CX671756
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX671756 vs. ExPASy Swiss-Prot
Match: EF1A_PYRAR (Elongation factor 1-alpha OS=Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321) GN=tuf PE=3 SV=1) HSP 1 Score: 167.162 bits (422), Expect = 1.063e-40 Identity = 81/177 (45.76%), Postives = 120/177 (67.80%), Query Frame = -3 Query: 274 RVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVE 804 RVETGVLK G V P +V+S+E HH L++A PGDNVG NV+ + +D+KRG V + P ++++++ HP IG GYAPV+ HT+ + V+ +EL++K+D R+G+ +E++P+F+K GD +VK+ P KP+V E FSD+PPLGRFA+RDM +T+A G I V+ Sbjct: 262 RVETGVLKAGDRVVVVPPAKVGDVRSIETHHMKLEQAQPGDNVGVNVRGINKEDVKRGDVLGKVDNIPT-VTEEIIARIVVLWHPTAIGPGYAPVMHIHTATVPVQITELISKLDPRTGQAVEQKPQFIKQGDVAIVKIKPLKPVVAEKFSDFPPLGRFALRDMGRTIAAGQILEVK 437
BLAST of CX671756 vs. ExPASy Swiss-Prot
Match: EF1A_NANEQ (Elongation factor 1-alpha OS=Nanoarchaeum equitans GN=tuf PE=3 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 1.814e-40 Identity = 84/183 (45.90%), Postives = 123/183 (67.21%), Query Frame = -3 Query: 268 RVETGVLKPG----MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEKK 804 RVETG LKPG ++ + P+G EVKS+EMHH+ L+EALPGDN+GF+V+ + D+ RG VA + D+P A + + ++ HP I GYAPVL HT+H+ V+F EL K++ +G+ +E+ P+ L+ G+A +VK+ P KP+V+E F P LGRFA+RDM +TVA+G+ + V K Sbjct: 246 RVETGKLKPGDKIIVLPSKKPNGAIGEVKSIEMHHKPLEEALPGDNIGFSVRGIEKGDVMRGDVAGHL-DNPPTVAEEIVALIHVIYHPSAITVGYAPVLHVHTAHVPVRFEELRGKVNPATGQVIEENPQALRPGEAAVVKLKPLKPVVIEPFDKIPQLGRFAIRDMGRTVAIGIARQVTPK 427
BLAST of CX671756 vs. ExPASy Swiss-Prot
Match: EF1A_UNCMA (Elongation factor 1-alpha OS=Uncultured methanogenic archaeon RC-I GN=tuf PE=3 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 4.041e-40 Identity = 80/183 (43.72%), Postives = 115/183 (62.84%), Query Frame = -3 Query: 268 RVETGVLKPGMVVTFGPS----GLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEKK 804 RVETG++K G V F P G EVKS+EMHHE + +ALPGDN+GFNV+ + ++RG V + P A F +QV+++ HP I GY PV CHT+ +A ++++ +D ++G E+ P F+K GDA +V + PT+P+V+E + P LGRFA+RDM QTVA GV+ + K Sbjct: 245 RVETGIMKKGDKVIFRPGIDGVGHAGEVKSIEMHHEEIPQALPGDNIGFNVRGIEKNLIRRGDVCGHVDKQPT-VAVEFKAQVVVLQHPSAITAGYTPVFHCHTAQVACTLTQILATLDPKTGGVKEQNPPFIKTGDAAIVLIRPTRPLVIEKVKEIPQLGRFAIRDMGQTVAAGVVMDITPK 426
BLAST of CX671756 vs. ExPASy Swiss-Prot
Match: EF1A_HALWD (Elongation factor 1-alpha OS=Haloquadratum walsbyi (strain DSM 16790) GN=tuf PE=3 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 6.893e-40 Identity = 81/179 (45.25%), Postives = 115/179 (64.25%), Query Frame = -3 Query: 268 RVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEKK 804 RVETG + PG V+F PS + EVK+VEMHHE + +A PGDNVGFNV+ + D++RG V S + P A F +QV++M HP I GY PV HT+ +A + K+D SG+ E++P F+K+GDA +V + P KP+ +E ++ P LG FAVRDM QT+A G + V+++ Sbjct: 244 RVETGTVSPGDDVSFQPSDVGGEVKTVEMHHEEVDQAGPGDNVGFNVRGIGKDDIRRGDVCGPSSNAPT-VAETFKAQVVVMQHPSVITAGYTPVFHAHTAQVACTIESIDQKLDPASGEVAEEDPDFIKSGDAAVVTVRPQKPLSIEPSNEIPELGSFAVRDMGQTIAAGKVLEVDER 421
BLAST of CX671756 vs. ExPASy Swiss-Prot
Match: EF1A_PYRIL (Elongation factor 1-alpha OS=Pyrobaculum islandicum (strain DSM 4184 / JCM 9189) GN=tuf PE=3 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 1.176e-39 Identity = 81/177 (45.76%), Postives = 120/177 (67.80%), Query Frame = -3 Query: 274 RVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVE 804 RVETGVLK G V P +V+S+E HH L++A PGDN+G NV+ ++ +D++RG V + P A ++V+I+ HP IG GYAPV+ HT+ + V+ ELV+K+D R+G+ +E++P+F+K GD +VK+ P KP+V E FS++P LGRFA+RDM +T+A G I V+ Sbjct: 262 RVETGVLKVGDRVVIVPPAKVGDVRSIETHHMKLEQAQPGDNIGVNVRGISKEDVRRGDVLGKVDNVPT-VAEEIVARVVILWHPTAIGPGYAPVMHIHTATVPVQIVELVSKLDPRTGQAVEQKPQFIKQGDVAIVKIKPLKPVVAEKFSEFPALGRFALRDMGRTIAAGQIIEVK 437
BLAST of CX671756 vs. ExPASy Swiss-Prot
Match: EF1A_HALSA (Elongation factor 1-alpha OS=Halobacterium salinarium GN=tuf PE=3 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 5.835e-39 Identity = 80/178 (44.94%), Postives = 113/178 (63.48%), Query Frame = -3 Query: 271 RVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEK 804 R+ETGV+ G V+F PS + EVK++EMHHE + A PGDNVGFNV+ + D++RG V + DDP A F +QV++M HP I GY PV HT+ +A + K+D SG+ E+ P F+++GDA +V + P KP+ +E S+ P LG FAVRDM QT+A G + V++ Sbjct: 244 RIETGVMNTGDNVSFQPSDVGGEVKTIEMHHEEVPNAEPGDNVGFNVRGIGKDDIRRGDVCGPA-DDPPSVADTFQAQVVVMQHPSVITAGYTPVFHAHTAQVACTIESIDKKMDPASGETQEENPDFIQSGDAAVVTVRPQKPLSLEPSSEIPELGSFAVRDMGQTIAAGKVLDVDE 420
BLAST of CX671756 vs. ExPASy Swiss-Prot
Match: EF1A_HALS3 (Elongation factor 1-alpha OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=tuf PE=3 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 5.835e-39 Identity = 80/178 (44.94%), Postives = 113/178 (63.48%), Query Frame = -3 Query: 271 RVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEK 804 R+ETGV+ G V+F PS + EVK++EMHHE + A PGDNVGFNV+ + D++RG V + DDP A F +QV++M HP I GY PV HT+ +A + K+D SG+ E+ P F+++GDA +V + P KP+ +E S+ P LG FAVRDM QT+A G + V++ Sbjct: 244 RIETGVMNTGDNVSFQPSDVGGEVKTIEMHHEEVPNAEPGDNVGFNVRGIGKDDIRRGDVCGPA-DDPPSVADTFQAQVVVMQHPSVITAGYTPVFHAHTAQVACTIESIDKKMDPASGETQEENPDFIQSGDAAVVTVRPQKPLSLEPSSEIPELGSFAVRDMGQTIAAGKVLDVDE 420
BLAST of CX671756 vs. ExPASy Swiss-Prot
Match: EF1A_CALMQ (Elongation factor 1-alpha OS=Caldivirga maquilingensis (strain DSMZ 13496 / IC-167) GN=tuf PE=3 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 9.316e-37 Identity = 75/177 (42.37%), Postives = 114/177 (64.41%), Query Frame = -3 Query: 274 RVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVE 804 RVE+GV+K G + P +V+S+E HH L+EA GDNVG NV+ +DLKRG V + + P A +++ ++ HP IG GY PV+ HT+ + + EL++++D +G+ +E++P+F+K GD MV++ P KP+VVE FSD P LGRF++RDM +TVA G I ++ Sbjct: 261 RVESGVVKVGDTIVALPPAKVGDVRSIETHHMKLEEAKAGDNVGINVRGFERQDLKRGDVVGHLNNPPT-VAEEIVARIAVLEHPTTIGVGYTPVMHVHTATVPTQIIELISRLDPATGQTVEQKPQFIKRGDVAMVRLKPLKPVVVERFSDLPALGRFSLRDMGRTVAAGQIIEIK 436
BLAST of CX671756 vs. ExPASy Swiss-Prot
Match: ERF3_ZYGRO (Eukaryotic peptide chain release factor GTP-binding subunit OS=Zygosaccharomyces rouxii GN=SUP35 PE=3 SV=2) HSP 1 Score: 97.8265 bits (242), Expect = 7.923e-20 Identity = 52/179 (29.05%), Postives = 102/179 (56.98%), Query Frame = -3 Query: 274 RVETGVLKPGMVVTFGPSGLTTEVKSVEMHHE-ALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVG-VIKSVE 804 ++E+G ++ G P+ + E++++ E + A+ G+ V +K V +D+ GFV ++ K+ P + F +QV I+ + +G++ V+ HT+ V+ ++L+ K++R + ++ +K P F K G + + +P+ VET+ DYP LGRF +RD T+A+G ++K +E Sbjct: 485 KIESGHIRKGHSTLLMPNKIPVEIQNIYNETENEVDMAICGEQVKLKIKGVEEEDIAPGFVLTSPKN-PVKNVTRFVAQVAIVELKSILSSGFSCVMHVHTAIEEVRITKLLHKLERGTNRKSKKPPAFAKKGMKIIAVLETERPVCVETYQDYPQLGRFTLRDQGTTIAIGKIVKIIE 662
BLAST of CX671756 vs. ExPASy Swiss-Prot
Match: ERF3_CANMA (Eukaryotic peptide chain release factor GTP-binding subunit OS=Candida maltosa GN=SUP35 PE=3 SV=2) HSP 1 Score: 97.8265 bits (242), Expect = 7.923e-20 Identity = 56/176 (31.82%), Postives = 99/176 (56.25%), Query Frame = -3 Query: 286 RVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEA---LPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVI 804 ++E+G +K G + P+ EV ++ ++E QEA G+ V +K V +DL+ G+V ++ K+ P + F +Q+ I+ + NG++ V+ HT+ VKF EL K+++ + ++ +K P F K G + + ++P+ ET+ DYP LGRF +RD T+A+G I Sbjct: 536 KIESGHVKKGTNLILMPNKTPVEVLTI--YNETEQEADTAFSGEQVRLKIKGVEEEDLQPGYVLTSPKN-PVKTVTKFEAQIAIVELKSILSNGFSCVMHLHTAIEEVKFVELKHKLEKGTNRKSKKPPAFAKKGMKIIAILEVSEPVCAETYKDYPQLGRFTLRDQGTTIAIGKI 708 The following BLAST results are available for this feature:
BLAST of CX671756 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 178
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX671756 ID=CX671756; Name=CX671756; organism=Citrus sinensis; type=EST; length=845bpback to top |