GG++L   +K+KP+ G V+AVG G     G++ P+ +  G+ V+Y KY+G + +  +G  Y+ L   +++A+
Sbjct:    2 LQPIGDRVIVKVKEEEEKTVGGIVLASNAKQKPTEGEVVAVGEGAYTSNGDKLPMVVKKGDVVLYDKYSGTNVE-YEGEKYLVLHEKDILAI 92
[Close]
BLAST of CX671770 vs. ExPASy Swiss-Prot
Match: CH10_CLONN (10 kDa chaperonin OS=Clostridium novyi (strain NT) GN=groS PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 9.822e-19
Identity = 45/92 (48.91%), Postives = 66/92 (71.74%), Query Frame = -3 
Query:  464 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 739
            IKPLGDRV++K    EEKT  GI LP +A+ KPQ  E+VAVG G  V   ++ + VK G +V++SKY+GTE++ +G  + ILR++D++ I+E
Sbjct:    3 IKPLGDRVVIKRLEAEEKTKSGIVLPGSAKEKPQEAEIVAVGPGGLVDGKEVRMEVKVGDKVLFSKYSGTEVKLDGEEYTILRQNDILAIVE 94

HSP 2 Score: 75.8702 bits (185), Expect = 3.615e-13
Identity = 39/93 (41.94%), Postives = 60/93 (64.52%), Query Frame = -3 
Query:  167 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 445
            +KPL DRV IK  EAEE T  G++L  ++KEKP    ++AVGPG L  +G    + +  G+ V++SKY+G + K  DG  Y  LR ++++A++
Sbjct:    3 IKPLGDRVVIKRLEAEEKTKSGIVLPGSAKEKPQEAEIVAVGPGGL-VDGKEVRMEVKVGDKVLFSKYSGTEVK-LDGEEYTILRQNDILAIV 93
[Close]
BLAST of CX671770 vs. ExPASy Swiss-Prot
Match: CH10_CLOBO (10 kDa chaperonin OS=Clostridium botulinum GN=groS PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 9.822e-19
Identity = 44/92 (47.83%), Postives = 67/92 (72.83%), Query Frame = -3 
Query:  464 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 739
            IKPLGDRV++K    EEKT  GI LP +A+ KPQ  E+VAVG G  V   ++++ VK G +V++S+YAG E++ +G  ++ILR++D++ I+E
Sbjct:    3 IKPLGDRVVIKRLEAEEKTKSGIVLPGSAKEKPQEAEIVAVGPGGLVDGKEVNMEVKVGDRVLFSQYAGNEVKIDGEEYIILRQNDILAIVE 94

HSP 2 Score: 79.7221 bits (195), Expect = 2.504e-14
Identity = 41/93 (44.09%), Postives = 62/93 (66.67%), Query Frame = -3 
Query:  167 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 445
            +KPL DRV IK  EAEE T  G++L  ++KEKP    ++AVGPG L  +G    + +  G+ V++S+YAGN+ K  DG  YI LR ++++A++
Sbjct:    3 IKPLGDRVVIKRLEAEEKTKSGIVLPGSAKEKPQEAEIVAVGPGGL-VDGKEVNMEVKVGDRVLFSQYAGNEVK-IDGEEYIILRQNDILAIV 93
[Close]
BLAST of CX671770 vs. ExPASy Swiss-Prot
Match: CH10_BACWK (10 kDa chaperonin OS=Bacillus weihenstephanensis (strain KBAB4) GN=groS PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 9.822e-19
Identity = 44/92 (47.83%), Postives = 67/92 (72.83%), Query Frame = -3 
Query:  467 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTV-GKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGIL 739
            +KPLGDRV++++   EEKT  GI LP TA+ KPQ G+V+AVG G+ +    ++ + V  G  +I+SKYAGTE+++ G ++LILRE D++ I+
Sbjct:    2 LKPLGDRVVIELVQAEEKTASGIVLPETAKEKPQEGKVIAVGTGRVLENGERVALEVAAGDLIIFSKYAGTEVKYEGTDYLILRESDILAII 93

HSP 2 Score: 93.9745 bits (232), Expect = 1.283e-18
Identity = 46/93 (49.46%), Postives = 67/93 (72.04%), Query Frame = -3 
Query:  167 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 445
            LKPL DRV I++ +AEE TA G++L E +KEKP  G VIAVG G + E G R  L +A G+ +++SKYAG + K  +GT+Y+ LR S+++A++
Sbjct:    2 LKPLGDRVVIELVQAEEKTASGIVLPETAKEKPQEGKVIAVGTGRVLENGERVALEVAAGDLIIFSKYAGTEVK-YEGTDYLILRESDILAII 93
The following BLAST results are available for this feature:
BLAST of CX671770 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH10_CYAP47.521e-1943.8810 kDa chaperonin OS=Cyanothece sp. (strain PCC 74... [more]
CH10_BACSK7.521e-1951.0910 kDa chaperonin OS=Bacillus clausii (strain KSM-... [more]
CH10_RHOSR9.822e-1946.3210 kDa chaperonin OS=Rhodococcus sp. (strain RHA1)... [more]
CH10_RHOOB9.822e-1946.3210 kDa chaperonin OS=Rhodococcus opacus (strain B4... [more]
CH10_RHOE49.822e-1946.3210 kDa chaperonin OS=Rhodococcus erythropolis (str... [more]
CH10_PROA29.822e-1947.8710 kDa chaperonin OS=Prosthecochloris aestuarii (s... [more]
CH10_LACAC9.822e-1952.7510 kDa chaperonin OS=Lactobacillus acidophilus GN=... [more]
CH10_CLONN9.822e-1948.9110 kDa chaperonin OS=Clostridium novyi (strain NT)... [more]
CH10_CLOBO9.822e-1947.8310 kDa chaperonin OS=Clostridium botulinum GN=groS... [more]
CH10_BACWK9.822e-1947.8310 kDa chaperonin OS=Bacillus weihenstephanensis (... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_13A11_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-13A11-A21-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671770 ID=CX671770; Name=CX671770; organism=Citrus sinensis; type=EST; length=906bp
TTTTTTTTAAGCAAAAAACAAGCAGCAATTCGATTGATCAAGCTGCAATT
CTTTATGTTCAAATAAGATTACATTCAAAATCCGTATGCCTTGAGGCAAC
TCAACCATAAAATTCAATTCACTAATACATATAAAGCCTCGCTCAAGTAA
ACACAGACAACTAAGAGAGCACAGCCATCACTTCAGAAGCTCTTAAAGCA
ATGTAGTTGGTACCATCACTGCCCTTGAAGTCATTCCCTGCATACTTGGA
ATACATCACCGTGTTCCCTGGAGCAATGGATAGAGGTTTCCTATTACCTT
CCTCATCTAGAGGACCGGGTCCAACAGCAATGACCATTCCAATGGAAGGT
TTCTCCTTGCTTGCCTCCGTCAACAACAAACCTCCAGCAGTTGTCTCCTC
AGCCTCAGCAACCTTGATGAAAACTCTGTCATTAAGGGGCTTAAGATCCT
TGATTTCATCTGTTTCAAGAATGCCAACTACGTCATCCTCCCTCAATATG
AGATGATTTGCGCCATTGAACTCCAACTCAGTCCCTGCATACTTCGAATA
GATGACCTGGGTCCCAGGCTTCACAGATATGTCCAGTTTAGTCTTCCCAA
CTGTCTTCCCCTCGCCAACAGCTACCACCTCACCTGCTTGAGGCTTTGTT
TGAGCTGTAGATGGCAGAAAAATACCACCATCAGTTTTCTCCTCTACAGT
CTTGATTTTCACCAGCACTCTATCACCCAAAGGTTTAATTGAAGTGTACT
TGGGAGCCACGACTGCAGCGGCTTTAACGACCAAGCGACGGAAAGAGCGT
TGGCTGGGAGCACCTCCGACGGAAGCGAACTTGACGGAAGACGGTCTGAG
ACCATCGAATGAAGTCAAGCTCCTTGCTGGAACCTTAATTGATGACGCTG
TTAGCT
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